Rorug04G0188000

Leucine Rich repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0018608
Physical Location & Seq
Reverse (-)
32677691 .. 32684872
7182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0188000.1

Sequence Viewer

Length: 2847 bp
ATGGAGAAATCTTGTAGTCTGCTAGTTCATTTTGATAAAGGAACACCCGCAATTGCAAATGAGATCAGGGAAGCTCTTGAAGGCAATGATGTAGAGGCAAAGATAGATGCAATGAAGAAGGCGATCATGCTTTTGTTGAATGGTGAAACGTTGCCTCAGCTTTTTATCACCATTGTTAGATACGTTTTGCCTTCTGAGGACCACACTGTCCAGAAACTACTGCTGTTATATTTGGAGATAATTGAGAAAACTGATGCAAAGGGTAGAGTCTTACCTGAAATGATTCTAATTTGCCAAAATTTGAGGAACAACCTACAGCACCCCAATGAGTATATCCGTGGTGTAACTCTAAGGTTTCTTTGCCGGTTGAACGAGACCGAGATAATTGAGCCATTAATCCCTTCTGTATTGCAGAATTTGGAGCATAGGCACCCTTATATTAGGAGAAATGCTATATTAGCTATGATGTCCATATACAAGCTACCACAGGGTGAGCAAATTTTGGTTGATGCACCTGAAATGATCGAGAAGCTTCTTTCGACGGAGCAGGATCCATCTGCTAAGCGGAATGCGTTTCTCATGCTCTTCACTTGTGCCCAGGACCGTGCAGTTAATTATCTTTTGACCAATGTTGATAAGGTTTCTGAATGGGGTGAATTGCTGCAGATGATTGTGTTAGACCTGATACGGAAAGTGTGCAGGACAAATCGTGGAGAGAAGGGGAGGTACATTAAGATCATTATATCCTTATTGAATGTGCCTTCAACTGCAGTTGTTTATGAATGTGCTGGGACACTCGTTTCCTTGTCATATGCTCCTACTGCTATTAGAGCTGCTGCCAACACCTACTGTCAGCTTCTTCTTTCTCAGAGTGACAACAATGTGAAGCTTATTGTTCTTGATCGGCTGAATGAGCTAAAGTCTTCTCATAGAGAAGTTATGGCTGATATGTTCATGGACATTCTTAGGGCACTTTCTAGTCCAAATCTTGACGTCCGTAGGAAGACCCTAGATATTGTTCTTGAGCTGGTTACTAACCGGAACATAAATGAGGTTGTTCTTACATTGAAAAAGGAAGTTGTTAAGACTCAAAATGGAGAGCTAGAGAAGAATGGTGAATACAGGCAGATGCTTATTCAGGCCATTCATTCTTGTGCAGTAAAGTTCCCGGAAGTTGCAAGCACAGTGGTCCATTTGTTGATGGATTTCTTGGGAGACAGCAATGTTGCTTCAGCTACTGATGTGATTGTGTTTGTTCGGGAGATAATTGAAACCAATCCTAAACTAAGGGTATCTATAATAACAAGGCTATTGGACACGTTTTACCAAATCCGAGCATCACGTGTTTGTGCTTGTGCTCTTTGGATTATTGGAGAGTACTGCCTATCACTTTCTGAAGTTGAAAGTGGACTTGCAACAATTAAGCAGTGTCTTGGAGAATTGCCTTTTTACTCGCTCTCAGAAGAAGAAGAAGGTAATGATTCTTCAAAGAAGGTTCAGCAAGTAAACTCCATGACTGTGTCTTCTAAAAGACCAGCTATTCTTTCTGATGGGACTTATGCCACACAGAGTGCTGCATCTGAAACTGCTTTCTCCCCACCTACCCTTGTTCATGGATCCTTGGCATCTGGGAACTTGAGATCCCTGCTTCTCACTGGTGACTATTTTCTTGGGGCAGTTGTTGCTTGCACACTGACCAAGCTTGTTCTGAGACTGGAAGAGGTTCAGCCATCTAAGGTGGAAGTGCATAAAGCATCTGCACAAGCACTGTTGATAATTGTCTCTATGCTGCAATTAGGCCAATCTCCGGTCCTTCCACATCCAATTGACAACGATTCATATGATAGGATGGTCCTCTGCATAAGATTGTTATGCAATACTGGTGATGAGATAAAGAAAATATGGCTGCAATCTTGCCGTCAAAGTTTTGTTAGTATGCTTACAGAAAAACAATTAAGGGAAACTGCGGAAATCAAAGCAAAGGCTCAGATTTCTCATGCACAGCCGGATGACCTTATTGACTTCTACCATTTAAAAAGCAGGAAGGGTATGAGCCAACTGGAACTCGAAGATGAGGTCCAAGATGATTTAAAACGTGCTACAGGAGAGTTCATCAAGGAAGGAGATGATGCAAACAAGCTCAACCGAATTCTCCAGCTCACTGGATTTAGCGACCCAGTGTATGCCGAAGCATATGTGACTGTACATCATTATGATATTGTCCTTGATGTCACAGTTATCAATCGAACCAAGGAGACCTTACAAAATTTGTGCTTGGAGTTGGCAACTATGGGGGATCTTAAGCTTGTTGAGCGGCCACAGAATTATACTCTGGCTCCTGAATCTAGTAAAAAAATAAAAGCCAACATCAAGGTGTCCTCAACTGAGACTGGAGTAATATTTGGAAATATTGTTTATGAGACCTCGAATGTGCATGAGCGAACAGTTGTTGTCCTCAACGATATTCATATCGACATTATGGATTACATCTCTCCTGCTGTTTGTAGTGATGGAGCTTTCAGAACCATGTGGGCAGAATTTGAGTGGGAGAACAAGGTTGCTGTCAACACAGTAATTCAAGACGAGAAGGAATTTCTCGACCATATCATGAAATCAACTAACATGAAGTGCCTCACTGCACCATCGGCCTTGGATGGTGAGTGTGGATTCTTGGCAGCTAACTTGTATGCAAAGAGTGTGTTTGGAGAGGATGCCTTGGTGAATGTGAGCATTGAAAAGCAAGTGGATGGAAAGCTTAGTGGGTACATCCGGATAAGGAGCAAGACCCAGGGAATTGCCCTCAGTTTGGGCGATAAGATTACTCTTAAGCAGAAGGGAGGCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_6

Protein Analysis

948

Amino Acids

106.07

Weight (kDa)

5.68

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 18 - 467 1.6e-95 Adaptin N terminal region
Cnd1 PF12717 112 - 261 6.5e-06 non-SMC mitotic condensation complex subunit 1
Coatamer_beta_C PF07718 669 - 807 2.8e-56 Coatomer beta C-terminal region
Coatomer_b_Cpla PF14806 813 - 940 1.7e-56 Coatomer beta subunit appendage platform
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AatII GACGTC 1 cut(s) 996
AccB1I GGYRCC 1 cut(s) 429
AccBSI CCGCTC 1 cut(s) 2314
AccIII TCCGGA 1 cut(s) 2769
AciI CCGC 4 cut(s) 48, 565, 1967, 2314
AclI AACGTT 1 cut(s) 149
AclWI GGATC 6 cut(s) 545, 558, 1611, 1624, 1635, 2304
AcoI YGGCCR 1 cut(s) 2315
AcsI RAATTY 7 cut(s) 298, 415, 498, 2148, 2266, 2537, 2591
AcuI CTGAAG 2 cut(s) 1215, 1416
AcvI CACGTG 1 cut(s) 1343
AcyI GRCGYC 1 cut(s) 993
AdeI CACNNNGTG 2 cut(s) 491, 1571
AfaI GTAC 4 cut(s) 728, 1379, 2205, 2765
AfiI CCNNNNNNNGG 2 cut(s) 1807, 2806
AflII CTTAAG 2 cut(s) 2300, 2825
AflIII ACRYGT 2 cut(s) 1317, 1342
AjnI CCWGG 2 cut(s) 597, 2787
AloI GAACNNNNNNTCC 2 cut(s) 1625, 1657
Alw21I GWGCWC 1 cut(s) 1360
Alw26I GTCTC 7 cut(s) 368, 1209, 1705, 1786, 2249, 2381, 2414
AlwI GGATC 6 cut(s) 545, 558, 1611, 1624, 1635, 2304
AlwNI CAGNNNCTG 1 cut(s) 1238
Aor13HI TCCGGA 1 cut(s) 2769
AoxI GGCC 4 cut(s) 1140, 1798, 2315, 2646
ApeKI GCWGC 7 cut(s) 661, 833, 836, 1574, 1789, 1906, 2675
ApoI RAATTY 7 cut(s) 298, 415, 498, 2148, 2266, 2537, 2591
ArsI GACNNNNNNTTYG 2 cut(s) 2061, 2093
AseI ATTAAT 1 cut(s) 395
Asp700I GAANNNNTTC 2 cut(s) 282, 1722
AspS9I GGNCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
AsuC2I CCSGG 1 cut(s) 1169
AsuHPI GGTGA 9 cut(s) 155, 160, 503, 665, 1127, 1670, 1895, 2669, 2731
AvaII GGWCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
BaeGI GKGCMC 2 cut(s) 598, 973
BamHI GGATCC 2 cut(s) 550, 1616
BanI GGYRCC 1 cut(s) 429
BarI GAAGNNNNNNTAC 4 cut(s) 710, 742, 1468, 1500
BbrPI CACGTG 1 cut(s) 1343
BbsI GAAGAC 3 cut(s) 915, 1010, 1515
Bbv12I GWGCWC 1 cut(s) 1360
BbvCI CCTCAGC 1 cut(s) 156
BbvI GCAGC 7 cut(s) 648, 820, 823, 1561, 1776, 1893, 2687
BccI CCATC 9 cut(s) 562, 1195, 1544, 1738, 1843, 2504, 2648, 2650, 2741
BceAI ACGGC 1 cut(s) 1902
BciT130I CCWGG 2 cut(s) 599, 2789
BcnI CCSGG 1 cut(s) 1169
BcoDI GTCTC 7 cut(s) 368, 1209, 1705, 1786, 2249, 2381, 2414
BfaI CTAG 5 cut(s) 23, 978, 1010, 1103, 2346
BfmI CTRYAG 4 cut(s) 314, 662, 768, 2100
BfrI CTTAAG 2 cut(s) 2300, 2825
BisI GCNGC 8 cut(s) 662, 834, 837, 1575, 1790, 1907, 2315, 2676
BlpI GCTNAGC 1 cut(s) 561
BlsI GCNGC 8 cut(s) 663, 835, 838, 1576, 1791, 1908, 2316, 2677
BmcAI AGTACT 1 cut(s) 1379
Bme1390I CCNGG 3 cut(s) 599, 1169, 2789
Bme18I GGWCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
BmgT120I GGNCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
BmiI GGNNCC 4 cut(s) 431, 552, 1618, 2337
BmrFI CCNGG 3 cut(s) 599, 1169, 2789
BmrI ACTGGG 1 cut(s) 2171
BmuI ACTGGG 1 cut(s) 2171
BpiI GAAGAC 3 cut(s) 915, 1010, 1515
BpmI CTGGAG 2 cut(s) 2138, 2412
Bpu10I CCTNAGC 1 cut(s) 156
Bpu1102I GCTNAGC 1 cut(s) 561
BpuEI CTTGAG 2 cut(s) 1043, 1657
BpuMI CCSGG 1 cut(s) 1169
BsaAI YACGTR 1 cut(s) 1343
BsaHI GRCGYC 1 cut(s) 993
BsaI GGTCTC 3 cut(s) 368, 2249, 2414
BsaJI CCNNGG 8 cut(s) 337, 597, 1620, 2250, 2649, 2715, 2787, 2788
BsaWI WCCGGW 3 cut(s) 1038, 1807, 2769
BsaXI ACNNNNNCTCC 2 cut(s) 2320, 2350
Bsc4I CCNNNNNNNGG 2 cut(s) 1807, 2806
Bse118I RCCGGY 1 cut(s) 363
Bse1I ACTGG 7 cut(s) 1660, 1719, 1885, 2064, 2167, 2177, 2395
Bse3DI GCAATG 3 cut(s) 91, 117, 1228
BseAI TCCGGA 1 cut(s) 2769
BseBI CCWGG 2 cut(s) 599, 2789
BseDI CCNNGG 8 cut(s) 337, 597, 1620, 2250, 2649, 2715, 2787, 2788
BseGI GGATG 7 cut(s) 1819, 1854, 2014, 2659, 2716, 2752, 2766
BseLI CCNNNNNNNGG 2 cut(s) 1807, 2806
BseMI GCAATG 3 cut(s) 91, 117, 1228
BseMII CTCAG 8 cut(s) 170, 186, 881, 1473, 1700, 2000, 2376, 2815
BseNI ACTGG 7 cut(s) 1660, 1719, 1885, 2064, 2167, 2177, 2395
BseSI GKGCMC 2 cut(s) 598, 973
BseXI GCAGC 7 cut(s) 648, 820, 823, 1561, 1776, 1893, 2687
BseYI CCCAGC 1 cut(s) 788
BsgI GTGCAG 5 cut(s) 627, 718, 1176, 1743, 2622
BshFI GGCC 4 cut(s) 1142, 1800, 2317, 2648
BshNI GGYRCC 1 cut(s) 429
BsiHKAI GWGCWC 1 cut(s) 1360
BsiSI CCGG 6 cut(s) 364, 1039, 1169, 1808, 2006, 2770
BslFI GGGAC 2 cut(s) 805, 1567
BslI CCNNNNNNNGG 2 cut(s) 1807, 2806
BsmAI GTCTC 7 cut(s) 368, 1209, 1705, 1786, 2249, 2381, 2414
BsmFI GGGAC 2 cut(s) 805, 1567
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 4 cut(s) 1142, 1800, 2317, 2648
Bso31I GGTCTC 3 cut(s) 368, 2249, 2414
Bsp1286I GDGCHC 3 cut(s) 598, 973, 1360
Bsp13I TCCGGA 1 cut(s) 2769
Bsp1407I TGTACA 1 cut(s) 2203
Bsp143I GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
Bsp1720I GCTNAGC 1 cut(s) 561
BspACI CCGC 4 cut(s) 48, 565, 1967, 2314
BspANI GGCC 4 cut(s) 1142, 1800, 2317, 2648
BspCNI CTCAG 8 cut(s) 169, 187, 880, 1472, 1701, 1999, 2377, 2814
BspEI TCCGGA 1 cut(s) 2769
BspHI TCATGA 1 cut(s) 2607
BspLI GGNNCC 4 cut(s) 431, 552, 1618, 2337
BspMAI CTGCAG 2 cut(s) 666, 772
BspPI GGATC 6 cut(s) 545, 558, 1611, 1624, 1635, 2304
BspQI GCTCTTC 1 cut(s) 590
BspT107I GGYRCC 1 cut(s) 429
BspTI CTTAAG 2 cut(s) 2300, 2825
BspTNI GGTCTC 3 cut(s) 368, 2249, 2414
BsrBI CCGCTC 1 cut(s) 2314
BsrDI GCAATG 3 cut(s) 91, 117, 1228
BsrFI RCCGGY 1 cut(s) 363
BsrGI TGTACA 1 cut(s) 2203
BsrI ACTGG 7 cut(s) 1660, 1719, 1885, 2064, 2167, 2177, 2395
BssAI RCCGGY 1 cut(s) 363
BssECI CCNNGG 8 cut(s) 337, 597, 1620, 2250, 2649, 2715, 2787, 2788
BssMI GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
BssNI GRCGYC 1 cut(s) 993
BssT1I CCWWGG 4 cut(s) 1620, 2250, 2649, 2715
Bst2UI CCWGG 2 cut(s) 599, 2789
Bst6I CTCTTC 2 cut(s) 590, 1713
BstACI GRCGYC 1 cut(s) 993
BstAFI CTTAAG 2 cut(s) 2300, 2825
BstAPI GCANNNNNTGC 1 cut(s) 1682
BstAUI TGTACA 1 cut(s) 2203
BstBAI YACGTR 1 cut(s) 1343
BstC8I GCNNGC 2 cut(s) 1180, 1687
BstDSI CCRYGG 1 cut(s) 337
BstF5I GGATG 7 cut(s) 1819, 1854, 2014, 2659, 2716, 2752, 2766
BstKTI GATC 9 cut(s) 66, 126, 525, 553, 738, 904, 1619, 1643, 2299
BstMAI GTCTC 7 cut(s) 368, 1209, 1705, 1786, 2249, 2381, 2414
BstMBI GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
BstMWI GCNNNNNNNGC 7 cut(s) 458, 821, 830, 913, 1682, 2311, 2645
BstNI CCWGG 2 cut(s) 599, 2789
BstSCI CCNGG 3 cut(s) 597, 1167, 2787
BstSFI CTRYAG 4 cut(s) 314, 662, 768, 2100
BstSLI GKGCMC 2 cut(s) 598, 973
BstV1I GCAGC 7 cut(s) 648, 820, 823, 1561, 1776, 1893, 2687
BstV2I GAAGAC 3 cut(s) 915, 1010, 1515
BstX2I RGATCY 4 cut(s) 550, 1616, 1640, 2296
BstXI CCANNNNNNTGG 1 cut(s) 2162
BstYI RGATCY 4 cut(s) 550, 1616, 1640, 2296
BsuRI GGCC 4 cut(s) 1142, 1800, 2317, 2648
BtgI CCRYGG 1 cut(s) 337
BtsCI GGATG 7 cut(s) 1819, 1854, 2014, 2659, 2716, 2752, 2766
BtsI GCAGTG 2 cut(s) 1433, 2634
BtsIMutI CAGTG 9 cut(s) 204, 1191, 1433, 1653, 1691, 1766, 2160, 2184, 2634
Cac8I GCNNGC 2 cut(s) 1180, 1687
CaiI CAGNNNCTG 1 cut(s) 1238
CciI TCATGA 1 cut(s) 2607
Cfr10I RCCGGY 1 cut(s) 363
Cfr13I GGNCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
Csp6I GTAC 4 cut(s) 727, 1378, 2204, 2764
CspCI CAANNNNNGTGG 2 cut(s) 1167, 1202
CviQI GTAC 4 cut(s) 727, 1378, 2204, 2764
DpnI GATC 9 cut(s) 65, 125, 524, 552, 737, 903, 1618, 1642, 2298
DpnII GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
DraI TTTAAA 2 cut(s) 2034, 2091
DraIII CACNNNGTG 2 cut(s) 491, 1571
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 1 cut(s) 2315
Eam1104I CTCTTC 2 cut(s) 590, 1713
EarI CTCTTC 2 cut(s) 590, 1713
Eco130I CCWWGG 4 cut(s) 1620, 2250, 2649, 2715
Eco31I GGTCTC 3 cut(s) 368, 2249, 2414
Eco47I GGWCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
Eco57I CTGAAG 2 cut(s) 1215, 1416
Eco72I CACGTG 1 cut(s) 1343
EcoRI GAATTC 1 cut(s) 2148
EcoRII CCWGG 2 cut(s) 597, 2787
EcoT14I CCWWGG 4 cut(s) 1620, 2250, 2649, 2715
ErhI CCWWGG 4 cut(s) 1620, 2250, 2649, 2715
FalI AAGNNNNNCTT 2 cut(s) 2243, 2275
FaqI GGGAC 2 cut(s) 805, 1567
FauI CCCGC 1 cut(s) 55
FauNDI CATATG 3 cut(s) 811, 1840, 2194
Fnu4HI GCNGC 8 cut(s) 662, 834, 837, 1575, 1790, 1907, 2315, 2676
FokI GGATG 7 cut(s) 1806, 1861, 2021, 2666, 2723, 2753, 2759
Fsp4HI GCNGC 8 cut(s) 662, 834, 837, 1575, 1790, 1907, 2315, 2676
FspBI CTAG 5 cut(s) 23, 978, 1010, 1103, 2346
GluI GCNGC 8 cut(s) 662, 834, 837, 1575, 1790, 1907, 2315, 2676
GsaI CCCAGC 1 cut(s) 792
GsuI CTGGAG 2 cut(s) 2138, 2412
HaeIII GGCC 4 cut(s) 1142, 1800, 2317, 2648
HapII CCGG 6 cut(s) 364, 1039, 1169, 1808, 2006, 2770
Hin1I GRCGYC 1 cut(s) 993
HincII GTYRAC 1 cut(s) 2566
HindII GTYRAC 1 cut(s) 2566
HindIII AAGCTT 5 cut(s) 530, 887, 1700, 2303, 2753
HinfI GANTC 7 cut(s) 267, 283, 1087, 1481, 1835, 2342, 2667
HpaII CCGG 6 cut(s) 364, 1039, 1169, 1808, 2006, 2770
HphI GGTGA 9 cut(s) 155, 160, 503, 665, 1127, 1670, 1895, 2669, 2731
Hpy166II GTNNAC 3 cut(s) 1409, 1507, 2566
Hpy8I GTNNAC 3 cut(s) 1409, 1507, 2566
Hpy99I CGWCG 1 cut(s) 544
HpyCH4IV ACGT 6 cut(s) 149, 183, 993, 1319, 1342, 2095
HpyF10VI GCNNNNNNNGC 7 cut(s) 458, 821, 830, 913, 1682, 2311, 2645
HpySE526I ACGT 6 cut(s) 149, 183, 993, 1319, 1342, 2095
Hsp92I GRCGYC 1 cut(s) 993
Kpn2I TCCGGA 1 cut(s) 2769
Kzo9I GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
LguI GCTCTTC 1 cut(s) 590
LmnI GCTCC 6 cut(s) 421, 544, 820, 2341, 2513, 2778
Lsp1109I GCAGC 7 cut(s) 648, 820, 823, 1561, 1776, 1893, 2687
MaeI CTAG 5 cut(s) 23, 978, 1010, 1103, 2346
MaeII ACGT 6 cut(s) 149, 183, 993, 1319, 1342, 2095
MaeIII GTNAC 6 cut(s) 343, 872, 1030, 1658, 2197, 2230
MalI GATC 9 cut(s) 65, 125, 524, 552, 737, 903, 1618, 1642, 2298
MbiI CCGCTC 1 cut(s) 2314
MboI GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
MfeI CAATTG 2 cut(s) 51, 1824
MflI RGATCY 4 cut(s) 550, 1616, 1640, 2296
MhlI GDGCHC 3 cut(s) 598, 973, 1360
MlyI GAGTC 2 cut(s) 276, 1081
MroI TCCGGA 1 cut(s) 2769
MroXI GAANNNNTTC 2 cut(s) 282, 1722
MslI CAYNNNNRTG 5 cut(s) 324, 1152, 1517, 2211, 2372
MspCI CTTAAG 2 cut(s) 2300, 2825
MspI CCGG 6 cut(s) 364, 1039, 1169, 1808, 2006, 2770
MspR9I CCNGG 3 cut(s) 599, 1169, 2789
MunI CAATTG 2 cut(s) 51, 1824
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 2 cut(s) 599, 2789
MwoI GCNNNNNNNGC 7 cut(s) 458, 821, 830, 913, 1682, 2311, 2645
NciI CCSGG 1 cut(s) 1169
NdeI CATATG 3 cut(s) 811, 1840, 2194
NdeII GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
NlaIV GGNNCC 4 cut(s) 431, 552, 1618, 2337
NmuCI GTSAC 4 cut(s) 872, 1658, 2197, 2230
PagI TCATGA 1 cut(s) 2607
PasI CCCWGGG 1 cut(s) 2788
PciSI GCTCTTC 1 cut(s) 590
PctI GAATGC 1 cut(s) 574
PdmI GAANNNNTTC 2 cut(s) 282, 1722
PfeI GAWTC 5 cut(s) 283, 1481, 1835, 2342, 2667
PflFI GACNNNGTC 1 cut(s) 1519
PfoI TCCNGGA 1 cut(s) 1167
PkrI GCNGC 8 cut(s) 663, 835, 838, 1576, 1791, 1908, 2316, 2677
PleI GAGTC 2 cut(s) 275, 1081
PmaCI CACGTG 1 cut(s) 1343
PmlI CACGTG 1 cut(s) 1343
PpsI GAGTC 2 cut(s) 275, 1081
Ppu21I YACGTR 1 cut(s) 1343
PshBI ATTAAT 1 cut(s) 395
Psp1406I AACGTT 1 cut(s) 149
Psp6I CCWGG 2 cut(s) 597, 2787
PspCI CACGTG 1 cut(s) 1343
PspFI CCCAGC 1 cut(s) 788
PspGI CCWGG 2 cut(s) 597, 2787
PspN4I GGNNCC 4 cut(s) 431, 552, 1618, 2337
PspPI GGNCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
PstI CTGCAG 2 cut(s) 666, 772
PstNI CAGNNNCTG 1 cut(s) 1238
PsuI RGATCY 4 cut(s) 550, 1616, 1640, 2296
PsyI GACNNNGTC 1 cut(s) 1519
RsaI GTAC 4 cut(s) 728, 1379, 2205, 2765
RsaNI GTAC 4 cut(s) 727, 1378, 2204, 2764
RseI CAYNNNNRTG 5 cut(s) 324, 1152, 1517, 2211, 2372
SapI GCTCTTC 1 cut(s) 590
SatI GCNGC 8 cut(s) 662, 834, 837, 1575, 1790, 1907, 2315, 2676
Sau3AI GATC 9 cut(s) 63, 123, 522, 550, 735, 901, 1616, 1640, 2296
Sau96I GGNCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
ScaI AGTACT 1 cut(s) 1379
SchI GAGTC 2 cut(s) 276, 1081
ScrFI CCNGG 3 cut(s) 599, 1169, 2789
SduI GDGCHC 3 cut(s) 598, 973, 1360
SfcI CTRYAG 4 cut(s) 314, 662, 768, 2100
SinI GGWCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
SmiMI CAYNNNNRTG 5 cut(s) 324, 1152, 1517, 2211, 2372
SmlI CTYRAG 4 cut(s) 1022, 1636, 2300, 2825
SmoI CTYRAG 4 cut(s) 1022, 1636, 2300, 2825
SsiI CCGC 4 cut(s) 48, 565, 1967, 2314
SspI AATATT 2 cut(s) 2400, 2410
SspMI CTAG 5 cut(s) 23, 978, 1010, 1103, 2346
StyD4I CCNGG 3 cut(s) 597, 1167, 2787
StyI CCWWGG 4 cut(s) 1620, 2250, 2649, 2715
TaiI ACGT 6 cut(s) 152, 186, 996, 1322, 1345, 2098
TaqI TCGA 7 cut(s) 525, 539, 2067, 2245, 2426, 2472, 2598
TaqII GACCGA 1 cut(s) 392
TatI WGTACW 2 cut(s) 1377, 2203
TauI GCSGC 1 cut(s) 2317
TfiI GAWTC 5 cut(s) 283, 1481, 1835, 2342, 2667
TscAI CASTG 9 cut(s) 211, 1191, 1433, 1660, 1698, 1773, 2167, 2184, 2641
TseFI GTSAC 4 cut(s) 872, 1658, 2197, 2230
TseI GCWGC 7 cut(s) 661, 833, 836, 1574, 1789, 1906, 2675
Tsp45I GTSAC 4 cut(s) 872, 1658, 2197, 2230
TspGWI ACGGA 4 cut(s) 326, 557, 703, 986
TspRI CASTG 9 cut(s) 211, 1191, 1433, 1660, 1698, 1773, 2167, 2184, 2641
Tth111I GACNNNGTC 1 cut(s) 1519
Vha464I CTTAAG 2 cut(s) 2300, 2825
VpaK11BI GGWCC 6 cut(s) 199, 601, 1189, 1810, 1852, 2077
VspI ATTAAT 1 cut(s) 395
XapI RAATTY 7 cut(s) 298, 415, 498, 2148, 2266, 2537, 2591
XmnI GAANNNNTTC 2 cut(s) 282, 1722
XspI CTAG 5 cut(s) 23, 978, 1010, 1103, 2346
ZraI GACGTC 1 cut(s) 994
ZrmI AGTACT 1 cut(s) 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.