Zinc finger BED domain-containing protein RICESLEEPER
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 2593 |
| AccB1I | GGYRCC | 2 cut(s) | 1349, 2593 |
| AccI | GTMKAC | 3 cut(s) | 1229, 1744, 1866 |
| AccII | CGCG | 2 cut(s) | 2849, 2851 |
| AciI | CCGC | 4 cut(s) | 703, 1815, 2180, 2895 |
| AclWI | GGATC | 4 cut(s) | 13, 656, 893, 2386 |
| AcoI | YGGCCR | 1 cut(s) | 2670 |
| AcsI | RAATTY | 7 cut(s) | 328, 340, 1592, 2410, 2494, 2926, 2961 |
| AcuI | CTGAAG | 2 cut(s) | 811, 1796 |
| AfaI | GTAC | 4 cut(s) | 852, 1569, 2595, 2813 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 316, 1082, 1718, 1793, 1832 |
| AflII | CTTAAG | 1 cut(s) | 1723 |
| AflIII | ACRYGT | 1 cut(s) | 1444 |
| AhlI | ACTAGT | 1 cut(s) | 644 |
| AjnI | CCWGG | 5 cut(s) | 155, 1604, 1792, 2509, 2703 |
| AluBI | AGCT | 9 cut(s) | 748, 806, 1197, 1419, 1460, 1774, 2233, 2243, 2855 |
| AluI | AGCT | 9 cut(s) | 748, 806, 1197, 1419, 1460, 1774, 2233, 2243, 2855 |
| Alw21I | GWGCWC | 1 cut(s) | 2113 |
| Alw26I | GTCTC | 8 cut(s) | 403, 518, 563, 1254, 1550, 1580, 2523, 2657 |
| AlwI | GGATC | 4 cut(s) | 13, 656, 893, 2386 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 185 |
| AoxI | GGCC | 6 cut(s) | 159, 1386, 1819, 2071, 2174, 2670 |
| ApaI | GGGCCC | 2 cut(s) | 1390, 1823 |
| ApeKI | GCWGC | 4 cut(s) | 320, 323, 1460, 2057 |
| ApoI | RAATTY | 7 cut(s) | 328, 340, 1592, 2410, 2494, 2926, 2961 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 605 |
| Asp718I | GGTACC | 1 cut(s) | 2593 |
| AspA2I | CCTAGG | 1 cut(s) | 1076 |
| AspLEI | GCGC | 3 cut(s) | 2008, 2196, 2851 |
| AspS9I | GGNCC | 7 cut(s) | 159, 1386, 1387, 1819, 1820, 2503, 2728 |
| AsuC2I | CCSGG | 1 cut(s) | 2501 |
| AsuHPI | GGTGA | 3 cut(s) | 186, 1065, 1640 |
| AsuII | TTCGAA | 1 cut(s) | 1049 |
| AvaII | GGWCC | 2 cut(s) | 2503, 2728 |
| AvrII | CCTAGG | 1 cut(s) | 1076 |
| BaeGI | GKGCMC | 2 cut(s) | 1390, 1823 |
| BalI | TGGCCA | 1 cut(s) | 2672 |
| BanI | GGYRCC | 2 cut(s) | 1349, 2593 |
| BanII | GRGCYC | 2 cut(s) | 1390, 1823 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 364, 396 |
| BauI | CACGAG | 2 cut(s) | 2226, 2460 |
| BbsI | GAAGAC | 2 cut(s) | 1900, 2223 |
| Bbv12I | GWGCWC | 1 cut(s) | 2113 |
| BbvI | GCAGC | 4 cut(s) | 332, 335, 1447, 2044 |
| BccI | CCATC | 9 cut(s) | 425, 687, 752, 905, 1945, 2270, 2365, 2433, 2584 |
| BciT130I | CCWGG | 5 cut(s) | 157, 1606, 1794, 2511, 2705 |
| BcnI | CCSGG | 1 cut(s) | 2501 |
| BcoDI | GTCTC | 8 cut(s) | 403, 518, 563, 1254, 1550, 1580, 2523, 2657 |
| BcuI | ACTAGT | 1 cut(s) | 644 |
| BfaI | CTAG | 9 cut(s) | 198, 300, 312, 534, 645, 1077, 1548, 2045, 2234 |
| BfmI | CTRYAG | 3 cut(s) | 177, 1014, 2277 |
| BfrI | CTTAAG | 1 cut(s) | 1723 |
| BglII | AGATCT | 5 cut(s) | 50, 293, 725, 1303, 1779 |
| BisI | GCNGC | 4 cut(s) | 321, 324, 1461, 2058 |
| BlnI | CCTAGG | 1 cut(s) | 1076 |
| BlsI | GCNGC | 4 cut(s) | 322, 325, 1462, 2059 |
| Bme1390I | CCNGG | 6 cut(s) | 157, 1606, 1794, 2501, 2511, 2705 |
| Bme18I | GGWCC | 2 cut(s) | 2503, 2728 |
| BmgT120I | GGNCC | 7 cut(s) | 159, 1386, 1387, 1819, 1820, 2503, 2728 |
| BmiI | GGNNCC | 8 cut(s) | 1190, 1351, 1388, 1710, 1820, 1821, 2504, 2595 |
| BmrFI | CCNGG | 6 cut(s) | 157, 1606, 1794, 2501, 2511, 2705 |
| BmrI | ACTGGG | 1 cut(s) | 1260 |
| BmsI | GCATC | 5 cut(s) | 428, 831, 1115, 1789, 2248 |
| BmuI | ACTGGG | 1 cut(s) | 1260 |
| BpiI | GAAGAC | 2 cut(s) | 1900, 2223 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 436, 468 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2721 |
| Bpu14I | TTCGAA | 1 cut(s) | 1049 |
| BpuEI | CTTGAG | 3 cut(s) | 463, 786, 1546 |
| BpuMI | CCSGG | 1 cut(s) | 2501 |
| Bsa29I | ATCGAT | 2 cut(s) | 1543, 2428 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1549 |
| BsaI | GGTCTC | 3 cut(s) | 403, 1550, 2657 |
| BsaJI | CCNNGG | 9 cut(s) | 56, 156, 1076, 1164, 1345, 1464, 1793, 1831, 2667 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 316, 1082, 1718, 1793, 1832 |
| Bse1I | ACTGG | 3 cut(s) | 1266, 1339, 2177 |
| Bse3DI | GCAATG | 2 cut(s) | 1101, 2203 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1549 |
| BseBI | CCWGG | 5 cut(s) | 157, 1606, 1794, 2511, 2705 |
| BseCI | ATCGAT | 2 cut(s) | 1543, 2428 |
| BseDI | CCNNGG | 9 cut(s) | 56, 156, 1076, 1164, 1345, 1464, 1793, 1831, 2667 |
| BseGI | GGATG | 7 cut(s) | 22, 1432, 1804, 1885, 2113, 2665, 2716 |
| BseJI | GATNNNNATC | 1 cut(s) | 1549 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 316, 1082, 1718, 1793, 1832 |
| BseMI | GCAATG | 2 cut(s) | 1101, 2203 |
| BseMII | CTCAG | 7 cut(s) | 24, 513, 558, 1964, 2023, 2112, 2712 |
| BseNI | ACTGG | 3 cut(s) | 1266, 1339, 2177 |
| BseSI | GKGCMC | 2 cut(s) | 1390, 1823 |
| BseXI | GCAGC | 4 cut(s) | 332, 335, 1447, 2044 |
| BsgI | GTGCAG | 1 cut(s) | 2042 |
| Bsh1236I | CGCG | 2 cut(s) | 2849, 2851 |
| BshFI | GGCC | 6 cut(s) | 161, 1388, 1821, 2073, 2176, 2672 |
| BshNI | GGYRCC | 2 cut(s) | 1349, 2593 |
| BshVI | ATCGAT | 2 cut(s) | 1543, 2428 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2113 |
| BsiSI | CCGG | 1 cut(s) | 2500 |
| BslFI | GGGAC | 3 cut(s) | 1248, 2130, 2516 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 316, 1082, 1718, 1793, 1832 |
| BsmAI | GTCTC | 8 cut(s) | 403, 518, 563, 1254, 1550, 1580, 2523, 2657 |
| BsmFI | GGGAC | 3 cut(s) | 1248, 2130, 2516 |
| BsmI | GAATGC | 1 cut(s) | 794 |
| BsnI | GGCC | 6 cut(s) | 161, 1388, 1821, 2073, 2176, 2672 |
| Bso31I | GGTCTC | 3 cut(s) | 403, 1550, 2657 |
| Bsp119I | TTCGAA | 1 cut(s) | 1049 |
| Bsp120I | GGGCCC | 2 cut(s) | 1386, 1819 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1390, 1823, 2113 |
| Bsp1407I | TGTACA | 1 cut(s) | 850 |
| BspACI | CCGC | 4 cut(s) | 703, 1815, 2180, 2895 |
| BspANI | GGCC | 6 cut(s) | 161, 1388, 1821, 2073, 2176, 2672 |
| BspCNI | CTCAG | 7 cut(s) | 25, 514, 559, 1965, 2022, 2113, 2713 |
| BspDI | ATCGAT | 2 cut(s) | 1543, 2428 |
| BspFNI | CGCG | 2 cut(s) | 2849, 2851 |
| BspHI | TCATGA | 1 cut(s) | 985 |
| BspLI | GGNNCC | 8 cut(s) | 1190, 1351, 1388, 1710, 1820, 1821, 2504, 2595 |
| BspMAI | CTGCAG | 2 cut(s) | 181, 2281 |
| BspPI | GGATC | 4 cut(s) | 13, 656, 893, 2386 |
| BspQI | GCTCTTC | 1 cut(s) | 2250 |
| BspT104I | TTCGAA | 1 cut(s) | 1049 |
| BspT107I | GGYRCC | 2 cut(s) | 1349, 2593 |
| BspTI | CTTAAG | 1 cut(s) | 1723 |
| BspTNI | GGTCTC | 3 cut(s) | 403, 1550, 2657 |
| BsrDI | GCAATG | 2 cut(s) | 1101, 2203 |
| BsrGI | TGTACA | 1 cut(s) | 850 |
| BsrI | ACTGG | 3 cut(s) | 1266, 1339, 2177 |
| BssECI | CCNNGG | 9 cut(s) | 56, 156, 1076, 1164, 1345, 1464, 1793, 1831, 2667 |
| BssNAI | GTATAC | 1 cut(s) | 1745 |
| BssSI | CACGAG | 2 cut(s) | 2226, 2460 |
| BssT1I | CCWWGG | 4 cut(s) | 1076, 1164, 1345, 1831 |
| Bst1107I | GTATAC | 1 cut(s) | 1745 |
| Bst2BI | CACGAG | 2 cut(s) | 2226, 2460 |
| Bst2UI | CCWGG | 5 cut(s) | 157, 1606, 1794, 2511, 2705 |
| Bst6I | CTCTTC | 4 cut(s) | 15, 710, 2250, 2521 |
| BstAFI | CTTAAG | 1 cut(s) | 1723 |
| BstAUI | TGTACA | 1 cut(s) | 850 |
| BstBI | TTCGAA | 1 cut(s) | 1049 |
| BstC8I | GCNNGC | 2 cut(s) | 1649, 2853 |
| BstDSI | CCRYGG | 1 cut(s) | 2667 |
| BstEII | GGTNACC | 1 cut(s) | 1628 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1080, 1830 |
| BstF5I | GGATG | 7 cut(s) | 22, 1432, 1804, 1885, 2113, 2665, 2716 |
| BstFNI | CGCG | 2 cut(s) | 2849, 2851 |
| BstHHI | GCGC | 3 cut(s) | 2008, 2196, 2851 |
| BstMAI | GTCTC | 8 cut(s) | 403, 518, 563, 1254, 1550, 1580, 2523, 2657 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1827, 1851 |
| BstNI | CCWGG | 5 cut(s) | 157, 1606, 1794, 2511, 2705 |
| BstNSI | RCATGY | 2 cut(s) | 551, 1448 |
| BstPI | GGTNACC | 1 cut(s) | 1628 |
| BstSCI | CCNGG | 6 cut(s) | 155, 1604, 1792, 2499, 2509, 2703 |
| BstSFI | CTRYAG | 3 cut(s) | 177, 1014, 2277 |
| BstSLI | GKGCMC | 2 cut(s) | 1390, 1823 |
| BstUI | CGCG | 2 cut(s) | 2849, 2851 |
| BstV1I | GCAGC | 4 cut(s) | 332, 335, 1447, 2044 |
| BstV2I | GAAGAC | 2 cut(s) | 1900, 2223 |
| BstX2I | RGATCY | 7 cut(s) | 50, 293, 661, 725, 1303, 1779, 2378 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1252 |
| BstYI | RGATCY | 7 cut(s) | 50, 293, 661, 725, 1303, 1779, 2378 |
| BstZ17I | GTATAC | 1 cut(s) | 1745 |
| Bsu15I | ATCGAT | 2 cut(s) | 1543, 2428 |
| BsuRI | GGCC | 6 cut(s) | 161, 1388, 1821, 2073, 2176, 2672 |
| BsuTUI | ATCGAT | 2 cut(s) | 1543, 2428 |
| BtgI | CCRYGG | 1 cut(s) | 2667 |
| BtsCI | GGATG | 7 cut(s) | 22, 1432, 1804, 1885, 2113, 2665, 2716 |
| BtsI | GCAGTG | 2 cut(s) | 1699, 2906 |
| BtsIMutI | CAGTG | 7 cut(s) | 941, 1170, 1402, 1699, 2574, 2673, 2906 |
| Cac8I | GCNNGC | 2 cut(s) | 1649, 2853 |
| CaiI | CAGNNNCTG | 1 cut(s) | 185 |
| CciI | TCATGA | 1 cut(s) | 985 |
| CfoI | GCGC | 3 cut(s) | 2008, 2196, 2851 |
| Cfr13I | GGNCC | 7 cut(s) | 159, 1386, 1387, 1819, 1820, 2503, 2728 |
| ClaI | ATCGAT | 2 cut(s) | 1543, 2428 |
| CseI | GACGC | 1 cut(s) | 191 |
| CsiI | ACCWGGT | 2 cut(s) | 2509, 2703 |
| Csp6I | GTAC | 4 cut(s) | 851, 1568, 2594, 2812 |
| CviAII | CATG | 8 cut(s) | 163, 548, 742, 986, 1445, 1704, 1912, 2153 |
| CviQI | GTAC | 4 cut(s) | 851, 1568, 2594, 2812 |
| DraI | TTTAAA | 1 cut(s) | 420 |
| EaeI | YGGCCR | 1 cut(s) | 2670 |
| Eam1104I | CTCTTC | 4 cut(s) | 15, 710, 2250, 2521 |
| EarI | CTCTTC | 4 cut(s) | 15, 710, 2250, 2521 |
| EciI | GGCGGA | 1 cut(s) | 2169 |
| Eco130I | CCWWGG | 4 cut(s) | 1076, 1164, 1345, 1831 |
| Eco24I | GRGCYC | 2 cut(s) | 1390, 1823 |
| Eco31I | GGTCTC | 3 cut(s) | 403, 1550, 2657 |
| Eco32I | GATATC | 2 cut(s) | 1071, 1618 |
| Eco47I | GGWCC | 2 cut(s) | 2503, 2728 |
| Eco57I | CTGAAG | 2 cut(s) | 811, 1796 |
| Eco91I | GGTNACC | 1 cut(s) | 1628 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1080, 1830 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1387, 1819, 2503 |
| EcoO65I | GGTNACC | 1 cut(s) | 1628 |
| EcoRII | CCWGG | 5 cut(s) | 155, 1604, 1792, 2509, 2703 |
| EcoRV | GATATC | 2 cut(s) | 1071, 1618 |
| EcoT14I | CCWWGG | 4 cut(s) | 1076, 1164, 1345, 1831 |
| EcoT22I | ATGCAT | 1 cut(s) | 2869 |
| EcoT38I | GRGCYC | 2 cut(s) | 1390, 1823 |
| ErhI | CCWWGG | 4 cut(s) | 1076, 1164, 1345, 1831 |
| FaeI | CATG | 8 cut(s) | 166, 551, 745, 989, 1448, 1707, 1915, 2156 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2232, 2264 |
| FaqI | GGGAC | 3 cut(s) | 1248, 2130, 2516 |
| FatI | CATG | 8 cut(s) | 162, 547, 741, 985, 1444, 1703, 1911, 2152 |
| FauI | CCCGC | 2 cut(s) | 1808, 2888 |
| FblI | GTMKAC | 3 cut(s) | 1229, 1744, 1866 |
| Fnu4HI | GCNGC | 4 cut(s) | 321, 324, 1461, 2058 |
| FokI | GGATG | 7 cut(s) | 29, 1419, 1811, 1892, 2100, 2672, 2703 |
| FriOI | GRGCYC | 2 cut(s) | 1390, 1823 |
| Fsp4HI | GCNGC | 4 cut(s) | 321, 324, 1461, 2058 |
| FspBI | CTAG | 9 cut(s) | 198, 300, 312, 534, 645, 1077, 1548, 2045, 2234 |
| GlaI | GCGC | 3 cut(s) | 2007, 2195, 2850 |
| GluI | GCNGC | 4 cut(s) | 321, 324, 1461, 2058 |
| HaeIII | GGCC | 6 cut(s) | 161, 1388, 1821, 2073, 2176, 2672 |
| HapII | CCGG | 1 cut(s) | 2500 |
| HgaI | GACGC | 1 cut(s) | 191 |
| HhaI | GCGC | 3 cut(s) | 2008, 2196, 2851 |
| Hin1II | CATG | 8 cut(s) | 166, 551, 745, 989, 1448, 1707, 1915, 2156 |
| Hin6I | GCGC | 3 cut(s) | 2006, 2194, 2849 |
| HinP1I | GCGC | 3 cut(s) | 2006, 2194, 2849 |
| HincII | GTYRAC | 4 cut(s) | 265, 1332, 1369, 1867 |
| HindII | GTYRAC | 4 cut(s) | 265, 1332, 1369, 1867 |
| HindIII | AAGCTT | 1 cut(s) | 1417 |
| HpaI | GTTAAC | 1 cut(s) | 1369 |
| HpaII | CCGG | 1 cut(s) | 2500 |
| HphI | GGTGA | 3 cut(s) | 186, 1065, 1640 |
| HpyAV | CCTTC | 9 cut(s) | 255, 616, 857, 1480, 1672, 1992, 2084, 2127, 2617 |
| HpyCH4IV | ACGT | 2 cut(s) | 597, 783 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1827, 1851 |
| HpySE526I | ACGT | 2 cut(s) | 597, 783 |
| Hsp92II | CATG | 8 cut(s) | 166, 551, 745, 989, 1448, 1707, 1915, 2156 |
| HspAI | GCGC | 3 cut(s) | 2006, 2194, 2849 |
| KpnI | GGTACC | 1 cut(s) | 2597 |
| KspAI | GTTAAC | 1 cut(s) | 1369 |
| LguI | GCTCTTC | 1 cut(s) | 2250 |
| LmnI | GCTCC | 2 cut(s) | 1188, 2489 |
| Lsp1109I | GCAGC | 4 cut(s) | 332, 335, 1447, 2044 |
| LweI | GCATC | 5 cut(s) | 428, 831, 1115, 1789, 2248 |
| MabI | ACCWGGT | 2 cut(s) | 2509, 2703 |
| MaeI | CTAG | 9 cut(s) | 198, 300, 312, 534, 645, 1077, 1548, 2045, 2234 |
| MaeII | ACGT | 2 cut(s) | 597, 783 |
| MaeIII | GTNAC | 7 cut(s) | 1060, 1168, 1375, 1628, 1694, 1727, 2696 |
| MfeI | CAATTG | 4 cut(s) | 515, 710, 817, 1713 |
| MflI | RGATCY | 7 cut(s) | 50, 293, 661, 725, 1303, 1779, 2378 |
| MhlI | GDGCHC | 3 cut(s) | 1390, 1823, 2113 |
| MlsI | TGGCCA | 1 cut(s) | 2672 |
| MluNI | TGGCCA | 1 cut(s) | 2672 |
| MlyI | GAGTC | 4 cut(s) | 727, 1235, 1862, 2908 |
| MmeI | TCCRAC | 4 cut(s) | 955, 1655, 2356, 2803 |
| Mox20I | TGGCCA | 1 cut(s) | 2672 |
| Mph1103I | ATGCAT | 1 cut(s) | 2869 |
| MroXI | GAANNNNTTC | 1 cut(s) | 605 |
| MscI | TGGCCA | 1 cut(s) | 2672 |
| MseI | TTAA | 7 cut(s) | 419, 483, 1088, 1368, 1421, 1724, 1931 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1581, 2448 |
| Msp20I | TGGCCA | 1 cut(s) | 2672 |
| MspA1I | CMGCKG | 1 cut(s) | 2895 |
| MspCI | CTTAAG | 1 cut(s) | 1723 |
| MspI | CCGG | 1 cut(s) | 2500 |
| MspR9I | CCNGG | 6 cut(s) | 157, 1606, 1794, 2501, 2511, 2705 |
| MunI | CAATTG | 4 cut(s) | 515, 710, 817, 1713 |
| Mva1269I | GAATGC | 1 cut(s) | 794 |
| MvaI | CCWGG | 5 cut(s) | 157, 1606, 1794, 2511, 2705 |
| MvnI | CGCG | 2 cut(s) | 2849, 2851 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1827, 1851 |
| NciI | CCSGG | 1 cut(s) | 2501 |
| NlaIII | CATG | 8 cut(s) | 166, 551, 745, 989, 1448, 1707, 1915, 2156 |
| NlaIV | GGNNCC | 8 cut(s) | 1190, 1351, 1388, 1710, 1820, 1821, 2504, 2595 |
| NmeAIII | GCCGAG | 1 cut(s) | 1489 |
| NmuCI | GTSAC | 5 cut(s) | 1168, 1375, 1628, 1694, 2696 |
| NsiI | ATGCAT | 1 cut(s) | 2869 |
| NspI | RCATGY | 2 cut(s) | 551, 1448 |
| NspV | TTCGAA | 1 cut(s) | 1049 |
| PagI | TCATGA | 1 cut(s) | 985 |
| PciI | ACATGT | 1 cut(s) | 1444 |
| PciSI | GCTCTTC | 1 cut(s) | 2250 |
| PctI | GAATGC | 1 cut(s) | 794 |
| PdmI | GAANNNNTTC | 1 cut(s) | 605 |
| PfeI | GAWTC | 9 cut(s) | 67, 134, 227, 580, 667, 1429, 2125, 2473, 2733 |
| PfoI | TCCNGGA | 2 cut(s) | 1604, 2499 |
| PkrI | GCNGC | 4 cut(s) | 322, 325, 1462, 2059 |
| PleI | GAGTC | 4 cut(s) | 726, 1234, 1862, 2908 |
| PpsI | GAGTC | 4 cut(s) | 726, 1234, 1862, 2908 |
| PpuMI | RGGWCCY | 1 cut(s) | 2503 |
| PscI | ACATGT | 1 cut(s) | 1444 |
| Psp5II | RGGWCCY | 1 cut(s) | 2503 |
| Psp6I | CCWGG | 5 cut(s) | 155, 1604, 1792, 2509, 2703 |
| PspEI | GGTNACC | 1 cut(s) | 1628 |
| PspGI | CCWGG | 5 cut(s) | 155, 1604, 1792, 2509, 2703 |
| PspN4I | GGNNCC | 8 cut(s) | 1190, 1351, 1388, 1710, 1820, 1821, 2504, 2595 |
| PspOMI | GGGCCC | 2 cut(s) | 1386, 1819 |
| PspPI | GGNCC | 7 cut(s) | 159, 1386, 1387, 1819, 1820, 2503, 2728 |
| PspPPI | RGGWCCY | 1 cut(s) | 2503 |
| PstI | CTGCAG | 2 cut(s) | 181, 2281 |
| PstNI | CAGNNNCTG | 1 cut(s) | 185 |
| PsuI | RGATCY | 7 cut(s) | 50, 293, 661, 725, 1303, 1779, 2378 |
| RsaI | GTAC | 4 cut(s) | 852, 1569, 2595, 2813 |
| RsaNI | GTAC | 4 cut(s) | 851, 1568, 2594, 2812 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1581, 2448 |
| SalI | GTCGAC | 1 cut(s) | 1865 |
| SapI | GCTCTTC | 1 cut(s) | 2250 |
| SaqAI | TTAA | 7 cut(s) | 419, 483, 1088, 1368, 1421, 1724, 1931 |
| SatI | GCNGC | 4 cut(s) | 321, 324, 1461, 2058 |
| Sau96I | GGNCC | 7 cut(s) | 159, 1386, 1387, 1819, 1820, 2503, 2728 |
| SchI | GAGTC | 4 cut(s) | 727, 1235, 1862, 2908 |
| ScrFI | CCNGG | 6 cut(s) | 157, 1606, 1794, 2501, 2511, 2705 |
| SduI | GDGCHC | 3 cut(s) | 1390, 1823, 2113 |
| SexAI | ACCWGGT | 2 cut(s) | 2509, 2703 |
| SfaNI | GCATC | 5 cut(s) | 428, 831, 1115, 1789, 2248 |
| SfcI | CTRYAG | 3 cut(s) | 177, 1014, 2277 |
| SfuI | TTCGAA | 1 cut(s) | 1049 |
| SinI | GGWCC | 2 cut(s) | 2503, 2728 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1581, 2448 |
| SmlI | CTYRAG | 4 cut(s) | 442, 801, 1561, 1723 |
| SmoI | CTYRAG | 4 cut(s) | 442, 801, 1561, 1723 |
| SpeI | ACTAGT | 1 cut(s) | 644 |
| SsiI | CCGC | 4 cut(s) | 703, 1815, 2180, 2895 |
| SspMI | CTAG | 9 cut(s) | 198, 300, 312, 534, 645, 1077, 1548, 2045, 2234 |
| StyD4I | CCNGG | 6 cut(s) | 155, 1604, 1792, 2499, 2509, 2703 |
| StyI | CCWWGG | 4 cut(s) | 1076, 1164, 1345, 1831 |
| TaiI | ACGT | 2 cut(s) | 600, 786 |
| TaqI | TCGA | 7 cut(s) | 8, 1049, 1521, 1543, 1866, 2086, 2428 |
| TaqII | GACCGA | 1 cut(s) | 2745 |
| TatI | WGTACW | 1 cut(s) | 850 |
| TfiI | GAWTC | 9 cut(s) | 67, 134, 227, 580, 667, 1429, 2125, 2473, 2733 |
| Tru1I | TTAA | 7 cut(s) | 419, 483, 1088, 1368, 1421, 1724, 1931 |
| Tru9I | TTAA | 7 cut(s) | 419, 483, 1088, 1368, 1421, 1724, 1931 |
| TscAI | CASTG | 7 cut(s) | 941, 1177, 1402, 1699, 2574, 2680, 2913 |
| TseFI | GTSAC | 5 cut(s) | 1168, 1375, 1628, 1694, 2696 |
| TseI | GCWGC | 4 cut(s) | 320, 323, 1460, 2057 |
| Tsp45I | GTSAC | 5 cut(s) | 1168, 1375, 1628, 1694, 2696 |
| TspRI | CASTG | 7 cut(s) | 941, 1177, 1402, 1699, 2574, 2680, 2913 |
| Vha464I | CTTAAG | 1 cut(s) | 1723 |
| VpaK11BI | GGWCC | 2 cut(s) | 2503, 2728 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1080, 1830 |
| XapI | RAATTY | 7 cut(s) | 328, 340, 1592, 2410, 2494, 2926, 2961 |
| XbaI | TCTAGA | 1 cut(s) | 1547 |
| XceI | RCATGY | 2 cut(s) | 551, 1448 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 391, 1838 |
| XmaJI | CCTAGG | 1 cut(s) | 1076 |
| XmiI | GTMKAC | 3 cut(s) | 1229, 1744, 1866 |
| XmnI | GAANNNNTTC | 1 cut(s) | 605 |
| XspI | CTAG | 9 cut(s) | 198, 300, 312, 534, 645, 1077, 1548, 2045, 2234 |
| Zsp2I | ATGCAT | 1 cut(s) | 2869 |