TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 1 - 147 | 5.7e-12 | NB-ARC domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 495 |
| AclI | AACGTT | 1 cut(s) | 87 |
| AclWI | GGATC | 3 cut(s) | 203, 273, 284 |
| AcsI | RAATTY | 2 cut(s) | 137, 603 |
| AfaI | GTAC | 2 cut(s) | 41, 234 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 364, 747 |
| AgsI | TTSAA | 5 cut(s) | 65, 102, 362, 608, 640 |
| AjnI | CCWGG | 1 cut(s) | 307 |
| AluBI | AGCT | 5 cut(s) | 60, 271, 383, 616, 627 |
| AluI | AGCT | 5 cut(s) | 60, 271, 383, 616, 627 |
| Alw21I | GWGCWC | 1 cut(s) | 357 |
| Alw26I | GTCTC | 3 cut(s) | 31, 413, 641 |
| AlwI | GGATC | 3 cut(s) | 203, 273, 284 |
| Ama87I | CYCGRG | 1 cut(s) | 410 |
| ApeKI | GCWGC | 1 cut(s) | 380 |
| ApoI | RAATTY | 2 cut(s) | 137, 603 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 105, 137 |
| AspA2I | CCTAGG | 1 cut(s) | 280 |
| AspS9I | GGNCC | 1 cut(s) | 305 |
| AvaI | CYCGRG | 1 cut(s) | 410 |
| AvaII | GGWCC | 1 cut(s) | 305 |
| AvrII | CCTAGG | 1 cut(s) | 280 |
| BbsI | GAAGAC | 1 cut(s) | 23 |
| Bbv12I | GWGCWC | 1 cut(s) | 357 |
| BbvI | GCAGC | 1 cut(s) | 392 |
| BccI | CCATC | 1 cut(s) | 626 |
| BciT130I | CCWGG | 1 cut(s) | 309 |
| BciVI | GTATCC | 1 cut(s) | 361 |
| BcoDI | GTCTC | 3 cut(s) | 31, 413, 641 |
| BfaI | CTAG | 4 cut(s) | 281, 350, 384, 509 |
| BfuI | GTATCC | 1 cut(s) | 361 |
| BisI | GCNGC | 1 cut(s) | 381 |
| BlnI | CCTAGG | 1 cut(s) | 280 |
| BlsI | GCNGC | 1 cut(s) | 382 |
| Bme1390I | CCNGG | 1 cut(s) | 309 |
| Bme18I | GGWCC | 1 cut(s) | 305 |
| BmeT110I | CYCGRG | 1 cut(s) | 410 |
| BmgT120I | GGNCC | 1 cut(s) | 305 |
| BmrFI | CCNGG | 1 cut(s) | 309 |
| BmsI | GCATC | 1 cut(s) | 212 |
| BoxI | GACNNNNGTC | 1 cut(s) | 23 |
| BpiI | GAAGAC | 1 cut(s) | 23 |
| BpuEI | CTTGAG | 3 cut(s) | 55, 139, 457 |
| BsaBI | GATNNNNATC | 1 cut(s) | 255 |
| BsaI | GGTCTC | 1 cut(s) | 31 |
| BsaJI | CCNNGG | 2 cut(s) | 30, 280 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 364, 747 |
| Bse1I | ACTGG | 2 cut(s) | 27, 267 |
| Bse8I | GATNNNNATC | 1 cut(s) | 255 |
| BseBI | CCWGG | 1 cut(s) | 309 |
| BseDI | CCNNGG | 2 cut(s) | 30, 280 |
| BseGI | GGATG | 1 cut(s) | 227 |
| BseJI | GATNNNNATC | 1 cut(s) | 255 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 364, 747 |
| BseNI | ACTGG | 2 cut(s) | 27, 267 |
| BseXI | GCAGC | 1 cut(s) | 392 |
| BsiHKAI | GWGCWC | 1 cut(s) | 357 |
| BsiHKCI | CYCGRG | 1 cut(s) | 410 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 364, 747 |
| BsmAI | GTCTC | 3 cut(s) | 31, 413, 641 |
| Bso31I | GGTCTC | 1 cut(s) | 31 |
| BsoBI | CYCGRG | 1 cut(s) | 410 |
| Bsp1286I | GDGCHC | 1 cut(s) | 357 |
| Bsp1407I | TGTACA | 1 cut(s) | 39 |
| Bsp143I | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| BspACI | CCGC | 1 cut(s) | 495 |
| BspPI | GGATC | 3 cut(s) | 203, 273, 284 |
| BspTNI | GGTCTC | 1 cut(s) | 31 |
| BsrGI | TGTACA | 1 cut(s) | 39 |
| BsrI | ACTGG | 2 cut(s) | 27, 267 |
| BssECI | CCNNGG | 2 cut(s) | 30, 280 |
| BssMI | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| BssT1I | CCWWGG | 2 cut(s) | 30, 280 |
| Bst2UI | CCWGG | 1 cut(s) | 309 |
| Bst4CI | ACNGT | 2 cut(s) | 172, 481 |
| BstAUI | TGTACA | 1 cut(s) | 39 |
| BstC8I | GCNNGC | 1 cut(s) | 429 |
| BstF5I | GGATG | 1 cut(s) | 227 |
| BstKTI | GATC | 5 cut(s) | 198, 259, 268, 292, 469 |
| BstMAI | GTCTC | 3 cut(s) | 31, 413, 641 |
| BstMBI | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| BstNI | CCWGG | 1 cut(s) | 309 |
| BstNSI | RCATGY | 1 cut(s) | 431 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 307 |
| BstV1I | GCAGC | 1 cut(s) | 392 |
| BstV2I | GAAGAC | 1 cut(s) | 23 |
| BstX2I | RGATCY | 1 cut(s) | 289 |
| BstYI | RGATCY | 1 cut(s) | 289 |
| BsuI | GTATCC | 1 cut(s) | 361 |
| BtsCI | GGATG | 1 cut(s) | 227 |
| BtsIMutI | CAGTG | 1 cut(s) | 20 |
| Cac8I | GCNNGC | 1 cut(s) | 429 |
| Cfr13I | GGNCC | 1 cut(s) | 305 |
| Csp6I | GTAC | 2 cut(s) | 40, 233 |
| CviAII | CATG | 3 cut(s) | 275, 428, 705 |
| CviJI | RGCY | 7 cut(s) | 35, 60, 68, 271, 383, 616, 627 |
| CviKI_1 | RGCY | 7 cut(s) | 35, 60, 68, 271, 383, 616, 627 |
| CviQI | GTAC | 2 cut(s) | 40, 233 |
| DpnI | GATC | 5 cut(s) | 197, 258, 267, 291, 468 |
| DpnII | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| Eco130I | CCWWGG | 2 cut(s) | 30, 280 |
| Eco31I | GGTCTC | 1 cut(s) | 31 |
| Eco32I | GATATC | 2 cut(s) | 151, 673 |
| Eco47I | GGWCC | 1 cut(s) | 305 |
| Eco88I | CYCGRG | 1 cut(s) | 410 |
| EcoRII | CCWGG | 1 cut(s) | 307 |
| EcoRV | GATATC | 2 cut(s) | 151, 673 |
| EcoT14I | CCWWGG | 2 cut(s) | 30, 280 |
| ErhI | CCWWGG | 2 cut(s) | 30, 280 |
| FaeI | CATG | 3 cut(s) | 278, 431, 708 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 538, 570 |
| FatI | CATG | 3 cut(s) | 274, 427, 704 |
| Fnu4HI | GCNGC | 1 cut(s) | 381 |
| FokI | GGATG | 1 cut(s) | 234 |
| Fsp4HI | GCNGC | 1 cut(s) | 381 |
| FspBI | CTAG | 4 cut(s) | 281, 350, 384, 509 |
| GluI | GCNGC | 1 cut(s) | 381 |
| Hin1II | CATG | 3 cut(s) | 278, 431, 708 |
| HindIII | AAGCTT | 1 cut(s) | 625 |
| HinfI | GANTC | 2 cut(s) | 439, 744 |
| Hpy166II | GTNNAC | 3 cut(s) | 40, 233, 701 |
| Hpy188I | TCNGA | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 5 cut(s) | 293, 410, 474, 608, 741 |
| Hpy8I | GTNNAC | 3 cut(s) | 40, 233, 701 |
| HpyAV | CCTTC | 3 cut(s) | 368, 649, 717 |
| HpyCH4III | ACNGT | 2 cut(s) | 172, 481 |
| HpyCH4IV | ACGT | 2 cut(s) | 87, 697 |
| HpyCH4V | TGCA | 5 cut(s) | 83, 130, 225, 380, 427 |
| HpySE526I | ACGT | 2 cut(s) | 87, 697 |
| Hsp92II | CATG | 3 cut(s) | 278, 431, 708 |
| Kzo9I | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| LpnPI | CCDG | 5 cut(s) | 8, 248, 294, 321, 733 |
| Lsp1109I | GCAGC | 1 cut(s) | 392 |
| LweI | GCATC | 1 cut(s) | 212 |
| MaeI | CTAG | 4 cut(s) | 281, 350, 384, 509 |
| MaeII | ACGT | 2 cut(s) | 87, 697 |
| MaeIII | GTNAC | 2 cut(s) | 121, 325 |
| MalI | GATC | 5 cut(s) | 197, 258, 267, 291, 468 |
| MboI | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| MboII | GAAGA | 6 cut(s) | 28, 226, 410, 413, 467, 555 |
| MfeI | CAATTG | 1 cut(s) | 344 |
| MflI | RGATCY | 1 cut(s) | 289 |
| MhlI | GDGCHC | 1 cut(s) | 357 |
| MluCI | AATT | 8 cut(s) | 9, 137, 318, 344, 570, 578, 603, 620 |
| MlyI | GAGTC | 1 cut(s) | 433 |
| MnlI | CCTC | 3 cut(s) | 79, 491, 603 |
| MseI | TTAA | 3 cut(s) | 435, 573, 623 |
| MspR9I | CCNGG | 1 cut(s) | 309 |
| MunI | CAATTG | 1 cut(s) | 344 |
| MvaI | CCWGG | 1 cut(s) | 309 |
| NdeII | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| NlaIII | CATG | 3 cut(s) | 278, 431, 708 |
| NmuCI | GTSAC | 1 cut(s) | 121 |
| NspI | RCATGY | 1 cut(s) | 431 |
| PaeI | GCATGC | 1 cut(s) | 431 |
| PaeR7I | CTCGAG | 1 cut(s) | 410 |
| PfeI | GAWTC | 1 cut(s) | 744 |
| PfoI | TCCNGGA | 1 cut(s) | 307 |
| PkrI | GCNGC | 1 cut(s) | 382 |
| PleI | GAGTC | 1 cut(s) | 433 |
| PpsI | GAGTC | 1 cut(s) | 433 |
| PshAI | GACNNNNGTC | 1 cut(s) | 23 |
| Psp1406I | AACGTT | 1 cut(s) | 87 |
| Psp6I | CCWGG | 1 cut(s) | 307 |
| PspGI | CCWGG | 1 cut(s) | 307 |
| PspPI | GGNCC | 1 cut(s) | 305 |
| PsuI | RGATCY | 1 cut(s) | 289 |
| RsaI | GTAC | 2 cut(s) | 41, 234 |
| RsaNI | GTAC | 2 cut(s) | 40, 233 |
| SaqAI | TTAA | 3 cut(s) | 435, 573, 623 |
| SatI | GCNGC | 1 cut(s) | 381 |
| Sau3AI | GATC | 5 cut(s) | 195, 256, 265, 289, 466 |
| Sau96I | GGNCC | 1 cut(s) | 305 |
| SchI | GAGTC | 1 cut(s) | 433 |
| ScrFI | CCNGG | 1 cut(s) | 309 |
| SduI | GDGCHC | 1 cut(s) | 357 |
| SfaNI | GCATC | 1 cut(s) | 212 |
| Sfr274I | CTCGAG | 1 cut(s) | 410 |
| SinI | GGWCC | 1 cut(s) | 305 |
| SlaI | CTCGAG | 1 cut(s) | 410 |
| SmlI | CTYRAG | 4 cut(s) | 70, 154, 410, 472 |
| SmoI | CTYRAG | 4 cut(s) | 70, 154, 410, 472 |
| SphI | GCATGC | 1 cut(s) | 431 |
| Sse9I | AATT | 8 cut(s) | 9, 137, 318, 344, 570, 578, 603, 620 |
| SsiI | CCGC | 1 cut(s) | 495 |
| SspMI | CTAG | 4 cut(s) | 281, 350, 384, 509 |
| StyD4I | CCNGG | 1 cut(s) | 307 |
| StyI | CCWWGG | 2 cut(s) | 30, 280 |
| TaaI | ACNGT | 2 cut(s) | 172, 481 |
| TaiI | ACGT | 2 cut(s) | 90, 700 |
| TaqI | TCGA | 3 cut(s) | 411, 486, 721 |
| TasI | AATT | 8 cut(s) | 9, 137, 318, 344, 570, 578, 603, 620 |
| TatI | WGTACW | 2 cut(s) | 39, 232 |
| TfiI | GAWTC | 1 cut(s) | 744 |
| Tru1I | TTAA | 3 cut(s) | 435, 573, 623 |
| Tru9I | TTAA | 3 cut(s) | 435, 573, 623 |
| TscAI | CASTG | 1 cut(s) | 27 |
| TseFI | GTSAC | 1 cut(s) | 121 |
| TseI | GCWGC | 1 cut(s) | 380 |
| Tsp45I | GTSAC | 1 cut(s) | 121 |
| TspDTI | ATGAA | 3 cut(s) | 407, 411, 468 |
| TspRI | CASTG | 1 cut(s) | 27 |
| VpaK11BI | GGWCC | 1 cut(s) | 305 |
| XapI | RAATTY | 2 cut(s) | 137, 603 |
| XceI | RCATGY | 1 cut(s) | 431 |
| XhoI | CTCGAG | 1 cut(s) | 410 |
| XmaJI | CCTAGG | 1 cut(s) | 280 |
| XspI | CTAG | 4 cut(s) | 281, 350, 384, 509 |