No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0120861 RchiOBHm_Chr6g0286981 |
| rosa_multiflora | Rmu_sc0000621.1_g000013 Rmu_sc0001336.1_g000024 Rmu_sc0003286.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00046530 Rroxscaffold_3G00267300 Rroxscaffold_6G00397470 Rroxscaffold_6G00398440 |
| rosa_samantha | Rh2BG189800 Rh2BG214300 Rh3BG126400 Rh6AG063500 Rh7CG162900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 1 cut(s) | 125 |
| AluI | AGCT | 1 cut(s) | 125 |
| AoxI | GGCC | 1 cut(s) | 41 |
| AspLEI | GCGC | 1 cut(s) | 54 |
| BccI | CCATC | 1 cut(s) | 148 |
| BfaI | CTAG | 2 cut(s) | 69, 86 |
| BfmI | CTRYAG | 1 cut(s) | 120 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 136 |
| Bse1I | ACTGG | 1 cut(s) | 44 |
| BseGI | GGATG | 1 cut(s) | 140 |
| BseNI | ACTGG | 1 cut(s) | 44 |
| BshFI | GGCC | 1 cut(s) | 43 |
| BslFI | GGGAC | 4 cut(s) | 64, 93, 122, 151 |
| BsmFI | GGGAC | 4 cut(s) | 64, 93, 122, 151 |
| BsnI | GGCC | 1 cut(s) | 43 |
| BspANI | GGCC | 1 cut(s) | 43 |
| BsrI | ACTGG | 1 cut(s) | 44 |
| Bst4CI | ACNGT | 1 cut(s) | 30 |
| BstC8I | GCNNGC | 1 cut(s) | 56 |
| BstF5I | GGATG | 1 cut(s) | 140 |
| BstHHI | GCGC | 1 cut(s) | 54 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 49, 131 |
| BstNSI | RCATGY | 1 cut(s) | 58 |
| BstSFI | CTRYAG | 1 cut(s) | 120 |
| BsuRI | GGCC | 1 cut(s) | 43 |
| BtsCI | GGATG | 1 cut(s) | 140 |
| Cac8I | GCNNGC | 1 cut(s) | 56 |
| CfoI | GCGC | 1 cut(s) | 54 |
| CseI | GACGC | 1 cut(s) | 138 |
| CviAII | CATG | 1 cut(s) | 55 |
| CviJI | RGCY | 2 cut(s) | 43, 125 |
| CviKI_1 | RGCY | 2 cut(s) | 43, 125 |
| FaeI | CATG | 1 cut(s) | 58 |
| FaiI | YATR | 1 cut(s) | 56 |
| FaqI | GGGAC | 4 cut(s) | 64, 93, 122, 151 |
| FatI | CATG | 1 cut(s) | 54 |
| FokI | GGATG | 1 cut(s) | 127 |
| FspBI | CTAG | 2 cut(s) | 69, 86 |
| GlaI | GCGC | 1 cut(s) | 53 |
| HaeIII | GGCC | 1 cut(s) | 43 |
| HgaI | GACGC | 1 cut(s) | 138 |
| HhaI | GCGC | 1 cut(s) | 54 |
| Hin1II | CATG | 1 cut(s) | 58 |
| Hin6I | GCGC | 1 cut(s) | 52 |
| HinP1I | GCGC | 1 cut(s) | 52 |
| HincII | GTYRAC | 1 cut(s) | 33 |
| HindII | GTYRAC | 1 cut(s) | 33 |
| Hpy166II | GTNNAC | 1 cut(s) | 33 |
| Hpy188I | TCNGA | 1 cut(s) | 145 |
| Hpy188III | TCNNGA | 2 cut(s) | 115, 173 |
| Hpy8I | GTNNAC | 1 cut(s) | 33 |
| HpyAV | CCTTC | 2 cut(s) | 92, 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 30 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 49, 131 |
| Hsp92II | CATG | 1 cut(s) | 58 |
| HspAI | GCGC | 1 cut(s) | 52 |
| LpnPI | CCDG | 4 cut(s) | 57, 83, 128, 141 |
| LweI | GCATC | 1 cut(s) | 136 |
| MaeI | CTAG | 2 cut(s) | 69, 86 |
| MnlI | CCTC | 1 cut(s) | 33 |
| MseI | TTAA | 1 cut(s) | 17 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 49, 131 |
| NlaIII | CATG | 1 cut(s) | 58 |
| NspI | RCATGY | 1 cut(s) | 58 |
| PaeI | GCATGC | 1 cut(s) | 58 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 55, 108 |
| SaqAI | TTAA | 1 cut(s) | 17 |
| SetI | ASST | 3 cut(s) | 70, 91, 127 |
| SfaNI | GCATC | 1 cut(s) | 136 |
| SfcI | CTRYAG | 1 cut(s) | 120 |
| SphI | GCATGC | 1 cut(s) | 58 |
| SspMI | CTAG | 2 cut(s) | 69, 86 |
| TaaI | ACNGT | 1 cut(s) | 30 |
| Tru1I | TTAA | 1 cut(s) | 17 |
| Tru9I | TTAA | 1 cut(s) | 17 |
| XceI | RCATGY | 1 cut(s) | 58 |
| XspI | CTAG | 2 cut(s) | 69, 86 |