RchiOBHm_Chr7g0224051
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
45911766 .. 45912002
237 bp
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UTR
Exon/CDS
Intron
PRQ20061

Sequence Viewer

Length: 237 bp
ATGTCCTCTTCTTCTCTTCCACAGGTGAAAAAGAATTCAGGTTCAGGTGACATTGGTGGTACAAAGGAGCCTCTTCTTCATGGGGTGCACAAAAATTCACAAAAATATTCTTTTCTTCTCGCAATACTCCCATTTTTATTCCCAGCTCTTGAAGGACTAGTATATGGCTATGATATTGGTGCCACAGCTTGTGCTACAATTTCCCTAGAGTCAGCCACATTAAGCAGAGTATCATAG

Protein Analysis

78

Amino Acids

8.17

Weight (kDa)

7.9

Isoelectric Point (pI)

55.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019021)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 179
AcsI RAATTY 2 cut(s) 34, 94
AfaI GTAC 1 cut(s) 61
AgsI TTSAA 1 cut(s) 152
AhlI ACTAGT 1 cut(s) 157
AluBI AGCT 2 cut(s) 146, 188
AluI AGCT 2 cut(s) 146, 188
Alw21I GWGCWC 1 cut(s) 90
Alw44I GTGCAC 1 cut(s) 86
ApaLI GTGCAC 1 cut(s) 86
ApoI RAATTY 2 cut(s) 34, 94
AsuHPI GGTGA 2 cut(s) 37, 59
BaeGI GKGCMC 1 cut(s) 90
BanI GGYRCC 1 cut(s) 179
Bbv12I GWGCWC 1 cut(s) 90
BcuI ACTAGT 1 cut(s) 157
BfaI CTAG 2 cut(s) 158, 206
BmiI GGNNCC 2 cut(s) 69, 181
BseSI GKGCMC 1 cut(s) 90
BseYI CCCAGC 1 cut(s) 142
BshNI GGYRCC 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 90
Bsp1286I GDGCHC 1 cut(s) 90
BspLI GGNNCC 2 cut(s) 69, 181
BspT107I GGYRCC 1 cut(s) 179
Bst6I CTCTTC 3 cut(s) 13, 21, 78
BstSLI GKGCMC 1 cut(s) 90
Csp6I GTAC 1 cut(s) 60
CviAII CATG 1 cut(s) 80
CviJI RGCY 5 cut(s) 70, 146, 168, 188, 215
CviKI_1 RGCY 5 cut(s) 70, 146, 168, 188, 215
CviQI GTAC 1 cut(s) 60
Eam1104I CTCTTC 3 cut(s) 13, 21, 78
EarI CTCTTC 3 cut(s) 13, 21, 78
EcoRI GAATTC 1 cut(s) 34
FaeI CATG 1 cut(s) 83
FaiI YATR 5 cut(s) 81, 163, 165, 171, 235
FatI CATG 1 cut(s) 79
FspBI CTAG 2 cut(s) 158, 206
GsaI CCCAGC 1 cut(s) 146
Hin1II CATG 1 cut(s) 83
HinfI GANTC 1 cut(s) 209
HphI GGTGA 2 cut(s) 37, 59
Hpy166II GTNNAC 1 cut(s) 88
Hpy188III TCNNGA 1 cut(s) 149
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 1 cut(s) 146
HpyCH4V TGCA 1 cut(s) 88
Hsp92II CATG 1 cut(s) 83
LmnI GCTCC 1 cut(s) 67
LpnPI CCDG 4 cut(s) 8, 24, 30, 156
MaeI CTAG 2 cut(s) 158, 206
MaeIII GTNAC 1 cut(s) 47
MboII GAAGA 5 cut(s) 3, 8, 65, 68, 107
MhlI GDGCHC 1 cut(s) 90
MluCI AATT 3 cut(s) 34, 94, 198
MlyI GAGTC 1 cut(s) 218
MnlI CCTC 2 cut(s) 16, 81
MseI TTAA 1 cut(s) 221
NlaIII CATG 1 cut(s) 83
NlaIV GGNNCC 2 cut(s) 69, 181
NmuCI GTSAC 1 cut(s) 47
PleI GAGTC 1 cut(s) 217
PpsI GAGTC 1 cut(s) 217
PspFI CCCAGC 1 cut(s) 142
PspN4I GGNNCC 2 cut(s) 69, 181
RsaI GTAC 1 cut(s) 61
RsaNI GTAC 1 cut(s) 60
SaqAI TTAA 1 cut(s) 221
SchI GAGTC 1 cut(s) 218
SduI GDGCHC 1 cut(s) 90
SetI ASST 5 cut(s) 27, 43, 49, 148, 190
SpeI ACTAGT 1 cut(s) 157
Sse9I AATT 3 cut(s) 34, 94, 198
SspI AATATT 1 cut(s) 107
SspMI CTAG 2 cut(s) 158, 206
TasI AATT 3 cut(s) 34, 94, 198
Tru1I TTAA 1 cut(s) 221
Tru9I TTAA 1 cut(s) 221
TseFI GTSAC 1 cut(s) 47
Tsp45I GTSAC 1 cut(s) 47
TspDTI ATGAA 1 cut(s) 68
VneI GTGCAC 1 cut(s) 86
XapI RAATTY 2 cut(s) 34, 94
XspI CTAG 2 cut(s) 158, 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.