Rorug07G0245700

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
22777191 .. 22782649
5459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0245700.1

Sequence Viewer

Length: 2586 bp
ATGGTTTCGAGATCTTATTCCAACTTACTTGATCTTACTTCTGGTGAATCCCTAACTTTTGGCCGTGAGAAGAAGAGGTTCCCGCGAGTTGCTACTGTTGCGGGAGTATTGTCTGAGCTAGATGATGATACCAGTAACAACAGTGTTGGCTCTGATGCTCCTTCGTCCATTTCTCAAGACCGGATGATCATAGTAGGGAATCAGCTTCCACTTCGGGCGCATAGAAGCGATGATGGGGAATGGTGCTTTAGCTGGGATGAGGATTCACTACTCTTGCAACTCAAAGATGGCCTTGGAGAAGATGTAGAAGTTATCTATATTGGTTGTCTAAAAGAAGAAATTGACCCGAGTGAGCAAGAGGATGTAGCCCAAACTTTGCTTGATACTTTTAAATGTGTCCCTGCATTTATCCCTCCAAACCTTTTCAGTAAATTTTATCATGGCTTCTGTAAGCAGCATTTGTGGCCTTTGTTTCACTACATGCTTCCTCTATCACCAGATCTCGGTGGCAGGTTTGATCGATCGCTGTGGCAAGCTTATGTTTCTGTGAACAAGATATTTGCAGATAAAGTGATGGAAGTTATTAGCCCGGATGAAGATTTTGTGTGGGTTCATGACTACCATTTGATGATTTTGCCAACATTCTTGAGGAAGAGGTTTAATAGGTTGAAGCTGGGATTCTTTCTCCATAGTCCATTCCCTTCGTCTGAGATATACAGAACACTTCCAGTAAGGGATGAGCTTCTAAGAGCACTTCTAAATTCTGATCTCATTGGCTTCCATACTTTTGATTATGCTAGGCACTTCCTTTCTTGTTGTAGTAGAATGCTTGGCCTCTCATATCAATCGAAGAGGGGATACATTGGGCTCGAGTATTATGGCCGCACAGTAAGCATTAAGATTCTTCCTGTTGGGATACATATAGGCCAGCTTCAATCTGTGTTGAATCTGCCAGAGACTGAATCTAAGGTTGCTGAGCTGCAAGATCAATTTAGGGGGAAAACTGTTTTGCTTGGGGTTGATGACATGGACATCTTTAAGGGAATTAGCTTGAAACTTTTGGCTATGGAGCAATTGCTTATACAACATCCTGATAAGAGGGGTAAAGTTGTTCTTATTCAAATTGCTAACCCGGCAAGGGGCCGGGGGAAAGATGTCCTGGAGGTCCAGTTAGAAACTGATGCCACAGTGAAGAGGATCAATGAGACATTTGGGAAGCAAGGATATAGTCCAGTGGTCTTGATCGATACCCCACTTCAGTTTTTTGAGCGAATTGCTTATTATGTTATTGCAGAGTGTTGTCTTGTTACAGCAGTGAGGGACGGGATGAATCTTATACCCTATGAGTACATAATATGCCGCCAAGGAAATGAGAAGCTGAATGAGACTTTAGGACTAAACCCAACAACCCCAAAGAAAAGCATGCTTGTGGTTTCTGAGTTTATTGGGTGTTCTCCATCGCTAAGCGGAGCAATTCGAGTTAACCCATGGAACATTGATGCTGTAGTTGAAGCTATGGATTCTGCTCTTATGATCCCAGAAGGAGAAAAACAGTTGCGGCATGAGAAGCATTATAGGTATGTCAGTACACATGATGTTGCATATTGGGCACGTAGTTTCTTGCAGGATCTTGAAAGGGCATGTAAGGATCACATGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGGTTCAGGGTAATTGCTTTGGATCCAAATTTCAGAAAGCTTTCAGTTGAGCATATTGTTTCAGCTTACAAGAGGACGAAATGTCGAGCAATTCTCTTGGATTATGATGGTGCTATGATGCTGCCGGGTTCAATTATTACCACACCTAATTCAGAGGCTATTGGAATCTTGAACAATTTATGCAATGACCCGAGGAATGTTGTATTTCTTGTTAGTGGGAAAGACAGGAAGACTTTAACTGAATGGTTCTCTTCTTGTGGGAAGCTTGGGATTGCAGCAGAGCATGGCTTTTTTGTGAGGACAAATCATAATGCTGATTGGGAAACGTGCTTCTCTGTTCCTGATTTTGATTGGAAACAGATTGCTGAACCAGTAATGCAGTTATACACTGAAACAACTGATGGTTCTAATATAGAGGCTAAAGAAAGTGCTCTTGTTTGGAATTACCAGTATGCAGATCCAGATTTTGGCTTCTGTCAGGCTAAGGAGCTTCTGGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAAAGTGGCCAGCACATTGTAGAAGTTAAACCTCAGGGTGTCAACAAGGGCCTTGTGGCAGAACGCCTCCTCTTAACAATGAAACAGAAGGCAATGCTCCCAGACTTTGTTCTCTGCATTGGGGATGACAGGTCCGATGAAGACATGTTTGAAGTGATAATGAGTGCAAGGGACTCTCTCTCTCCAGTCTCTGAAGTGTTTGCTTGCACTGTTGGTCGGAAGCCCAGCAAGGCCAAGTACTTCTTGGAAGACACAACTGAGATTGTGAGAATGTTACAGGTCCTTGCCAATGCTTCAGAGCAGGCGGCTAGAAGTACCCCACAACCTTCTCAGCGAGTGGTTACTGTAGAAAGCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

861

Amino Acids

97.34

Weight (kDa)

5.71

Isoelectric Point (pI)

45.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_20 PF00982 61 - 545 1.2e-187 Glycosyltransferase family 20
Trehalose_PPase PF02358 595 - 827 1.4e-80 Trehalose-phosphatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G36930 AT5G36930 AT5G36930 AT5G36930
fragaria_vesca FvH4_3g45361 FvH4_3g45380 FvH4_5g21061 FvH4_5g21062 FvH4_5g21063 FvH4_5g32050 FvH4_5g32970 FvH4_5g32990 FvH4_5g34190 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34210 FvH4_5g34211 FvH4_5g34240 FvH4_5g34250
malus_domestica MD00G1011700.v1.1 MD00G1026100.v1.1 MD00G1026500.v1.1 MD00G1027000.v1.1 MD00G1027100.v1.1 MD00G1027700.v1.1 MD00G1027800.v1.1 MD00G1028000.v1.1 MD00G1220000.v1.1 MD02G1024400.v1.1 MD02G1024800.v1.1 MD02G1026000.v1.1 MD02G1026100.v1.1 MD02G1031800.v1.1 MD02G1038500.v1.1 MD02G1038700.v1.1 MD02G1039200.v1.1 MD02G1040600.v1.1 MD02G1040900.v1.1 MD02G1041200.v1.1 MD02G1041300.v1.1 MD02G1041700.v1.1 MD02G1042000.v1.1 MD02G1043800.v1.1 MD02G1043900.v1.1 MD02G1044300.v1.1 MD02G1045200.v1.1 MD02G1045300.v1.1 MD02G1051200.v1.1 MD02G1052200.v1.1 MD02G1052800.v1.1 MD02G1053100.v1.1 MD02G1053600.v1.1 MD02G1055500.v1.1 MD02G1063300.v1.1 MD02G1063400.v1.1 MD02G1063800.v1.1 MD02G1306500.v1.1 MD02G1306600.v1.1 MD02G1306700.v1.1 MD02G1306900.v1.1 MD02G1307200.v1.1 MD04G1011700.v1.1 MD05G1315400.v1.1 MD05G1316000.v1.1 MD05G1316700.v1.1 MD05G1317000.v1.1 MD05G1317300.v1.1 MD05G1317600.v1.1 MD05G1317700.v1.1 MD07G1102800.v1.1 MD07G1238200.v1.1 MD08G1175900.v1.1 MD08G1203600.v1.1 MD09G1024200.v1.1 MD09G1039600.v1.1 MD09G1044800.v1.1 MD09G1045100.v1.1 MD10G1038700.v1.1 MD10G1039000.v1.1 MD10G1039200.v1.1 MD10G1040000.v1.1 MD10G1040200.v1.1 MD10G1040600.v1.1 MD10G1040800.v1.1 MD10G1297300.v1.1 MD12G1247500.v1.1 MD12G1247900.v1.1 MD12G1248300.v1.1 MD12G1248800.v1.1 MD15G1103700.v1.1 MD15G1103800.v1.1 MD15G1104000.v1.1 MD15G1179600.v1.1 MD15G1182500.v1.1 MD16G1068200.v1.1 MD16G1068300.v1.1 MD17G1024600.v1.1 MD17G1024700.v1.1 MD17G1025000.v1.1 MD17G1025900.v1.1
prunus_persica Prupe.1G539800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G550800_v2.0.a1 Prupe.1G557100_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557200_v2.0.a1 Prupe.1G557300_v2.0.a1
pyrus_communis pycom02g02080 pycom02g02090 pycom02g02110 pycom02g03220 pycom02g03260 pycom02g03370 pycom02g03390 pycom02g03410 pycom02g03420 pycom02g03450 pycom02g03500 pycom02g03730 pycom02g03770 pycom02g04400 pycom02g04410 pycom02g04430 pycom02g04450 pycom02g04460 pycom02g04490 pycom02g05200 pycom02g25710 pycom02g25750 pycom02g25790 pycom02g25810 pycom02g25830 pycom04g00920 pycom04g00930 pycom04g00940 pycom05g29300 pycom05g29310 pycom05g29380 pycom05g29410 pycom07g06310 pycom07g21420 pycom08g15070 pycom08g17540 pycom08g17560 pycom08g17570 pycom10g02670 pycom10g02680 pycom10g02700 pycom10g02770 pycom10g02790 pycom10g02800 pycom10g02810 pycom10g25020 pycom10g25030 pycom10g25050 pycom10g25080 pycom111g01990 pycom111g02000 pycom111g02030 pycom111g02040 pycom111g02050 pycom111g02060 pycom12g22710 pycom12g22720 pycom12g22730 pycom12g22740 pycom12g22750 pycom12g22770 pycom12g22780 pycom12g22790 pycom12g22800 pycom12g22810 pycom12g22830 pycom12g22840 pycom12g22860 pycom15g09440 pycom15g09480 pycom15g16120 pycom15g32380 pycom16g05970 pycom17g02100
rosa_chinensis RchiOBHm_Chr2g0144661 RchiOBHm_Chr4g0407491 RchiOBHm_Chr4g0407501 RchiOBHm_Chr4g0412381 RchiOBHm_Chr7g0208191 RchiOBHm_Chr7g0208201 RchiOBHm_Chr7g0208211 RchiOBHm_Chr7g0208221 RchiOBHm_Chr7g0228071 RchiOBHm_Chr7g0228121 RchiOBHm_Chr7g0230971 RchiOBHm_Chr7g0230981 RchiOBHm_Chr7g0233901 RchiOBHm_Chr7g0233951 RchiOBHm_Chr7g0233961 RchiOBHm_Chr7g0233991 RchiOBHm_Chr7g0234021 RchiOBHm_Chr7g0234151 RchiOBHm_Chr7g0234161 RchiOBHm_Chr7g0234241 RchiOBHm_Chr7g0234501 RchiOBHm_Chr7g0234641 RchiOBHm_Chr7g0234771 RchiOBHm_Chr7g0234781 RchiOBHm_Chr7g0234991 RchiOBHm_Chr7g0241291 RchiOBHm_Chr7g0241301
rosa_laevigata RLG00000001186 RLG00000001187 RLG00000001212 RLG00000001226 RLG00000001233 RLG00000001590 RLG00000003242 RLG00000003243 RLG00000003249 RLG00000008688 RLG00000008690
rosa_multiflora Rmu_co7966574.1_g000001 Rmu_co8120830.1_g000001 Rmu_co8142226.1_g000001 Rmu_co8293083.1_g000001 Rmu_co8351227.1_g000001 Rmu_co8380159.1_g000001 Rmu_co8456505.1_g000001 Rmu_sc0000676.1_g000025 Rmu_sc0000706.1_g000018 Rmu_sc0000706.1_g000040 Rmu_sc0000740.1_g000029 Rmu_sc0000740.1_g000032 Rmu_sc0000740.1_g000037 Rmu_sc0000740.1_g000040 Rmu_sc0000762.1_g000003 Rmu_sc0000762.1_g000019 Rmu_sc0000762.1_g000034 Rmu_sc0000762.1_g000069 Rmu_sc0000892.1_g000001 Rmu_sc0000945.1_g000040 Rmu_sc0001913.1_g000037 Rmu_sc0001913.1_g000041 Rmu_sc0001913.1_g000049 Rmu_sc0002775.1_g000017 Rmu_sc0002775.1_g000018 Rmu_sc0002775.1_g000020 Rmu_sc0002775.1_g000021 Rmu_sc0002775.1_g000022 Rmu_sc0002775.1_g000025 Rmu_sc0002775.1_g000026 Rmu_sc0002775.1_g000028 Rmu_sc0002775.1_g000030 Rmu_sc0004858.1_g000002 Rmu_sc0004864.1_g000022 Rmu_sc0005038.1_g000023 Rmu_sc0005840.1_g000014 Rmu_sc0006724.1_g000003 Rmu_sc0006824.1_g000005 Rmu_sc0007869.1_g000003 Rmu_sc0007869.1_g000005 Rmu_sc0007869.1_g000008 Rmu_sc0008646.1_g000007 Rmu_sc0009637.1_g000009 Rmu_sc0010500.1_g000002 Rmu_sc0010500.1_g000012 Rmu_sc0012403.1_g000025 Rmu_sc0013768.1_g000025 Rmu_sc0015625.1_g000001 Rmu_sc0019715.1_g000001 Rmu_sc0021133.1_g000002 Rmu_sc0021904.1_g000001 Rmu_sc0021904.1_g000003 Rmu_sc0021904.1_g000004 Rmu_sc0022054.1_g000001 Rmu_sc0026025.1_g000001 Rmu_sc0036828.1_g000002 Rmu_sc0041808.1_g000001 Rmu_ssc0000012.1_g000001
rosa_roxburghii Rroxscaffold_3G00226370 Rroxscaffold_3G00226860 Rroxscaffold_3G00226900 Rroxscaffold_3G00226930 Rroxscaffold_3G00226940 Rroxscaffold_3G00226970 Rroxscaffold_3G00226980 Rroxscaffold_3G00231530 Rroxscaffold_3G00237090 Rroxscaffold_3G00250760 Rroxscaffold_3G00250800
rosa_rugosa Rorug04G0082300 Rorug07G0101800 Rorug07G0102000 Rorug07G0102100 Rorug07G0221200 Rorug07G0245700 Rorug07G0245700 Rorug07G0245700 Rorug07G0263900 Rorug07G0264000 Rorug07G0264000 Rorug07G0264500 Rorug07G0282900 Rorug07G0282900 Rorug07G0283100 Rorug07G0283200.1 Rorug07G0283300 Rorug07G0283900 Rorug07G0284000 Rorug07G0284100 Rorug07G0284300 Rorug07G0284400 Rorug07G0284500 Rorug07G0285000 Rorug07G0285200 Rorug07G0285300 Rorug07G0285500 Rorug07G0286800 Rorug07G0286900 Rorug07G0287100 Rorug07G0287200
rosa_samantha Rh7AG236100 Rh7AG236200 Rh7AG236300 Rh7AG440000 Rh7AG440100 Rh7BG411900 Rh7BG412000 Rh7BG412600 Rh7CG251300 Rh7CG417700 Rh7CG460100 Rh7DG242100 Rh7DG242200 Rh7DG242300 Rh7DG429300
rosa_wichuraiana Rw0G005070 Rw0G010780 Rw0G012530 Rw7G020110 Rw7G020160 Rw7G020170 Rw7G033210 Rw7G033230 Rw7G033250 Rw7G034540 Rw7G035150 Rw7G036190 Rw7G036210 Rw7G036260 Rw7G036270 Rw7G036290 Rw7G036300 Rw7G036310 Rw7G036350 Rw7G036360 Rw7G036440 Rw7G036510 Rw7G036530 Rw7G036570 Rw7G036590 Rw7G036730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 501
AccB7I CCANNNNNTGG 1 cut(s) 2156
AccII CGCG 1 cut(s) 85
AciI CCGC 7 cut(s) 83, 101, 883, 1360, 1467, 1558, 2531
AclWI GGATC 8 cut(s) 1205, 1528, 1635, 1656, 1706, 1719, 2141, 2193
AcoI YGGCCR 3 cut(s) 61, 880, 2233
AcsI RAATTY 3 cut(s) 431, 760, 1717
AcuI CTGAAG 3 cut(s) 1241, 2439, 2505
AfaI GTAC 4 cut(s) 1349, 1588, 2465, 2542
AfiI CCNNNNNNNGG 4 cut(s) 503, 1138, 1139, 2156
AflIII ACRYGT 1 cut(s) 2370
AhdI GACNNNNNGTC 1 cut(s) 1770
AjnI CCWGG 2 cut(s) 1158, 2190
Alw21I GWGCWC 2 cut(s) 754, 2122
Alw26I GTCTC 4 cut(s) 950, 1199, 1379, 2419
AlwI GGATC 8 cut(s) 1205, 1528, 1635, 1656, 1706, 1719, 2141, 2193
AlwNI CAGNNNCTG 3 cut(s) 959, 2222, 2417
Ama87I CYCGRG 3 cut(s) 346, 869, 1879
ApeKI GCWGC 4 cut(s) 454, 979, 1810, 1964
ApoI RAATTY 3 cut(s) 431, 760, 1717
Asp700I GAANNNNTTC 3 cut(s) 77, 1729, 2199
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 5 cut(s) 1141, 1165, 2275, 2358, 2506
AsuC2I CCSGG 4 cut(s) 590, 1133, 1145, 1815
AsuHPI GGTGA 3 cut(s) 56, 486, 2180
AvaI CYCGRG 3 cut(s) 346, 869, 1879
AvaII GGWCC 3 cut(s) 1165, 2358, 2506
AxyI CCTNAGG 1 cut(s) 2259
BaeGI GKGCMC 1 cut(s) 1612
BalI TGGCCA 1 cut(s) 2235
BamHI GGATCC 1 cut(s) 1711
BanII GRGCYC 1 cut(s) 870
BarI GAAGNNNNNNTAC 2 cut(s) 842, 874
BbsI GAAGAC 3 cut(s) 1925, 2373, 2481
Bbv12I GWGCWC 2 cut(s) 754, 2122
BbvI GCAGC 4 cut(s) 466, 966, 1797, 1976
BccI CCATC 6 cut(s) 227, 281, 568, 1465, 1790, 2084
BceAI ACGGC 1 cut(s) 48
BciT130I CCWGG 2 cut(s) 1160, 2192
BciVI GTATCC 2 cut(s) 851, 909
BclI TGATCA 1 cut(s) 186
BcnI CCSGG 4 cut(s) 590, 1133, 1145, 1815
BcoDI GTCTC 4 cut(s) 950, 1199, 1379, 2419
BfaI CTAG 3 cut(s) 119, 798, 2535
BfmI CTRYAG 2 cut(s) 1503, 2571
BfuAI ACCTGC 1 cut(s) 501
BfuI GTATCC 2 cut(s) 851, 909
BglII AGATCT 2 cut(s) 11, 499
BisI GCNGC 8 cut(s) 455, 883, 980, 1360, 1559, 1811, 1965, 2532
BlpI GCTNAGC 2 cut(s) 975, 1463
BlsI GCNGC 8 cut(s) 456, 884, 981, 1361, 1560, 1812, 1966, 2533
BmcAI AGTACT 1 cut(s) 2465
Bme1390I CCNGG 6 cut(s) 590, 1133, 1145, 1160, 1815, 2192
Bme18I GGWCC 3 cut(s) 1165, 2358, 2506
BmeRI GACNNNNNGTC 1 cut(s) 1770
BmeT110I CYCGRG 3 cut(s) 346, 869, 1879
BmgT120I GGNCC 5 cut(s) 1141, 1165, 2275, 2358, 2506
BmiI GGNNCC 3 cut(s) 80, 1142, 1713
BmrFI CCNGG 6 cut(s) 590, 1133, 1145, 1160, 1815, 2192
BmsI GCATC 5 cut(s) 145, 1171, 1489, 1655, 1797
BpiI GAAGAC 3 cut(s) 1925, 2373, 2481
BplI GAGNNNNNCTC 2 cut(s) 1767, 1799
BpmI CTGGAG 2 cut(s) 1181, 2394
Bpu10I CCTNAGC 1 cut(s) 2172
Bpu1102I GCTNAGC 2 cut(s) 975, 1463
BpuEI CTTGAG 2 cut(s) 159, 667
BpuMI CCSGG 4 cut(s) 590, 1133, 1145, 1815
Bsa29I ATCGAT 2 cut(s) 520, 1245
BsaAI YACGTR 1 cut(s) 1613
BsaJI CCNNGG 5 cut(s) 292, 1144, 1363, 1487, 1880
BsaWI WCCGGW 1 cut(s) 180
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 1154, 1184
Bsc4I CCNNNNNNNGG 4 cut(s) 503, 1138, 1139, 2156
Bse1I ACTGG 8 cut(s) 132, 728, 1168, 1232, 2060, 2137, 2216, 2411
Bse21I CCTNAGG 1 cut(s) 2259
Bse3DI GCAATG 2 cut(s) 1879, 2325
BseBI CCWGG 2 cut(s) 1160, 2192
BseCI ATCGAT 2 cut(s) 520, 1245
BseDI CCNNGG 5 cut(s) 292, 1144, 1363, 1487, 1880
BseGI GGATG 8 cut(s) 189, 262, 367, 598, 742, 1087, 1332, 2356
BseLI CCNNNNNNNGG 4 cut(s) 503, 1138, 1139, 2156
BseMI GCAATG 2 cut(s) 1879, 2325
BseMII CTCAG 7 cut(s) 105, 699, 966, 1428, 2273, 2475, 2570
BseNI ACTGG 8 cut(s) 132, 728, 1168, 1232, 2060, 2137, 2216, 2411
BseRI GAGGAG 3 cut(s) 1672, 1675, 2285
BseSI GKGCMC 1 cut(s) 1612
BseXI GCAGC 4 cut(s) 466, 966, 1797, 1976
BseYI CCCAGC 4 cut(s) 252, 673, 1668, 2450
Bsh1236I CGCG 1 cut(s) 85
Bsh1285I CGRYCG 1 cut(s) 524
BshVI ATCGAT 2 cut(s) 520, 1245
BsiEI CGRYCG 1 cut(s) 524
BsiHKAI GWGCWC 2 cut(s) 754, 2122
BsiHKCI CYCGRG 3 cut(s) 346, 869, 1879
BsiSI CCGG 5 cut(s) 181, 590, 1133, 1144, 1814
BslFI GGGAC 3 cut(s) 383, 1334, 2411
BslI CCNNNNNNNGG 4 cut(s) 503, 1138, 1139, 2156
BsmAI GTCTC 4 cut(s) 950, 1199, 1379, 2419
BsmFI GGGAC 3 cut(s) 383, 1334, 2411
BsmI GAATGC 1 cut(s) 831
BsoBI CYCGRG 3 cut(s) 346, 869, 1879
Bsp1286I GDGCHC 4 cut(s) 754, 870, 1612, 2122
Bsp1720I GCTNAGC 2 cut(s) 975, 1463
Bsp19I CCATGG 1 cut(s) 1487
BspACI CCGC 7 cut(s) 83, 101, 883, 1360, 1467, 1558, 2531
BspCNI CTCAG 7 cut(s) 106, 700, 967, 1429, 2272, 2476, 2569
BspDI ATCGAT 2 cut(s) 520, 1245
BspFNI CGCG 1 cut(s) 85
BspHI TCATGA 1 cut(s) 613
BspLI GGNNCC 3 cut(s) 80, 1142, 1713
BspMI ACCTGC 1 cut(s) 501
BspPI GGATC 8 cut(s) 1205, 1528, 1635, 1656, 1706, 1719, 2141, 2193
BsrDI GCAATG 2 cut(s) 1879, 2325
BsrI ACTGG 8 cut(s) 132, 728, 1168, 1232, 2060, 2137, 2216, 2411
BssECI CCNNGG 5 cut(s) 292, 1144, 1363, 1487, 1880
BssT1I CCWWGG 3 cut(s) 292, 1363, 1487
Bst2UI CCWGG 2 cut(s) 1160, 2192
Bst4CI ACNGT 8 cut(s) 97, 143, 889, 1006, 1189, 1554, 2437, 2572
Bst6I CTCTTC 5 cut(s) 68, 647, 845, 1187, 1945
BstBAI YACGTR 1 cut(s) 1613
BstC8I GCNNGC 6 cut(s) 534, 929, 1424, 2237, 2431, 2529
BstDSI CCRYGG 1 cut(s) 1487
BstF5I GGATG 8 cut(s) 189, 262, 367, 598, 742, 1087, 1332, 2356
BstFNI CGCG 1 cut(s) 85
BstHHI GCGC 1 cut(s) 220
BstMAI GTCTC 4 cut(s) 950, 1199, 1379, 2419
BstMCI CGRYCG 1 cut(s) 524
BstMWI GCNNNNNNNGC 6 cut(s) 98, 463, 891, 1133, 1567, 1607
BstNI CCWGG 2 cut(s) 1160, 2192
BstNSI RCATGY 4 cut(s) 484, 1426, 1644, 2374
BstSCI CCNGG 6 cut(s) 588, 1131, 1143, 1158, 1813, 2190
BstSFI CTRYAG 2 cut(s) 1503, 2571
BstSLI GKGCMC 1 cut(s) 1612
BstUI CGCG 1 cut(s) 85
BstV1I GCAGC 4 cut(s) 466, 966, 1797, 1976
BstV2I GAAGAC 3 cut(s) 1925, 2373, 2481
BstX2I RGATCY 5 cut(s) 11, 499, 1627, 1711, 2146
BstYI RGATCY 5 cut(s) 11, 499, 1627, 1711, 2146
Bsu15I ATCGAT 2 cut(s) 520, 1245
Bsu36I CCTNAGG 1 cut(s) 2259
BsuI GTATCC 2 cut(s) 851, 909
BsuTUI ATCGAT 2 cut(s) 520, 1245
BtgI CCRYGG 1 cut(s) 1487
BtgZI GCGATG 2 cut(s) 243, 1443
BtsCI GGATG 8 cut(s) 189, 262, 367, 598, 742, 1087, 1332, 2356
BtsI GCAGTG 1 cut(s) 1320
BtsIMutI CAGTG 6 cut(s) 148, 1194, 1239, 1320, 2076, 2433
BveI ACCTGC 1 cut(s) 501
Cac8I GCNNGC 6 cut(s) 534, 929, 1424, 2237, 2431, 2529
CaiI CAGNNNCTG 3 cut(s) 959, 2222, 2417
CciI TCATGA 1 cut(s) 613
CfoI GCGC 1 cut(s) 220
Cfr13I GGNCC 5 cut(s) 1141, 1165, 2275, 2358, 2506
ClaI ATCGAT 2 cut(s) 520, 1245
Csp6I GTAC 4 cut(s) 1348, 1587, 2464, 2541
CviQI GTAC 4 cut(s) 1348, 1587, 2464, 2541
DraI TTTAAA 1 cut(s) 391
DriI GACNNNNNGTC 1 cut(s) 1770
EaeI YGGCCR 3 cut(s) 61, 880, 2233
Eam1104I CTCTTC 5 cut(s) 68, 647, 845, 1187, 1945
Eam1105I GACNNNNNGTC 1 cut(s) 1770
EarI CTCTTC 5 cut(s) 68, 647, 845, 1187, 1945
Eco130I CCWWGG 3 cut(s) 292, 1363, 1487
Eco24I GRGCYC 1 cut(s) 870
Eco47I GGWCC 3 cut(s) 1165, 2358, 2506
Eco57I CTGAAG 3 cut(s) 1241, 2439, 2505
Eco81I CCTNAGG 1 cut(s) 2259
Eco88I CYCGRG 3 cut(s) 346, 869, 1879
EcoO109I RGGNCCY 2 cut(s) 2275, 2506
EcoRII CCWGG 2 cut(s) 1158, 2190
EcoT14I CCWWGG 3 cut(s) 292, 1363, 1487
EcoT38I GRGCYC 1 cut(s) 870
ErhI CCWWGG 3 cut(s) 292, 1363, 1487
FalI AAGNNNNNCTT 6 cut(s) 276, 308, 1098, 1130, 2453, 2485
FaqI GGGAC 3 cut(s) 383, 1334, 2411
FauI CCCGC 2 cut(s) 90, 94
FbaI TGATCA 1 cut(s) 186
Fnu4HI GCNGC 8 cut(s) 455, 883, 980, 1360, 1559, 1811, 1965, 2532
FokI GGATG 8 cut(s) 196, 269, 374, 605, 749, 1074, 1339, 2363
FriOI GRGCYC 1 cut(s) 870
Fsp4HI GCNGC 8 cut(s) 455, 883, 980, 1360, 1559, 1811, 1965, 2532
FspBI CTAG 3 cut(s) 119, 798, 2535
GlaI GCGC 1 cut(s) 219
GluI GCNGC 8 cut(s) 455, 883, 980, 1360, 1559, 1811, 1965, 2532
GsaI CCCAGC 4 cut(s) 256, 677, 1672, 2454
GsuI CTGGAG 2 cut(s) 1181, 2394
HapII CCGG 5 cut(s) 181, 590, 1133, 1144, 1814
HhaI GCGC 1 cut(s) 220
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 2 cut(s) 1483, 2269
HindII GTYRAC 2 cut(s) 1483, 2269
HindIII AAGCTT 3 cut(s) 534, 1727, 1952
HpaI GTTAAC 1 cut(s) 1483
HpaII CCGG 5 cut(s) 181, 590, 1133, 1144, 1814
HphI GGTGA 3 cut(s) 56, 486, 2180
Hpy166II GTNNAC 4 cut(s) 550, 1483, 1589, 2269
Hpy8I GTNNAC 4 cut(s) 550, 1483, 1589, 2269
HpyAV CCTTC 5 cut(s) 171, 711, 1535, 2308, 2562
HpyCH4III ACNGT 8 cut(s) 97, 143, 889, 1006, 1189, 1554, 2437, 2572
HpyCH4IV ACGT 2 cut(s) 1612, 2015
HpyF10VI GCNNNNNNNGC 6 cut(s) 98, 463, 891, 1133, 1567, 1607
HpySE526I ACGT 2 cut(s) 1612, 2015
HspAI GCGC 1 cut(s) 218
Ksp22I TGATCA 1 cut(s) 186
KspAI GTTAAC 1 cut(s) 1483
LmnI GCTCC 5 cut(s) 163, 1069, 1469, 2176, 2328
Lsp1109I GCAGC 4 cut(s) 466, 966, 1797, 1976
LweI GCATC 5 cut(s) 145, 1171, 1489, 1655, 1797
MaeI CTAG 3 cut(s) 119, 798, 2535
MaeII ACGT 2 cut(s) 1612, 2015
MaeIII GTNAC 4 cut(s) 134, 1306, 2499, 2566
MfeI CAATTG 1 cut(s) 1073
MflI RGATCY 5 cut(s) 11, 499, 1627, 1711, 2146
MhlI GDGCHC 4 cut(s) 754, 870, 1612, 2122
MlsI TGGCCA 1 cut(s) 2235
MluNI TGGCCA 1 cut(s) 2235
MlyI GAGTC 1 cut(s) 2393
MmeI TCCRAC 2 cut(s) 45, 2423
Mox20I TGGCCA 1 cut(s) 2235
MroXI GAANNNNTTC 3 cut(s) 77, 1729, 2199
MscI TGGCCA 1 cut(s) 2235
MseI TTAA 8 cut(s) 390, 660, 897, 1038, 1482, 1925, 2253, 2300
MslI CAYNNNNRTG 1 cut(s) 1427
Msp20I TGGCCA 1 cut(s) 2235
MspI CCGG 5 cut(s) 181, 590, 1133, 1144, 1814
MspR9I CCNGG 6 cut(s) 590, 1133, 1145, 1160, 1815, 2192
MunI CAATTG 1 cut(s) 1073
Mva1269I GAATGC 1 cut(s) 831
MvaI CCWGG 2 cut(s) 1160, 2192
MvnI CGCG 1 cut(s) 85
MwoI GCNNNNNNNGC 6 cut(s) 98, 463, 891, 1133, 1567, 1607
NciI CCSGG 4 cut(s) 590, 1133, 1145, 1815
NcoI CCATGG 1 cut(s) 1487
NlaIV GGNNCC 3 cut(s) 80, 1142, 1713
NspI RCATGY 4 cut(s) 484, 1426, 1644, 2374
PaeI GCATGC 1 cut(s) 1426
PaeR7I CTCGAG 1 cut(s) 869
PagI TCATGA 1 cut(s) 613
PciI ACATGT 1 cut(s) 2370
PctI GAATGC 1 cut(s) 831
PdmI GAANNNNTTC 3 cut(s) 77, 1729, 2199
PflMI CCANNNNNTGG 1 cut(s) 2156
PfoI TCCNGGA 1 cut(s) 1158
PkrI GCNGC 8 cut(s) 456, 884, 981, 1361, 1560, 1812, 1966, 2533
Ple19I CGATCG 1 cut(s) 524
PleI GAGTC 1 cut(s) 2393
PpsI GAGTC 1 cut(s) 2393
Ppu21I YACGTR 1 cut(s) 1613
PpuMI RGGWCCY 1 cut(s) 2506
PscI ACATGT 1 cut(s) 2370
Psp5II RGGWCCY 1 cut(s) 2506
Psp6I CCWGG 2 cut(s) 1158, 2190
PspFI CCCAGC 4 cut(s) 252, 673, 1668, 2450
PspGI CCWGG 2 cut(s) 1158, 2190
PspN4I GGNNCC 3 cut(s) 80, 1142, 1713
PspPI GGNCC 5 cut(s) 1141, 1165, 2275, 2358, 2506
PspPPI RGGWCCY 1 cut(s) 2506
PspXI VCTCGAGB 1 cut(s) 869
PstNI CAGNNNCTG 3 cut(s) 959, 2222, 2417
PsuI RGATCY 5 cut(s) 11, 499, 1627, 1711, 2146
PvuI CGATCG 1 cut(s) 524
RsaI GTAC 4 cut(s) 1349, 1588, 2465, 2542
RsaNI GTAC 4 cut(s) 1348, 1587, 2464, 2541
RseI CAYNNNNRTG 1 cut(s) 1427
SaqAI TTAA 8 cut(s) 390, 660, 897, 1038, 1482, 1925, 2253, 2300
SatI GCNGC 8 cut(s) 455, 883, 980, 1360, 1559, 1811, 1965, 2532
Sau96I GGNCC 5 cut(s) 1141, 1165, 2275, 2358, 2506
ScaI AGTACT 1 cut(s) 2465
SchI GAGTC 1 cut(s) 2393
ScrFI CCNGG 6 cut(s) 590, 1133, 1145, 1160, 1815, 2192
SduI GDGCHC 4 cut(s) 754, 870, 1612, 2122
SfaNI GCATC 5 cut(s) 145, 1171, 1489, 1655, 1797
SfcI CTRYAG 2 cut(s) 1503, 2571
Sfr274I CTCGAG 1 cut(s) 869
SinI GGWCC 3 cut(s) 1165, 2358, 2506
SlaI CTCGAG 1 cut(s) 869
SmiMI CAYNNNNRTG 1 cut(s) 1427
SmlI CTYRAG 3 cut(s) 174, 646, 869
SmoI CTYRAG 3 cut(s) 174, 646, 869
SphI GCATGC 1 cut(s) 1426
SsiI CCGC 7 cut(s) 83, 101, 883, 1360, 1467, 1558, 2531
SspMI CTAG 3 cut(s) 119, 798, 2535
StyD4I CCNGG 6 cut(s) 588, 1131, 1143, 1158, 1813, 2190
StyI CCWWGG 3 cut(s) 292, 1363, 1487
TaaI ACNGT 8 cut(s) 97, 143, 889, 1006, 1189, 1554, 2437, 2572
TaiI ACGT 2 cut(s) 1615, 2018
TaqI TCGA 7 cut(s) 8, 520, 848, 870, 1245, 1477, 1774
TatI WGTACW 3 cut(s) 1347, 1586, 2463
TauI GCSGC 4 cut(s) 885, 1362, 1561, 2534
Tru1I TTAA 8 cut(s) 390, 660, 897, 1038, 1482, 1925, 2253, 2300
Tru9I TTAA 8 cut(s) 390, 660, 897, 1038, 1482, 1925, 2253, 2300
TscAI CASTG 6 cut(s) 148, 1194, 1239, 1320, 2083, 2440
TseI GCWGC 4 cut(s) 454, 979, 1810, 1964
TspDTI ATGAA 5 cut(s) 602, 609, 1343, 2321, 2379
TspRI CASTG 6 cut(s) 148, 1194, 1239, 1320, 2083, 2440
Van91I CCANNNNNTGG 1 cut(s) 2156
VpaK11BI GGWCC 3 cut(s) 1165, 2358, 2506
XapI RAATTY 3 cut(s) 431, 760, 1717
XceI RCATGY 4 cut(s) 484, 1426, 1644, 2374
XcmI CCANNNNNNNNNTGG 1 cut(s) 2467
XhoI CTCGAG 1 cut(s) 869
XmnI GAANNNNTTC 3 cut(s) 77, 1729, 2199
XspI CTAG 3 cut(s) 119, 798, 2535
ZrmI AGTACT 1 cut(s) 2465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.