Rh7BG356500
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
37438521 .. 37440328
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG356500.1

Sequence Viewer

Length: 384 bp
ATGATGACTACTACTTTTTTACTACGTACTCAACAGTCTTTCCAGGATGGCTTTGCTCATCTAAAACTTTTGGAAGATCCGACTCTGATCTTCTCCATCAGACACAGTAAAATTGCTCCATCTGAGAACAAAATAATCAACATATATATGTCCTCTTCTTCTCTCCCACAGGTGAAAAAGCTTTCAGGTTCAGGTGACATTGGTGGTGCAAAGGAGCCTCTTCTTCATGGGGTGCATAAAAATTCACAAAACTATTCTTTTCTTCTCGCAATACTCCCATTTTTATTCCCAGCTCTTGAAGGACTAGTATATGGCTACGATATTGGTGCCACAGCATGTGCTACAATTTCCCTAGAGTCAGCCACATTAAGCGGAGTATCATAG

Protein Analysis

127

Amino Acids

13.72

Weight (kDa)

6.9

Isoelectric Point (pI)

56.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0019021)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 326
AciI CCGC 1 cut(s) 372
AclWI GGATC 1 cut(s) 71
AcsI RAATTY 1 cut(s) 241
AfaI GTAC 1 cut(s) 28
AgsI TTSAA 1 cut(s) 299
AhlI ACTAGT 1 cut(s) 304
AjnI CCWGG 1 cut(s) 42
AluBI AGCT 2 cut(s) 181, 293
AluI AGCT 2 cut(s) 181, 293
AlwI GGATC 1 cut(s) 71
ApoI RAATTY 1 cut(s) 241
AsuHPI GGTGA 2 cut(s) 184, 206
BanI GGYRCC 1 cut(s) 326
BccI CCATC 3 cut(s) 41, 104, 127
BcgI CGANNNNNNTGC 2 cut(s) 308, 342
BciT130I CCWGG 1 cut(s) 44
BcuI ACTAGT 1 cut(s) 304
BfaI CTAG 2 cut(s) 305, 353
Bme1390I CCNGG 1 cut(s) 44
BmiI GGNNCC 2 cut(s) 216, 328
BmrFI CCNGG 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 26
BseBI CCWGG 1 cut(s) 44
BseGI GGATG 1 cut(s) 52
BseMII CTCAG 1 cut(s) 114
BseYI CCCAGC 1 cut(s) 289
BshNI GGYRCC 1 cut(s) 326
Bsp143I GATC 2 cut(s) 76, 87
BspACI CCGC 1 cut(s) 372
BspCNI CTCAG 1 cut(s) 115
BspLI GGNNCC 2 cut(s) 216, 328
BspPI GGATC 1 cut(s) 71
BspT107I GGYRCC 1 cut(s) 326
BssMI GATC 2 cut(s) 76, 87
Bst2UI CCWGG 1 cut(s) 44
Bst4CI ACNGT 2 cut(s) 36, 107
Bst6I CTCTTC 2 cut(s) 160, 225
BstBAI YACGTR 1 cut(s) 26
BstDEI CTNAG 1 cut(s) 123
BstF5I GGATG 1 cut(s) 52
BstKTI GATC 2 cut(s) 79, 90
BstMBI GATC 2 cut(s) 76, 87
BstNI CCWGG 1 cut(s) 44
BstNSI RCATGY 1 cut(s) 339
BstSCI CCNGG 1 cut(s) 42
BstSNI TACGTA 1 cut(s) 26
BstX2I RGATCY 1 cut(s) 76
BstYI RGATCY 1 cut(s) 76
BtsCI GGATG 1 cut(s) 52
Csp6I GTAC 1 cut(s) 27
CviAII CATG 2 cut(s) 227, 336
CviJI RGCY 6 cut(s) 51, 181, 217, 293, 315, 362
CviKI_1 RGCY 6 cut(s) 51, 181, 217, 293, 315, 362
CviQI GTAC 1 cut(s) 27
DdeI CTNAG 1 cut(s) 123
DpnI GATC 2 cut(s) 78, 89
DpnII GATC 2 cut(s) 76, 87
Eam1104I CTCTTC 2 cut(s) 160, 225
EarI CTCTTC 2 cut(s) 160, 225
Eco105I TACGTA 1 cut(s) 26
EcoRII CCWGG 1 cut(s) 42
FaeI CATG 2 cut(s) 230, 339
FatI CATG 2 cut(s) 226, 335
FokI GGATG 1 cut(s) 59
FspBI CTAG 2 cut(s) 305, 353
GsaI CCCAGC 1 cut(s) 293
Hin1II CATG 2 cut(s) 230, 339
HindIII AAGCTT 1 cut(s) 179
HinfI GANTC 2 cut(s) 82, 356
HphI GGTGA 2 cut(s) 184, 206
Hpy188I TCNGA 4 cut(s) 81, 87, 101, 124
Hpy188III TCNNGA 1 cut(s) 296
HpyAV CCTTC 1 cut(s) 293
HpyCH4III ACNGT 2 cut(s) 36, 107
HpyCH4IV ACGT 1 cut(s) 25
HpyCH4V TGCA 2 cut(s) 209, 235
HpyF3I CTNAG 1 cut(s) 123
HpySE526I ACGT 1 cut(s) 25
Hsp92II CATG 2 cut(s) 230, 339
Kzo9I GATC 2 cut(s) 76, 87
LmnI GCTCC 2 cut(s) 121, 214
LpnPI CCDG 6 cut(s) 29, 56, 155, 171, 177, 303
MaeI CTAG 2 cut(s) 305, 353
MaeII ACGT 1 cut(s) 25
MaeIII GTNAC 1 cut(s) 194
MalI GATC 2 cut(s) 78, 89
MboI GATC 2 cut(s) 76, 87
MboII GAAGA 7 cut(s) 82, 86, 147, 150, 212, 215, 254
MflI RGATCY 1 cut(s) 76
MluCI AATT 3 cut(s) 111, 241, 345
MlyI GAGTC 2 cut(s) 76, 365
MmeI TCCRAC 1 cut(s) 104
MnlI CCTC 2 cut(s) 163, 228
MseI TTAA 1 cut(s) 368
MslI CAYNNNNRTG 1 cut(s) 146
MspR9I CCNGG 1 cut(s) 44
MvaI CCWGG 1 cut(s) 44
NdeII GATC 2 cut(s) 76, 87
NlaIII CATG 2 cut(s) 230, 339
NlaIV GGNNCC 2 cut(s) 216, 328
NmuCI GTSAC 1 cut(s) 194
NspI RCATGY 1 cut(s) 339
PfoI TCCNGGA 1 cut(s) 42
PleI GAGTC 2 cut(s) 76, 364
PpsI GAGTC 2 cut(s) 76, 364
Ppu21I YACGTR 1 cut(s) 26
Psp6I CCWGG 1 cut(s) 42
PspFI CCCAGC 1 cut(s) 289
PspGI CCWGG 1 cut(s) 42
PspN4I GGNNCC 2 cut(s) 216, 328
PsuI RGATCY 1 cut(s) 76
RsaI GTAC 1 cut(s) 28
RsaNI GTAC 1 cut(s) 27
RseI CAYNNNNRTG 1 cut(s) 146
SaqAI TTAA 1 cut(s) 368
Sau3AI GATC 2 cut(s) 76, 87
SchI GAGTC 2 cut(s) 76, 365
ScrFI CCNGG 1 cut(s) 44
SetI ASST 6 cut(s) 28, 174, 183, 190, 196, 295
SmiMI CAYNNNNRTG 1 cut(s) 146
SnaBI TACGTA 1 cut(s) 26
SpeI ACTAGT 1 cut(s) 304
Sse9I AATT 3 cut(s) 111, 241, 345
SsiI CCGC 1 cut(s) 372
SspMI CTAG 2 cut(s) 305, 353
StyD4I CCNGG 1 cut(s) 42
TaaI ACNGT 2 cut(s) 36, 107
TaiI ACGT 1 cut(s) 28
TasI AATT 3 cut(s) 111, 241, 345
Tru1I TTAA 1 cut(s) 368
Tru9I TTAA 1 cut(s) 368
TseFI GTSAC 1 cut(s) 194
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 1 cut(s) 215
XapI RAATTY 1 cut(s) 241
XceI RCATGY 1 cut(s) 339
XspI CTAG 2 cut(s) 305, 353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.