RchiOBHm_Chr7g0195701

Translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0002846
Physical Location & Seq
Forward (+)
13497405 .. 13503153
5749 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17503

Sequence Viewer

Length: 2154 bp
ATGGCGTGGAGAGAGCTTACCAAAAAGGGCATACGTGCCAGTTTAAATACTGATTTGACTGCAAGACTACGAAGATATGCAGTGGGATTTACTTCTTTATCTAATGTTGATGATGTAGTAAAATCAGTTTTGTATACACCAGAGCCCTCATTTAAATTAAAGTTACGGAAGCTTGTTTATGGTGAAATATTGATAAAAGACACCCAAATACGATGCTATCATGGGAGAAAAGGGAATGACCAGTCATTTGGTTTAAAAGCTCCCAAGAGAGAGAAGTTTGTAAAGAGGGACAATAAGACACAGCCTCCTGTTGATGCTCCATATGTGCCTCCTAAACCACAAAGAACTACCAAGGCCATGCCAGATAAGACAATTGAGATTTTTGAAGGTATGACAATTGATGAACTTGCCAAGCGCACTGGACAGTCAATATCTACTCTGCAAACCATTCTTACAAATGTTGGGGAAAAGGTTGGCTCGGAGTTTGATACTCTCAGCATCGACATTGCAGAGCTGGTTGCAATGGAAGTTGGGGTCAATGTGAGGAGGCTGCACTCCAATGAAGGTACAGAAATTCTACCACGACCTCCAGTTGTAACTGTCATGGGCCATGTTGACCATGGGAAAACTTCACTTTTGGATGCTCTACGTCAGACATCTGTGGCTGCCAAAGAAGCTGGAGGGATTACTCAGCATGTTGGTGCTTTTGTTGTTGGCATGACATCTGGAGCATCAATTACATTTCTTGACACCCCTGGTCATGCAGCATTTAGTGCGATGCGAGCTAGAGGAGCTGCTGTCACAGATATAGTTGTGCTTGTTGTAGCTGCTGATGATGGGGTGATGCCTCAGACTCTTGAAGCCATGGCCCATGCAAAGGCAGCTAAAGTACCAATTGTTGTTGCAATTAATAAATGTGATAAACCAGCTGCTAACGCAGAAAAGGTAAGACTCCAGCTTGCGTCGGAGGGCTTGCTGCTAGAGGATATGGGTGGGGATGTTCAGGTTGTTGAGGTTTCAGCTATGAAGAAGACTGGTTTAGATAACTTGGAGGAGGCTTTGCTTCTCCAGGCTGAGATGATGGATCTGAAAGCTTGTATTGATGGACCGGCTCAAGCTTATGTGGTGGAAGCAAGACTTGATAGGGGAAAGGGTCCATTGGTTACTGCAATAGTGAAAGCAGGAACTTTAATTTGTGGGAAATATGTGGTCGTGGGCTCCGAGTGGGGTAGAATAAGGGCTATTAGGGACATGGCAGGGAAGTCGACAGAGCGGGCAACACCTGCTATGCCAGTTGAGATTGAAGGCCTGAAGGGACTTCCAAGGGCTGGAGATGATATCATTGTTGTGGAATCCGAGGAGCGAGCTAGAATGCTTAGTGCAGGGAGGAAAAGGAAGTTCGAGAAAGATAGACTCATGAAAATTATGGATGGAAGGGTAGAAGATCCAGAAACAGAACCATCAGATGAGGCGCCCAAGCGGGTTGAATTGCCGATAATAGTAAAAGGGGATGTGCAGGGTACTGTCCAAGCTGTTACAGATGCATTAGGGAGTTTAAATAGTCCTCAGGTTTTTGTGAATGTGGTACATGTTGGTGTTGGGTCGCTATCTCAGTCTGACGTGGACATGGCACAAGCCTGTGGTGCATGTATTATTGGATTTAACATCAAGGCTCCACCCAGTTCCATCAGTTTGGCTGCATCTCGAGCCAATATCAAGATAATGCAACACCGTGTGATCTATCATCTTTTGGACGACATTGGGAACTTTATAGTTGAGAAGGCCCCTGGGACTACTGAGACCAAGGTTGCTGGGGAAGCCGAGGTTCTTAGTATTTTTGAGCTCAAAGGAAGGAGCAAGTCTAAGGGACCTGATGTGAAGATTGCCGGATGCCGGGTGGTTGATGGTTTTGTCACCAAATCGGCAACCCTGAGGCTTCTTAGGAGTGGGGAAGTTGTATTTGAGGGATCATGTGAATCGCTTAAGCGGGAGAAACAGGATGTGGACACGGTAAAGAAGGGGAGTGAGTGTGGACTGGTGATCCGAAATTGCTACGATTTCCAGGTTGGTGACATGGTCCAGTGCTTACAGCAAGTTATAAGGAAGCCCAAATTCATTTCATCGGAGAGTGGTGCTGTTCGAATTGAGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GTP_EFTU IF-2

Protein Analysis

717

Amino Acids

77.46

Weight (kDa)

8.52

Isoelectric Point (pI)

35.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 199 - 355 3.7e-33 Elongation factor Tu GTP binding domain
MMR_HSR1 PF01926 199 - 305 1.5e-09 50S ribosome-binding GTPase
FeoB_N PF02421 199 - 353 4.7e-06 Ferrous iron transport protein B
EF-G_D2 PF22042 370 - 449 3.9e-19 Elongation factor G domain 2
IF-2 PF11987 493 - 587 2.4e-28 Translation-initiation factor 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2099
AarI CACCTGC 1 cut(s) 1291
Acc36I ACCTGC 1 cut(s) 1291
AccB1I GGYRCC 1 cut(s) 1471
AccB7I CCANNNNNTGG 1 cut(s) 1328
AccBSI CCGCTC 1 cut(s) 1273
AccI GTMKAC 2 cut(s) 134, 1265
AciI CCGC 3 cut(s) 1273, 1480, 1987
AclWI GGATC 4 cut(s) 1092, 1439, 1975, 2035
AcsI RAATTY 2 cut(s) 573, 2111
AcuI CTGAAG 1 cut(s) 1331
AcyI GRCGYC 1 cut(s) 1472
AdeI CACNNNGTG 1 cut(s) 1735
AfaI GTAC 4 cut(s) 568, 891, 1522, 1587
AfiI CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
AflII CTTAAG 1 cut(s) 1982
AflIII ACRYGT 1 cut(s) 1588
AgsI TTSAA 4 cut(s) 386, 860, 1304, 1487
AjiI CACGTC 1 cut(s) 1621
AjnI CCWGG 4 cut(s) 754, 1068, 1786, 2061
Alw21I GWGCWC 1 cut(s) 1845
Alw26I GTCTC 1 cut(s) 1793
AlwI GGATC 4 cut(s) 1092, 1439, 1975, 2035
Ama87I CYCGRG 1 cut(s) 1704
AoxI GGCC 5 cut(s) 354, 607, 867, 1306, 1782
ApeKI GCWGC 9 cut(s) 550, 665, 764, 794, 827, 881, 929, 976, 1697
ApoI RAATTY 2 cut(s) 573, 2111
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
AseI ATTAAT 1 cut(s) 909
AspLEI GCGC 2 cut(s) 417, 1474
AspS9I GGNCC 7 cut(s) 607, 868, 1106, 1154, 1783, 1868, 2077
AsuC2I CCSGG 1 cut(s) 1895
AsuHPI GGTGA 5 cut(s) 194, 853, 1906, 2050, 2081
AsuII TTCGAA 1 cut(s) 2140
AvaI CYCGRG 1 cut(s) 1704
AvaII GGWCC 4 cut(s) 1106, 1154, 1868, 2077
AxyI CCTNAGG 2 cut(s) 1566, 1931
BanI GGYRCC 1 cut(s) 1471
BanII GRGCYC 3 cut(s) 147, 1220, 1845
BbsI GAAGAC 1 cut(s) 1037
Bbv12I GWGCWC 1 cut(s) 1845
BbvI GCAGC 9 cut(s) 537, 652, 776, 781, 814, 893, 916, 963, 1684
BccI CCATC 7 cut(s) 830, 1075, 1097, 1424, 1468, 1694, 1898
BcgI CGANNNNNNTGC 2 cut(s) 1245, 1279
BciT130I CCWGG 4 cut(s) 756, 1070, 1788, 2063
BcnI CCSGG 1 cut(s) 1895
BcoDI GTCTC 1 cut(s) 1793
BfaI CTAG 3 cut(s) 786, 980, 1368
BfoI RGCGCY 1 cut(s) 1475
BfrI CTTAAG 1 cut(s) 1982
BfuAI ACCTGC 1 cut(s) 1291
BisI GCNGC 9 cut(s) 551, 666, 765, 795, 828, 882, 930, 977, 1698
BlsI GCNGC 9 cut(s) 552, 667, 766, 796, 829, 883, 931, 978, 1699
Bme1390I CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
Bme18I GGWCC 4 cut(s) 1106, 1154, 1868, 2077
BmeT110I CYCGRG 1 cut(s) 1704
BmgBI CACGTC 1 cut(s) 1621
BmgT120I GGNCC 7 cut(s) 607, 868, 1106, 1154, 1783, 1868, 2077
BmiI GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
BmrFI CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
BmrI ACTGGG 1 cut(s) 1674
BmuI ACTGGG 1 cut(s) 1674
BpiI GAAGAC 1 cut(s) 1037
BpmI CTGGAG 6 cut(s) 573, 699, 747, 938, 1052, 1350
Bpu14I TTCGAA 1 cut(s) 2140
BpuEI CTTGAG 1 cut(s) 1098
BpuMI CCSGG 1 cut(s) 1895
BsaAI YACGTR 1 cut(s) 35
BsaHI GRCGYC 1 cut(s) 1472
BsaI GGTCTC 1 cut(s) 1793
BsaXI ACNNNNNCTCC 6 cut(s) 289, 319, 783, 813, 2014, 2044
Bsc4I CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
Bse118I RCCGGY 1 cut(s) 1108
Bse1I ACTGG 9 cut(s) 39, 241, 424, 590, 1039, 1292, 1680, 2040, 2080
Bse21I CCTNAGG 2 cut(s) 1566, 1931
Bse3DI GCAATG 2 cut(s) 504, 528
BseBI CCWGG 4 cut(s) 756, 1070, 1788, 2063
BseGI GGATG 6 cut(s) 646, 1003, 1435, 1516, 1895, 2005
BseLI CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
BseMI GCAATG 2 cut(s) 504, 528
BseMII CTCAG 8 cut(s) 508, 704, 863, 1065, 1580, 1625, 1788, 1922
BseNI ACTGG 9 cut(s) 39, 241, 424, 590, 1039, 1292, 1680, 2040, 2080
BseRI GAGGAG 4 cut(s) 559, 804, 1067, 1373
BseXI GCAGC 9 cut(s) 537, 652, 776, 781, 814, 893, 916, 963, 1684
BseYI CCCAGC 1 cut(s) 1811
BsgI GTGCAG 3 cut(s) 536, 1401, 1535
BshFI GGCC 5 cut(s) 356, 609, 869, 1308, 1784
BshNI GGYRCC 1 cut(s) 1471
BsiHKAI GWGCWC 1 cut(s) 1845
BsiHKCI CYCGRG 1 cut(s) 1704
BsiSI CCGG 3 cut(s) 1109, 1887, 1894
BslFI GGGAC 5 cut(s) 302, 1262, 1329, 1804, 1881
BslI CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
BsmAI GTCTC 1 cut(s) 1793
BsmFI GGGAC 5 cut(s) 302, 1262, 1329, 1804, 1881
BsmI GAATGC 1 cut(s) 1377
BsnI GGCC 5 cut(s) 356, 609, 869, 1308, 1784
Bso31I GGTCTC 1 cut(s) 1793
BsoBI CYCGRG 1 cut(s) 1704
Bsp119I TTCGAA 1 cut(s) 2140
Bsp1286I GDGCHC 3 cut(s) 147, 1220, 1845
Bsp143I GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
Bsp19I CCATGG 2 cut(s) 619, 864
BspACI CCGC 3 cut(s) 1273, 1480, 1987
BspANI GGCC 5 cut(s) 356, 609, 869, 1308, 1784
BspCNI CTCAG 8 cut(s) 507, 703, 862, 1066, 1579, 1624, 1789, 1923
BspHI TCATGA 1 cut(s) 1416
BspLI GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
BspMI ACCTGC 1 cut(s) 1291
BspPI GGATC 4 cut(s) 1092, 1439, 1975, 2035
BspT104I TTCGAA 1 cut(s) 2140
BspT107I GGYRCC 1 cut(s) 1471
BspTI CTTAAG 1 cut(s) 1982
BspTNI GGTCTC 1 cut(s) 1793
BsrBI CCGCTC 1 cut(s) 1273
BsrDI GCAATG 2 cut(s) 504, 528
BsrFI RCCGGY 1 cut(s) 1108
BsrI ACTGG 9 cut(s) 39, 241, 424, 590, 1039, 1292, 1680, 2040, 2080
BssAI RCCGGY 1 cut(s) 1108
BssMI GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
BssNAI GTATAC 1 cut(s) 135
BssNI GRCGYC 1 cut(s) 1472
BssT1I CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
Bst1107I GTATAC 1 cut(s) 135
Bst2UI CCWGG 4 cut(s) 756, 1070, 1788, 2063
Bst4CI ACNGT 5 cut(s) 426, 601, 1525, 1733, 2011
BstACI GRCGYC 1 cut(s) 1472
BstAFI CTTAAG 1 cut(s) 1982
BstAPI GCANNNNNTGC 2 cut(s) 773, 1283
BstBAI YACGTR 1 cut(s) 35
BstBI TTCGAA 1 cut(s) 2140
BstC8I GCNNGC 5 cut(s) 783, 960, 974, 1275, 1365
BstDSI CCRYGG 2 cut(s) 619, 864
BstF5I GGATG 6 cut(s) 646, 1003, 1435, 1516, 1895, 2005
BstH2I RGCGCY 1 cut(s) 1475
BstHHI GCGC 2 cut(s) 417, 1474
BstKTI GATC 5 cut(s) 1087, 1447, 1740, 1970, 2043
BstMAI GTCTC 1 cut(s) 1793
BstMBI GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
BstNI CCWGG 4 cut(s) 756, 1070, 1788, 2063
BstNSI RCATGY 3 cut(s) 698, 1592, 1650
BstSCI CCNGG 5 cut(s) 754, 1068, 1786, 1893, 2061
BstV1I GCAGC 9 cut(s) 537, 652, 776, 781, 814, 893, 916, 963, 1684
BstV2I GAAGAC 1 cut(s) 1037
BstX2I RGATCY 2 cut(s) 1084, 1444
BstXI CCANNNNNNTGG 2 cut(s) 248, 1693
BstYI RGATCY 2 cut(s) 1084, 1444
BstZ17I GTATAC 1 cut(s) 135
Bsu36I CCTNAGG 2 cut(s) 1566, 1931
BsuRI GGCC 5 cut(s) 356, 609, 869, 1308, 1784
BtgI CCRYGG 2 cut(s) 619, 864
BtgZI GCGATG 1 cut(s) 791
BtrI CACGTC 1 cut(s) 1621
BtsCI GGATG 6 cut(s) 646, 1003, 1435, 1516, 1895, 2005
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 3 cut(s) 87, 417, 2087
BveI ACCTGC 1 cut(s) 1291
Cac8I GCNNGC 5 cut(s) 783, 960, 974, 1275, 1365
CciI TCATGA 1 cut(s) 1416
CfoI GCGC 2 cut(s) 417, 1474
Cfr10I RCCGGY 1 cut(s) 1108
Cfr13I GGNCC 7 cut(s) 607, 868, 1106, 1154, 1783, 1868, 2077
CseI GACGC 1 cut(s) 951
Csp6I GTAC 4 cut(s) 567, 890, 1521, 1586
CviQI GTAC 4 cut(s) 567, 890, 1521, 1586
DinI GGCGCC 1 cut(s) 1473
DpnI GATC 5 cut(s) 1086, 1446, 1739, 1969, 2042
DpnII GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
DraI TTTAAA 4 cut(s) 45, 154, 255, 1557
DraIII CACNNNGTG 1 cut(s) 1735
Ecl136II GAGCTC 1 cut(s) 1843
Eco130I CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
Eco147I AGGCCT 1 cut(s) 1308
Eco24I GRGCYC 3 cut(s) 147, 1220, 1845
Eco31I GGTCTC 1 cut(s) 1793
Eco32I GATATC 1 cut(s) 1339
Eco47I GGWCC 4 cut(s) 1106, 1154, 1868, 2077
Eco53kI GAGCTC 1 cut(s) 1843
Eco57I CTGAAG 1 cut(s) 1331
Eco81I CCTNAGG 2 cut(s) 1566, 1931
Eco88I CYCGRG 1 cut(s) 1704
EcoICRI GAGCTC 1 cut(s) 1843
EcoO109I RGGNCCY 2 cut(s) 1783, 1868
EcoRII CCWGG 4 cut(s) 754, 1068, 1786, 2061
EcoRV GATATC 1 cut(s) 1339
EcoT14I CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
EcoT22I ATGCAT 1 cut(s) 1546
EcoT38I GRGCYC 3 cut(s) 147, 1220, 1845
EgeI GGCGCC 1 cut(s) 1473
EheI GGCGCC 1 cut(s) 1473
ErhI CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
FalI AAGNNNNNCTT 2 cut(s) 1122, 1154
FaqI GGGAC 5 cut(s) 302, 1262, 1329, 1804, 1881
FauI CCCGC 3 cut(s) 1266, 1473, 1980
FauNDI CATATG 1 cut(s) 322
FblI GTMKAC 2 cut(s) 134, 1265
Fnu4HI GCNGC 9 cut(s) 551, 666, 765, 795, 828, 882, 930, 977, 1698
FokI GGATG 6 cut(s) 653, 1010, 1442, 1523, 1902, 2012
FriOI GRGCYC 3 cut(s) 147, 1220, 1845
Fsp4HI GCNGC 9 cut(s) 551, 666, 765, 795, 828, 882, 930, 977, 1698
FspBI CTAG 3 cut(s) 786, 980, 1368
GlaI GCGC 2 cut(s) 416, 1473
GluI GCNGC 9 cut(s) 551, 666, 765, 795, 828, 882, 930, 977, 1698
GsaI CCCAGC 1 cut(s) 1815
GsuI CTGGAG 6 cut(s) 573, 699, 747, 938, 1052, 1350
HaeII RGCGCY 1 cut(s) 1475
HaeIII GGCC 5 cut(s) 356, 609, 869, 1308, 1784
HapII CCGG 3 cut(s) 1109, 1887, 1894
HgaI GACGC 1 cut(s) 951
HhaI GCGC 2 cut(s) 417, 1474
Hin1I GRCGYC 1 cut(s) 1472
Hin6I GCGC 2 cut(s) 415, 1472
HinP1I GCGC 2 cut(s) 415, 1472
HincII GTYRAC 2 cut(s) 616, 1266
HindII GTYRAC 2 cut(s) 616, 1266
HindIII AAGCTT 3 cut(s) 170, 1092, 1116
HinfI GANTC 5 cut(s) 853, 951, 1352, 1413, 1976
HpaII CCGG 3 cut(s) 1109, 1887, 1894
HphI GGTGA 5 cut(s) 194, 853, 1906, 2050, 2081
Hpy166II GTNNAC 6 cut(s) 135, 616, 1266, 1624, 2005, 2033
Hpy188III TCNNGA 8 cut(s) 726, 746, 857, 1402, 1417, 1448, 1704, 1717
Hpy8I GTNNAC 6 cut(s) 135, 616, 1266, 1624, 2005, 2033
Hpy99I CGWCG 1 cut(s) 967
HpyAV CCTTC 8 cut(s) 380, 557, 1298, 1306, 1428, 1774, 1845, 2011
HpyCH4III ACNGT 5 cut(s) 426, 601, 1525, 1733, 2011
HpyCH4IV ACGT 3 cut(s) 34, 649, 1620
HpySE526I ACGT 3 cut(s) 34, 649, 1620
Hsp92I GRCGYC 1 cut(s) 1472
HspAI GCGC 2 cut(s) 415, 1472
KasI GGCGCC 1 cut(s) 1471
Kzo9I GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
LmnI GCTCC 8 cut(s) 265, 322, 728, 791, 1223, 1360, 1678, 1854
Lsp1109I GCAGC 9 cut(s) 537, 652, 776, 781, 814, 893, 916, 963, 1684
MaeI CTAG 3 cut(s) 786, 980, 1368
MaeII ACGT 3 cut(s) 34, 649, 1620
MaeIII GTNAC 7 cut(s) 162, 595, 799, 1162, 1534, 1912, 2069
MalI GATC 5 cut(s) 1086, 1446, 1739, 1969, 2042
MbiI CCGCTC 1 cut(s) 1273
MboI GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
MboII GAAGA 5 cut(s) 84, 1039, 1042, 1454, 1891
MfeI CAATTG 3 cut(s) 372, 396, 894
MflI RGATCY 2 cut(s) 1084, 1444
MhlI GDGCHC 3 cut(s) 147, 1220, 1845
Mly113I GGCGCC 1 cut(s) 1472
MlyI GAGTC 3 cut(s) 847, 945, 1407
MmeI TCCRAC 1 cut(s) 945
Mph1103I ATGCAT 1 cut(s) 1546
MseI TTAA 9 cut(s) 44, 153, 158, 254, 909, 1190, 1556, 1662, 1983
MslI CAYNNNNRTG 4 cut(s) 558, 699, 1346, 1593
MspA1I CMGCKG 1 cut(s) 929
MspCI CTTAAG 1 cut(s) 1982
MspI CCGG 3 cut(s) 1109, 1887, 1894
MspR9I CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
MunI CAATTG 3 cut(s) 372, 396, 894
Mva1269I GAATGC 1 cut(s) 1377
MvaI CCWGG 4 cut(s) 756, 1070, 1788, 2063
NarI GGCGCC 1 cut(s) 1472
NciI CCSGG 1 cut(s) 1895
NcoI CCATGG 2 cut(s) 619, 864
NdeI CATATG 1 cut(s) 322
NdeII GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
NlaIV GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
NmeAIII GCCGAG 1 cut(s) 1846
NmuCI GTSAC 3 cut(s) 799, 1912, 2069
NsiI ATGCAT 1 cut(s) 1546
NspI RCATGY 3 cut(s) 698, 1592, 1650
NspV TTCGAA 1 cut(s) 2140
PaeR7I CTCGAG 1 cut(s) 1704
PagI TCATGA 1 cut(s) 1416
PaqCI CACCTGC 1 cut(s) 1291
PasI CCCWGGG 1 cut(s) 1787
PceI AGGCCT 1 cut(s) 1308
PciI ACATGT 1 cut(s) 1588
PcsI WCGNNNNNNNCGW 1 cut(s) 1218
PctI GAATGC 1 cut(s) 1377
PfeI GAWTC 2 cut(s) 1352, 1976
PflFI GACNNNGTC 1 cut(s) 2075
PflMI CCANNNNNTGG 1 cut(s) 1328
PkrI GCNGC 9 cut(s) 552, 667, 766, 796, 829, 883, 931, 978, 1699
PleI GAGTC 3 cut(s) 847, 945, 1407
PluTI GGCGCC 1 cut(s) 1475
PpsI GAGTC 3 cut(s) 847, 945, 1407
Ppu21I YACGTR 1 cut(s) 35
PpuMI RGGWCCY 1 cut(s) 1868
PscI ACATGT 1 cut(s) 1588
PshBI ATTAAT 1 cut(s) 909
PsiI TTATAA 1 cut(s) 2099
Psp124BI GAGCTC 1 cut(s) 1845
Psp5II RGGWCCY 1 cut(s) 1868
Psp6I CCWGG 4 cut(s) 754, 1068, 1786, 2061
PspFI CCCAGC 1 cut(s) 1811
PspGI CCWGG 4 cut(s) 754, 1068, 1786, 2061
PspN4I GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
PspPI GGNCC 7 cut(s) 607, 868, 1106, 1154, 1783, 1868, 2077
PspPPI RGGWCCY 1 cut(s) 1868
PsuI RGATCY 2 cut(s) 1084, 1444
PsyI GACNNNGTC 1 cut(s) 2075
PvuII CAGCTG 1 cut(s) 929
RsaI GTAC 4 cut(s) 568, 891, 1522, 1587
RsaNI GTAC 4 cut(s) 567, 890, 1521, 1586
RseI CAYNNNNRTG 4 cut(s) 558, 699, 1346, 1593
SacI GAGCTC 1 cut(s) 1845
SalI GTCGAC 1 cut(s) 1264
SaqAI TTAA 9 cut(s) 44, 153, 158, 254, 909, 1190, 1556, 1662, 1983
SatI GCNGC 9 cut(s) 551, 666, 765, 795, 828, 882, 930, 977, 1698
Sau3AI GATC 5 cut(s) 1084, 1444, 1737, 1967, 2040
Sau96I GGNCC 7 cut(s) 607, 868, 1106, 1154, 1783, 1868, 2077
SchI GAGTC 3 cut(s) 847, 945, 1407
ScrFI CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
SduI GDGCHC 3 cut(s) 147, 1220, 1845
SfoI GGCGCC 1 cut(s) 1473
Sfr274I CTCGAG 1 cut(s) 1704
SfuI TTCGAA 1 cut(s) 2140
SinI GGWCC 4 cut(s) 1106, 1154, 1868, 2077
SlaI CTCGAG 1 cut(s) 1704
SmiI ATTTAAAT 1 cut(s) 154
SmiMI CAYNNNNRTG 4 cut(s) 558, 699, 1346, 1593
SmlI CTYRAG 3 cut(s) 1113, 1704, 1982
SmoI CTYRAG 3 cut(s) 1113, 1704, 1982
SseBI AGGCCT 1 cut(s) 1308
SsiI CCGC 3 cut(s) 1273, 1480, 1987
SspDI GGCGCC 1 cut(s) 1471
SspI AATATT 1 cut(s) 189
SspMI CTAG 3 cut(s) 786, 980, 1368
SstI GAGCTC 1 cut(s) 1845
StuI AGGCCT 1 cut(s) 1308
StyD4I CCNGG 5 cut(s) 754, 1068, 1786, 1893, 2061
StyI CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
SwaI ATTTAAAT 1 cut(s) 154
TaaI ACNGT 5 cut(s) 426, 601, 1525, 1733, 2011
TaiI ACGT 3 cut(s) 37, 652, 1623
TaqI TCGA 5 cut(s) 501, 1265, 1401, 1705, 2140
TfiI GAWTC 2 cut(s) 1352, 1976
Tru1I TTAA 9 cut(s) 44, 153, 158, 254, 909, 1190, 1556, 1662, 1983
Tru9I TTAA 9 cut(s) 44, 153, 158, 254, 909, 1190, 1556, 1662, 1983
TscAI CASTG 3 cut(s) 87, 424, 2087
TseFI GTSAC 3 cut(s) 799, 1912, 2069
TseI GCWGC 9 cut(s) 550, 665, 764, 794, 827, 881, 929, 976, 1697
Tsp45I GTSAC 3 cut(s) 799, 1912, 2069
TspDTI ATGAA 6 cut(s) 417, 576, 1040, 1433, 2104, 2109
TspGWI ACGGA 1 cut(s) 181
TspRI CASTG 3 cut(s) 87, 424, 2087
Tth111I GACNNNGTC 1 cut(s) 2075
Van91I CCANNNNNTGG 1 cut(s) 1328
Vha464I CTTAAG 1 cut(s) 1982
VpaK11BI GGWCC 4 cut(s) 1106, 1154, 1868, 2077
VspI ATTAAT 1 cut(s) 909
XapI RAATTY 2 cut(s) 573, 2111
XceI RCATGY 3 cut(s) 698, 1592, 1650
XcmI CCANNNNNNNNNTGG 1 cut(s) 617
XhoI CTCGAG 1 cut(s) 1704
XmiI GTMKAC 2 cut(s) 134, 1265
XspI CTAG 3 cut(s) 786, 980, 1368
Zsp2I ATGCAT 1 cut(s) 1546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.