RchiOBHm_Chr7g0228111

phosphoinositide phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0006129
Physical Location & Seq
Reverse (-)
51425999 .. 51436691
10693 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20431

Sequence Viewer

Length: 2742 bp
ATGGCGAAACAAGCCGAGAATTCGAAGCCCCCGTACGTCCGGTCCTCCTCCGCCAAAGTCCACCCCTCCGTCGACCTCGACGCCGACCCCAGCACCTACTCCCTCGAAAAATTCCGCCTCTACGAAACCAGACAGCGGTTTTATTTGATCGGGAGCGATCGGAACAAGAGATTCTACAGAGTGCTGAAGATAGACCGGTCGGAGCCGGATGATTTGAATATAAGCGAAGATCCGGTGGTTTACTCGCCGCAAGAGATCAAGAATCTGCTTCAGCGAATCGCCGAGGGAAATCGAGCCACCGGAGGCCTTACTTTCGTCGCCAAGGTGTTTGGGATCGCTGGATGCATTAAGTTTATGGAATCGTATTACTTGATTTTGGTTACGAAGCGTCGGCAGATTGGAAGTATATGCGGTCATGCAATTTATAGTATAGATGAGAGCCAGCTGATAACTATTCCGCATGTCACGATTCAAACAGATATTGCACATTCTAAGACGGAGCTGCGGTACAAGAAGCTTTTGTCGAGTGTTGATTTGACCAAAGATTTTTTCTATAGCTATACATATCCTATAATGCAAAGTCTGCAAAAGAATGTGGTATCAATGGGTGAAGAAGGGATGCAGTATGAAAATATATTTGTATGGAATGCCTATCTAACACAAGCGATTCGCTCAAGGTGTAATAATACAATCTGGACAATAGCCTTAGTACATGGGCATTTTAAGCAGACTAGGTTATCAATCTTTGGGAGGGACTTCAGTGTTTCTCTGGTGTCTAGGCGCTCTCGGCATTTTGCAGGGACACGTTACTTGAAAAGGGGGGTGAATGATAGGGGAAGGGTTGCAAATGATGTCGAGACAGAGCAGATCATCCTTGATGAAGAAGCTGGTTCATGCAAGGGAAAAATGAGTTCTGTTGTCCAGATGCGTGGCTCAATTCCCCTCTTTTGGTCACAAGAAGCTTCAAGATTTAGTCCTAAACCTGATATAATCTTACAGAGATATGATCCTACATATCAGGCTACCAAATTACATTTTGAAGACCTGGCAAGGAGATATGGCAACCCAATTATTGTGCTTAATTTAATCAAGACTGTTGAAAAGAGGCCTCGAGAAATGATGCTGAGGCGTGAGTTCACACACGCGGTTGGGTATTTGAACCAAATTCTTTCTGAAGAAAACCATCTTAAATTCATCCACTGGGACTTTCACAAGTTTGCAAAAAGCAAGTCTGCCAACGTTTTAGCAGTTCTGGGTGCTGTAGCAAGTGAAGCACTCGATTTGACCGGATTTTACTACAGTGGAAAACCTAGCGTTGTTAAACGGAGGCTCAATCAAATAAGTCGAACAAGTACCGGAAGGGAAGCATCTCTTAGAGATCTGAGAGCCAGTTCTGGGGACCTCCCAAGGTTTGGGAGCAGTAATGAAACTCTAAATTCTGCTGTTACTCGAGATAGAGACACTGATCCTGGTCAACCGAAGAAAAATGCTAATTCTGGTGGTGAACCACCACACTTTCAAAGTGGGGTTTTGCGCACAAACTGCATCGATTGCTTGGATCGTACAAATGTTGCCCAGTATGCTTATGGCCTTGCAGCTTTAGGTCGCCAACTTCATGCAATGGGGTTGACGAACATACCAAAAGTTGATCCTGATAGCACTATTGCTGCAGCTCTCATGGATATGTATCAAAGCATGGGAGATGCTCTTGCCCAGCAATATGGTGGTTCTGCAGCTCACAACACTGTATTTCCTGAGAGACAGGGAAAGTGGAAAGCCACAACCCAATCAAGAGAGTTTCTAAAGTCTATCAAGCGATACTACAGCAATGCTTACACTGATGGTGAAAAGCAAGATGCAATAAATTTATTTTTGGGTTACTTTAAACCACAGGAAGGGAAACCTGCTCTCTGGGAGCTGGATTCTGATTATTATCTTCATGTATCTGGGCTTGATGACCTTCTTCCTGATTTGTGTTCACTGGCCAATGAAATGCACTCAGGAGCATTGGGAAACACTCTTGCCCCTATTCCAGCTTGCAAAGAAGACTTTTTGAGGATGAAGCTGACATCCTTTGACAAATTGATTGAAAGAACGTGCAGTTCAATAAAGAATGTAAGACTTTGCAGCGAACCAGACCAGAGACCTGGTGGTGCTACTGCAAATTCTAGTGTGGCACCTGATGCAGCTGAAATACAGTTGAAAAGCCCAAATTGGCTTTTTGGCCAGAGAAAGTATGAAGAAAGTGGATCTGCACCAAAAGTTACTTCACATGAAATCATAAATGGAGGATCCCATAATGACACAGGAGTTGATGGCTATTGTGACCTAAATTGGCTTTCTTCTGGTGGCAATGATAATGAAGAGGATATCTTCCTGAGGTACCTTTCAATGACATCAGTTGATGAAGCCAACGGGTGGTATGGTGGTACTCTGCTAGGTGATCAAGATGAAAGCAGTGAGATATATAAGCACTATGCTGAGTTATGTCAGGGCCCTGCCATTGAGCCATTCCAAAATGATCGGGAGAGAGAGAAGCACTATGCCGATGCTCTTCACATGGGCACAATAAATATTCTAGATGATGCTGCTGTTAAGGCAGAGATGGAAGCAGCTCTCAAGGAGTACGATCAAATTGGAAGTGATCTTGTGAGCATCCCTCCAGCTTGTAAATCATTTGCTGAAGATCCGAGTTGGTTGACGAGATGGATTATTGGGGAAGAGAGGGTGCAAAGGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000139 GO:0000902 GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0005794 GO:0005811 GO:0006629 GO:0006644 GO:0006650 GO:0006661 GO:0006793 GO:0006796 GO:0006996 GO:0007010 GO:0007033 GO:0007272 GO:0007275 GO:0007399 GO:0007610 GO:0007626 GO:0008150 GO:0008152 GO:0008366 GO:0008610 GO:0008654 GO:0009058 GO:0009653 GO:0009826 GO:0009832 GO:0009987 GO:0010008 GO:0010720 GO:0010927 GO:0010975 GO:0010976 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0022008 GO:0022607 GO:0030154 GO:0030182 GO:0031090 GO:0031344 GO:0031346 GO:0031410 GO:0031641 GO:0031642 GO:0031644 GO:0031645 GO:0031901 GO:0031902 GO:0031982 GO:0031984 GO:0032288 GO:0032501 GO:0032502 GO:0032989 GO:0034593 GO:0034595 GO:0034596 GO:0036092 GO:0040007 GO:0042546 GO:0042552 GO:0042578 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043473 GO:0043812 GO:0043813 GO:0044057 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046474 GO:0046486 GO:0046488 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048589 GO:0048646 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051241 GO:0051960 GO:0051961 GO:0051962 GO:0052744 GO:0052866 GO:0060284 GO:0060560 GO:0065007 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0090407 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0106018 GO:0120035 GO:1901576 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Syja_N

Protein Analysis

913

Amino Acids

102.72

Weight (kDa)

6.65

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Syja_N PF02383 110 - 406 5.4e-82 SacI homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1535
Acc36I ACCTGC 1 cut(s) 1912
Acc65I GGTACC 1 cut(s) 2382
AccB1I GGYRCC 2 cut(s) 2176, 2382
AccB7I CCANNNNNTGG 2 cut(s) 1412, 2418
AccI GTMKAC 1 cut(s) 72
AccII CGCG 1 cut(s) 1145
AciI CCGC 8 cut(s) 51, 115, 136, 248, 411, 458, 505, 1145
AclI AACGTT 1 cut(s) 1239
AcoI YGGCCR 2 cut(s) 1983, 2224
AcsI RAATTY 7 cut(s) 19, 110, 1164, 1190, 1435, 1864, 2164
AcuI CTGAAG 5 cut(s) 206, 254, 742, 1194, 2703
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 8 cut(s) 35, 509, 711, 1354, 1564, 2384, 2431, 2627
AfiI CCNNNNNNNGG 6 cut(s) 135, 948, 1395, 1412, 1895, 2418
AflIII ACRYGT 1 cut(s) 803
AgeI ACCGGT 1 cut(s) 195
AjnI CCWGG 3 cut(s) 1044, 1468, 2146
AjuI GAANNNNNNNTTGG 4 cut(s) 533, 565, 2251, 2283
Alw26I GTCTC 4 cut(s) 851, 1452, 1753, 2137
Ama87I CYCGRG 2 cut(s) 1110, 1449
AoxI GGCC 6 cut(s) 304, 1106, 1588, 1983, 2224, 2494
ApaI GGGCCC 1 cut(s) 2498
ApeKI GCWGC 9 cut(s) 502, 1595, 1667, 1670, 1733, 2127, 2186, 2588, 2612
ApoI RAATTY 7 cut(s) 19, 110, 1164, 1190, 1435, 1864, 2164
ArsI GACNNNNNNTTYG 2 cut(s) 1214, 1246
AsiGI ACCGGT 1 cut(s) 195
Asp718I GGTACC 1 cut(s) 2382
AspLEI GCGC 2 cut(s) 783, 1536
AspS9I GGNCC 4 cut(s) 42, 1399, 2494, 2495
AsuHPI GGTGA 5 cut(s) 620, 835, 1514, 1856, 2453
AsuII TTCGAA 1 cut(s) 23
AvaI CYCGRG 2 cut(s) 1110, 1449
AvaII GGWCC 2 cut(s) 42, 1399
AxyI CCTNAGG 1 cut(s) 2378
BaeGI GKGCMC 2 cut(s) 2498, 2567
BalI TGGCCA 2 cut(s) 1985, 2226
BamHI GGATCC 1 cut(s) 2291
BanI GGYRCC 2 cut(s) 2176, 2382
BanII GRGCYC 1 cut(s) 2498
BarI GAAGNNNNNNTAC 2 cut(s) 17, 49
BbsI GAAGAC 2 cut(s) 1047, 2052
BbvCI CCTCAGC 1 cut(s) 1124
BbvI GCAGC 9 cut(s) 489, 1607, 1654, 1682, 1745, 2139, 2198, 2575, 2624
BccI CCATC 5 cut(s) 1191, 1835, 2309, 2599, 2700
BciT130I CCWGG 3 cut(s) 1046, 1470, 2148
BclI TGATCA 1 cut(s) 2443
BcoDI GTCTC 4 cut(s) 851, 1452, 1753, 2137
BfaI CTAG 6 cut(s) 732, 777, 1311, 2169, 2438, 2579
BfmI CTRYAG 7 cut(s) 175, 553, 1260, 1297, 1668, 1731, 1822
BfoI RGCGCY 1 cut(s) 784
BfuAI ACCTGC 1 cut(s) 1912
BglII AGATCT 1 cut(s) 1378
Bme1390I CCNGG 3 cut(s) 1046, 1470, 2148
Bme18I GGWCC 2 cut(s) 42, 1399
BmeT110I CYCGRG 2 cut(s) 1110, 1449
BmgT120I GGNCC 4 cut(s) 42, 1399, 2494, 2495
BmiI GGNNCC 6 cut(s) 204, 1400, 2178, 2293, 2384, 2496
BmrFI CCNGG 3 cut(s) 1046, 1470, 2148
BmrI ACTGGG 2 cut(s) 1210, 1570
BmuI ACTGGG 2 cut(s) 1210, 1570
BpiI GAAGAC 2 cut(s) 1047, 2052
BplI GAGNNNNNCTC 2 cut(s) 2644, 2676
BpmI CTGGAG 1 cut(s) 2646
Bpu10I CCTNAGC 1 cut(s) 1124
Bpu14I TTCGAA 1 cut(s) 23
BpuEI CTTGAG 2 cut(s) 658, 2603
Bsa29I ATCGAT 1 cut(s) 1548
BsaBI GATNNNNATC 2 cut(s) 1686, 1932
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 2137
BsaJI CCNNGG 3 cut(s) 282, 321, 1406
BsaWI WCCGGW 6 cut(s) 39, 195, 232, 299, 1286, 1355
BsaXI ACNNNNNCTCC 2 cut(s) 491, 521
Bsc4I CCNNNNNNNGG 6 cut(s) 135, 948, 1395, 1412, 1895, 2418
Bse118I RCCGGY 1 cut(s) 195
Bse1I ACTGG 4 cut(s) 1205, 1389, 1576, 1986
Bse21I CCTNAGG 1 cut(s) 2378
Bse3DI GCAATG 3 cut(s) 1626, 1834, 2359
Bse8I GATNNNNATC 2 cut(s) 1686, 1932
BseBI CCWGG 3 cut(s) 1046, 1470, 2148
BseCI ATCGAT 1 cut(s) 1548
BseDI CCNNGG 3 cut(s) 282, 321, 1406
BseGI GGATG 8 cut(s) 214, 347, 624, 870, 1194, 2064, 2069, 2655
BseJI GATNNNNATC 2 cut(s) 1686, 1932
BseLI CCNNNNNNNGG 6 cut(s) 135, 948, 1395, 1412, 1895, 2418
BseMI GCAATG 3 cut(s) 1626, 1834, 2359
BseMII CTCAG 6 cut(s) 1115, 1373, 1746, 2013, 2369, 2472
BseNI ACTGG 4 cut(s) 1205, 1389, 1576, 1986
BseRI GAGGAG 1 cut(s) 37
BseSI GKGCMC 2 cut(s) 2498, 2567
BseXI GCAGC 9 cut(s) 489, 1607, 1654, 1682, 1745, 2139, 2198, 2575, 2624
BseYI CCCAGC 2 cut(s) 89, 1713
BsgI GTGCAG 2 cut(s) 2119, 2238
Bsh1236I CGCG 1 cut(s) 1145
Bsh1285I CGRYCG 2 cut(s) 160, 200
BshFI GGCC 6 cut(s) 306, 1108, 1590, 1985, 2226, 2496
BshNI GGYRCC 2 cut(s) 2176, 2382
BshTI ACCGGT 1 cut(s) 195
BshVI ATCGAT 1 cut(s) 1548
BsiEI CGRYCG 2 cut(s) 160, 200
BsiHKCI CYCGRG 2 cut(s) 1110, 1449
BsiSI CCGG 7 cut(s) 40, 196, 206, 233, 300, 1287, 1356
BsiWI CGTACG 1 cut(s) 33
BslFI GGGAC 4 cut(s) 767, 814, 1217, 1412
BslI CCNNNNNNNGG 6 cut(s) 135, 948, 1395, 1412, 1895, 2418
BsmAI GTCTC 4 cut(s) 851, 1452, 1753, 2137
BsmFI GGGAC 4 cut(s) 767, 814, 1217, 1412
BsmI GAATGC 1 cut(s) 652
BsnI GGCC 6 cut(s) 306, 1108, 1590, 1985, 2226, 2496
Bso31I GGTCTC 1 cut(s) 2137
BsoBI CYCGRG 2 cut(s) 1110, 1449
Bsp119I TTCGAA 1 cut(s) 23
Bsp120I GGGCCC 1 cut(s) 2494
Bsp1286I GDGCHC 2 cut(s) 2498, 2567
BspACI CCGC 8 cut(s) 51, 115, 136, 248, 411, 458, 505, 1145
BspANI GGCC 6 cut(s) 306, 1108, 1590, 1985, 2226, 2496
BspCNI CTCAG 6 cut(s) 1116, 1374, 1747, 2012, 2370, 2473
BspDI ATCGAT 1 cut(s) 1548
BspFNI CGCG 1 cut(s) 1145
BspLI GGNNCC 6 cut(s) 204, 1400, 2178, 2293, 2384, 2496
BspMAI CTGCAG 2 cut(s) 1672, 1735
BspMI ACCTGC 1 cut(s) 1912
BspQI GCTCTTC 1 cut(s) 2559
BspT104I TTCGAA 1 cut(s) 23
BspT107I GGYRCC 2 cut(s) 2176, 2382
BspTNI GGTCTC 1 cut(s) 2137
BsrDI GCAATG 3 cut(s) 1626, 1834, 2359
BsrFI RCCGGY 1 cut(s) 195
BsrI ACTGG 4 cut(s) 1205, 1389, 1576, 1986
BssAI RCCGGY 1 cut(s) 195
BssECI CCNNGG 3 cut(s) 282, 321, 1406
BssNI GRCGYC 1 cut(s) 81
BssT1I CCWWGG 2 cut(s) 321, 1406
Bst2UI CCWGG 3 cut(s) 1046, 1470, 2148
Bst4CI ACNGT 4 cut(s) 1096, 1301, 1747, 2199
Bst6I CTCTTC 3 cut(s) 2358, 2559, 2715
BstACI GRCGYC 1 cut(s) 81
BstAPI GCANNNNNTGC 4 cut(s) 583, 1542, 1551, 2183
BstBI TTCGAA 1 cut(s) 23
BstC8I GCNNGC 2 cut(s) 443, 2038
BstDEI CTNAG 9 cut(s) 492, 706, 1124, 1373, 1382, 1755, 1999, 2378, 2481
BstF5I GGATG 8 cut(s) 214, 347, 624, 870, 1194, 2064, 2069, 2655
BstFNI CGCG 1 cut(s) 1145
BstH2I RGCGCY 1 cut(s) 784
BstHHI GCGC 2 cut(s) 783, 1536
BstMAI GTCTC 4 cut(s) 851, 1452, 1753, 2137
BstMCI CGRYCG 2 cut(s) 160, 200
BstNI CCWGG 3 cut(s) 1046, 1470, 2148
BstNSI RCATGY 1 cut(s) 464
BstSCI CCNGG 3 cut(s) 1044, 1468, 2146
BstSFI CTRYAG 7 cut(s) 175, 553, 1260, 1297, 1668, 1731, 1822
BstSLI GKGCMC 2 cut(s) 2498, 2567
BstUI CGCG 1 cut(s) 1145
BstV1I GCAGC 9 cut(s) 489, 1607, 1654, 1682, 1745, 2139, 2198, 2575, 2624
BstV2I GAAGAC 2 cut(s) 1047, 2052
BstX2I RGATCY 5 cut(s) 229, 1378, 2249, 2291, 2686
BstXI CCANNNNNNTGG 3 cut(s) 929, 1721, 2147
BstYI RGATCY 5 cut(s) 229, 1378, 2249, 2291, 2686
Bsu15I ATCGAT 1 cut(s) 1548
Bsu36I CCTNAGG 1 cut(s) 2378
BsuRI GGCC 6 cut(s) 306, 1108, 1590, 1985, 2226, 2496
BsuTUI ATCGAT 1 cut(s) 1548
BtsCI GGATG 8 cut(s) 214, 347, 624, 870, 1194, 2064, 2069, 2655
BtsI GCAGTG 1 cut(s) 2464
BtsIMutI CAGTG 8 cut(s) 766, 1198, 1306, 1461, 1743, 1836, 1979, 2464
BveI ACCTGC 1 cut(s) 1912
Cac8I GCNNGC 2 cut(s) 443, 2038
CfoI GCGC 2 cut(s) 783, 1536
Cfr10I RCCGGY 1 cut(s) 195
Cfr13I GGNCC 4 cut(s) 42, 1399, 2494, 2495
ClaI ATCGAT 1 cut(s) 1548
CseI GACGC 2 cut(s) 89, 377
CsiI ACCWGGT 1 cut(s) 2146
Csp6I GTAC 8 cut(s) 34, 508, 710, 1353, 1563, 2383, 2430, 2626
CspAI ACCGGT 1 cut(s) 195
CviQI GTAC 8 cut(s) 34, 508, 710, 1353, 1563, 2383, 2430, 2626
DdeI CTNAG 9 cut(s) 492, 706, 1124, 1373, 1382, 1755, 1999, 2378, 2481
DraI TTTAAA 1 cut(s) 1885
EaeI YGGCCR 2 cut(s) 1983, 2224
Eam1104I CTCTTC 3 cut(s) 2358, 2559, 2715
EarI CTCTTC 3 cut(s) 2358, 2559, 2715
EciI GGCGGA 2 cut(s) 40, 104
Eco130I CCWWGG 2 cut(s) 321, 1406
Eco147I AGGCCT 2 cut(s) 306, 1108
Eco24I GRGCYC 1 cut(s) 2498
Eco31I GGTCTC 1 cut(s) 2137
Eco32I GATATC 1 cut(s) 2371
Eco47I GGWCC 2 cut(s) 42, 1399
Eco57I CTGAAG 5 cut(s) 206, 254, 742, 1194, 2703
Eco81I CCTNAGG 1 cut(s) 2378
Eco88I CYCGRG 2 cut(s) 1110, 1449
EcoO109I RGGNCCY 3 cut(s) 1399, 2494, 2495
EcoRI GAATTC 1 cut(s) 19
EcoRII CCWGG 3 cut(s) 1044, 1468, 2146
EcoRV GATATC 1 cut(s) 2371
EcoT14I CCWWGG 2 cut(s) 321, 1406
EcoT22I ATGCAT 1 cut(s) 347
EcoT38I GRGCYC 1 cut(s) 2498
ErhI CCWWGG 2 cut(s) 321, 1406
FalI AAGNNNNNCTT 2 cut(s) 1356, 1388
FaqI GGGAC 4 cut(s) 767, 814, 1217, 1412
FbaI TGATCA 1 cut(s) 2443
FblI GTMKAC 1 cut(s) 72
FokI GGATG 8 cut(s) 221, 354, 631, 857, 1181, 2056, 2071, 2642
FriOI GRGCYC 1 cut(s) 2498
FspBI CTAG 6 cut(s) 732, 777, 1311, 2169, 2438, 2579
FspI TGCGCA 1 cut(s) 1535
GlaI GCGC 2 cut(s) 782, 1535
GsaI CCCAGC 2 cut(s) 93, 1717
GsuI CTGGAG 1 cut(s) 2646
HaeII RGCGCY 1 cut(s) 784
HaeIII GGCC 6 cut(s) 306, 1108, 1590, 1985, 2226, 2496
HapII CCGG 7 cut(s) 40, 196, 206, 233, 300, 1287, 1356
HgaI GACGC 2 cut(s) 89, 377
HhaI GCGC 2 cut(s) 783, 1536
Hin1I GRCGYC 1 cut(s) 81
Hin6I GCGC 2 cut(s) 781, 1534
HinP1I GCGC 2 cut(s) 781, 1534
HincII GTYRAC 4 cut(s) 73, 1475, 1629, 2700
HindII GTYRAC 4 cut(s) 73, 1475, 1629, 2700
HindIII AAGCTT 2 cut(s) 515, 960
HinfI GANTC 7 cut(s) 171, 262, 276, 359, 469, 667, 1922
HpaII CCGG 7 cut(s) 40, 196, 206, 233, 300, 1287, 1356
HphI GGTGA 5 cut(s) 620, 835, 1514, 1856, 2453
Hpy166II GTNNAC 9 cut(s) 61, 73, 241, 1137, 1475, 1505, 1629, 1979, 2700
Hpy188I TCNGA 6 cut(s) 162, 202, 1174, 1383, 1927, 2691
Hpy8I GTNNAC 9 cut(s) 61, 73, 241, 1137, 1475, 1505, 1629, 1979, 2700
Hpy99I CGWCG 4 cut(s) 74, 83, 320, 393
HpyAV CCTTC 5 cut(s) 608, 831, 1353, 1889, 1970
HpyCH4III ACNGT 4 cut(s) 1096, 1301, 1747, 2199
HpyCH4IV ACGT 4 cut(s) 36, 805, 1239, 2096
HpyF3I CTNAG 9 cut(s) 492, 706, 1124, 1373, 1382, 1755, 1999, 2378, 2481
HpySE526I ACGT 4 cut(s) 36, 805, 1239, 2096
Hsp92I GRCGYC 1 cut(s) 81
HspAI GCGC 2 cut(s) 781, 1534
KpnI GGTACC 1 cut(s) 2386
Ksp22I TGATCA 1 cut(s) 2443
LguI GCTCTTC 1 cut(s) 2559
LmnI GCTCC 6 cut(s) 153, 202, 499, 1416, 1915, 2003
Lsp1109I GCAGC 9 cut(s) 489, 1607, 1654, 1682, 1745, 2139, 2198, 2575, 2624
MabI ACCWGGT 1 cut(s) 2146
MaeI CTAG 6 cut(s) 732, 777, 1311, 2169, 2438, 2579
MaeII ACGT 4 cut(s) 36, 805, 1239, 2096
MaeIII GTNAC 8 cut(s) 379, 463, 806, 951, 1444, 1877, 2263, 2324
MflI RGATCY 5 cut(s) 229, 1378, 2249, 2291, 2686
MhlI GDGCHC 2 cut(s) 2498, 2567
MlsI TGGCCA 2 cut(s) 1985, 2226
MluNI TGGCCA 2 cut(s) 1985, 2226
MmeI TCCRAC 1 cut(s) 180
Mox20I TGGCCA 2 cut(s) 1985, 2226
Mph1103I ATGCAT 1 cut(s) 347
MscI TGGCCA 2 cut(s) 1985, 2226
MseI TTAA 8 cut(s) 348, 723, 1080, 1085, 1188, 1320, 1884, 2595
MslI CAYNNNNRTG 1 cut(s) 1682
Msp20I TGGCCA 2 cut(s) 1985, 2226
MspA1I CMGCKG 3 cut(s) 136, 445, 2189
MspI CCGG 7 cut(s) 40, 196, 206, 233, 300, 1287, 1356
MspR9I CCNGG 3 cut(s) 1046, 1470, 2148
Mva1269I GAATGC 1 cut(s) 652
MvaI CCWGG 3 cut(s) 1046, 1470, 2148
MvnI CGCG 1 cut(s) 1145
NlaIV GGNNCC 6 cut(s) 204, 1400, 2178, 2293, 2384, 2496
NmeAIII GCCGAG 3 cut(s) 40, 307, 766
NmuCI GTSAC 3 cut(s) 463, 951, 2324
NsbI TGCGCA 1 cut(s) 1535
NsiI ATGCAT 1 cut(s) 347
NspI RCATGY 1 cut(s) 464
NspV TTCGAA 1 cut(s) 23
PaeR7I CTCGAG 2 cut(s) 1110, 1449
PceI AGGCCT 2 cut(s) 306, 1108
PciSI GCTCTTC 1 cut(s) 2559
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PctI GAATGC 1 cut(s) 652
PfeI GAWTC 7 cut(s) 171, 262, 276, 359, 469, 667, 1922
Pfl23II CGTACG 1 cut(s) 33
PflMI CCANNNNNTGG 2 cut(s) 1412, 2418
PinAI ACCGGT 1 cut(s) 195
Ple19I CGATCG 1 cut(s) 160
PpuMI RGGWCCY 1 cut(s) 1399
Psp1406I AACGTT 1 cut(s) 1239
Psp5II RGGWCCY 1 cut(s) 1399
Psp6I CCWGG 3 cut(s) 1044, 1468, 2146
PspFI CCCAGC 2 cut(s) 89, 1713
PspGI CCWGG 3 cut(s) 1044, 1468, 2146
PspLI CGTACG 1 cut(s) 33
PspN4I GGNNCC 6 cut(s) 204, 1400, 2178, 2293, 2384, 2496
PspOMI GGGCCC 1 cut(s) 2494
PspPI GGNCC 4 cut(s) 42, 1399, 2494, 2495
PspPPI RGGWCCY 1 cut(s) 1399
PstI CTGCAG 2 cut(s) 1672, 1735
PsuI RGATCY 5 cut(s) 229, 1378, 2249, 2291, 2686
PvuI CGATCG 1 cut(s) 160
PvuII CAGCTG 2 cut(s) 445, 2189
RsaI GTAC 8 cut(s) 35, 509, 711, 1354, 1564, 2384, 2431, 2627
RsaNI GTAC 8 cut(s) 34, 508, 710, 1353, 1563, 2383, 2430, 2626
RseI CAYNNNNRTG 1 cut(s) 1682
SalI GTCGAC 1 cut(s) 71
SapI GCTCTTC 1 cut(s) 2559
SaqAI TTAA 8 cut(s) 348, 723, 1080, 1085, 1188, 1320, 1884, 2595
Sau96I GGNCC 4 cut(s) 42, 1399, 2494, 2495
ScrFI CCNGG 3 cut(s) 1046, 1470, 2148
SduI GDGCHC 2 cut(s) 2498, 2567
SexAI ACCWGGT 1 cut(s) 2146
SfcI CTRYAG 7 cut(s) 175, 553, 1260, 1297, 1668, 1731, 1822
Sfr274I CTCGAG 2 cut(s) 1110, 1449
SfuI TTCGAA 1 cut(s) 23
SinI GGWCC 2 cut(s) 42, 1399
SlaI CTCGAG 2 cut(s) 1110, 1449
SmiMI CAYNNNNRTG 1 cut(s) 1682
SmlI CTYRAG 4 cut(s) 673, 1110, 1449, 2618
SmoI CTYRAG 4 cut(s) 673, 1110, 1449, 2618
SseBI AGGCCT 2 cut(s) 306, 1108
SsiI CCGC 8 cut(s) 51, 115, 136, 248, 411, 458, 505, 1145
SspI AATATT 1 cut(s) 2575
SspMI CTAG 6 cut(s) 732, 777, 1311, 2169, 2438, 2579
StuI AGGCCT 2 cut(s) 306, 1108
StyD4I CCNGG 3 cut(s) 1044, 1468, 2146
StyI CCWWGG 2 cut(s) 321, 1406
TaaI ACNGT 4 cut(s) 1096, 1301, 1747, 2199
TaiI ACGT 4 cut(s) 39, 808, 1242, 2099
TatI WGTACW 1 cut(s) 709
TauI GCSGC 1 cut(s) 250
TfiI GAWTC 7 cut(s) 171, 262, 276, 359, 469, 667, 1922
Tru1I TTAA 8 cut(s) 348, 723, 1080, 1085, 1188, 1320, 1884, 2595
Tru9I TTAA 8 cut(s) 348, 723, 1080, 1085, 1188, 1320, 1884, 2595
TscAI CASTG 8 cut(s) 766, 1205, 1306, 1468, 1750, 1843, 1986, 2464
TseFI GTSAC 3 cut(s) 463, 951, 2324
TseI GCWGC 9 cut(s) 502, 1595, 1667, 1670, 1733, 2127, 2186, 2588, 2612
Tsp45I GTSAC 3 cut(s) 463, 951, 2324
TspGWI ACGGA 3 cut(s) 58, 512, 1339
TspRI CASTG 8 cut(s) 766, 1205, 1306, 1468, 1750, 1843, 1986, 2464
Van91I CCANNNNNTGG 2 cut(s) 1412, 2418
VpaK11BI GGWCC 2 cut(s) 42, 1399
XapI RAATTY 7 cut(s) 19, 110, 1164, 1190, 1435, 1864, 2164
XbaI TCTAGA 1 cut(s) 2578
XceI RCATGY 1 cut(s) 464
XcmI CCANNNNNNNNNTGG 3 cut(s) 1583, 1721, 2147
XhoI CTCGAG 2 cut(s) 1110, 1449
XmiI GTMKAC 1 cut(s) 72
XspI CTAG 6 cut(s) 732, 777, 1311, 2169, 2438, 2579
Zsp2I ATGCAT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.