Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 103 - 187 | 9.7e-28 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 253 |
| AccI | GTMKAC | 1 cut(s) | 169 |
| AciI | CCGC | 1 cut(s) | 251 |
| AclWI | GGATC | 1 cut(s) | 321 |
| AcsI | RAATTY | 1 cut(s) | 614 |
| AcuI | CTGAAG | 1 cut(s) | 306 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 181 |
| AgsI | TTSAA | 8 cut(s) | 13, 204, 278, 397, 438, 443, 605, 690 |
| AjnI | CCWGG | 1 cut(s) | 104 |
| AluBI | AGCT | 7 cut(s) | 329, 340, 385, 422, 530, 634, 665 |
| AluI | AGCT | 7 cut(s) | 329, 340, 385, 422, 530, 634, 665 |
| Alw21I | GWGCWC | 2 cut(s) | 342, 650 |
| AlwI | GGATC | 1 cut(s) | 321 |
| AoxI | GGCC | 1 cut(s) | 456 |
| ApeKI | GCWGC | 2 cut(s) | 329, 413 |
| ApoI | RAATTY | 1 cut(s) | 614 |
| AspS9I | GGNCC | 1 cut(s) | 725 |
| AsuHPI | GGTGA | 1 cut(s) | 92 |
| AvaII | GGWCC | 1 cut(s) | 725 |
| BanII | GRGCYC | 1 cut(s) | 342 |
| Bbv12I | GWGCWC | 2 cut(s) | 342, 650 |
| BbvCI | CCTCAGC | 1 cut(s) | 531 |
| BbvI | GCAGC | 2 cut(s) | 316, 425 |
| BccI | CCATC | 3 cut(s) | 25, 155, 196 |
| BciT130I | CCWGG | 1 cut(s) | 106 |
| BciVI | GTATCC | 1 cut(s) | 411 |
| BclI | TGATCA | 1 cut(s) | 139 |
| BfaI | CTAG | 3 cut(s) | 423, 635, 657 |
| BfmI | CTRYAG | 1 cut(s) | 176 |
| BfuI | GTATCC | 1 cut(s) | 411 |
| BisI | GCNGC | 2 cut(s) | 330, 414 |
| BlsI | GCNGC | 2 cut(s) | 331, 415 |
| Bme1390I | CCNGG | 1 cut(s) | 106 |
| Bme18I | GGWCC | 1 cut(s) | 725 |
| BmgT120I | GGNCC | 1 cut(s) | 725 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BmrFI | CCNGG | 1 cut(s) | 106 |
| BmrI | ACTGGG | 1 cut(s) | 489 |
| BmsI | GCATC | 1 cut(s) | 555 |
| BmuI | ACTGGG | 1 cut(s) | 489 |
| Bpu10I | CCTNAGC | 1 cut(s) | 531 |
| Bsa29I | ATCGAT | 1 cut(s) | 345 |
| BsaJI | CCNNGG | 2 cut(s) | 105, 459 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 181 |
| Bse1I | ACTGG | 2 cut(s) | 404, 484 |
| BseBI | CCWGG | 1 cut(s) | 106 |
| BseCI | ATCGAT | 1 cut(s) | 345 |
| BseDI | CCNNGG | 2 cut(s) | 105, 459 |
| BseGI | GGATG | 3 cut(s) | 366, 433, 546 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BseMII | CTCAG | 2 cut(s) | 268, 522 |
| BseNI | ACTGG | 2 cut(s) | 404, 484 |
| BseRI | GAGGAG | 1 cut(s) | 101 |
| BseXI | GCAGC | 2 cut(s) | 316, 425 |
| BshFI | GGCC | 1 cut(s) | 458 |
| BshVI | ATCGAT | 1 cut(s) | 345 |
| BsiHKAI | GWGCWC | 2 cut(s) | 342, 650 |
| BslFI | GGGAC | 1 cut(s) | 549 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 181 |
| BsmFI | GGGAC | 1 cut(s) | 549 |
| BsnI | GGCC | 1 cut(s) | 458 |
| Bsp1286I | GDGCHC | 2 cut(s) | 342, 650 |
| Bsp143I | GATC | 3 cut(s) | 111, 139, 313 |
| BspACI | CCGC | 1 cut(s) | 251 |
| BspANI | GGCC | 1 cut(s) | 458 |
| BspCNI | CTCAG | 2 cut(s) | 267, 523 |
| BspDI | ATCGAT | 1 cut(s) | 345 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 321 |
| BsrBI | CCGCTC | 1 cut(s) | 253 |
| BsrI | ACTGG | 2 cut(s) | 404, 484 |
| BssECI | CCNNGG | 2 cut(s) | 105, 459 |
| BssMI | GATC | 3 cut(s) | 111, 139, 313 |
| Bst2UI | CCWGG | 1 cut(s) | 106 |
| Bst4CI | ACNGT | 3 cut(s) | 211, 454, 500 |
| Bst6I | CTCTTC | 1 cut(s) | 282 |
| BstDEI | CTNAG | 2 cut(s) | 254, 531 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 179 |
| BstF5I | GGATG | 3 cut(s) | 366, 433, 546 |
| BstKTI | GATC | 3 cut(s) | 114, 142, 316 |
| BstMBI | GATC | 3 cut(s) | 111, 139, 313 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 213, 419 |
| BstNI | CCWGG | 1 cut(s) | 106 |
| BstSCI | CCNGG | 1 cut(s) | 104 |
| BstSFI | CTRYAG | 1 cut(s) | 176 |
| BstV1I | GCAGC | 2 cut(s) | 316, 425 |
| Bsu15I | ATCGAT | 1 cut(s) | 345 |
| BsuI | GTATCC | 1 cut(s) | 411 |
| BsuRI | GGCC | 1 cut(s) | 458 |
| BsuTUI | ATCGAT | 1 cut(s) | 345 |
| BtsCI | GGATG | 3 cut(s) | 366, 433, 546 |
| BtsI | GCAGTG | 1 cut(s) | 714 |
| BtsIMutI | CAGTG | 3 cut(s) | 207, 459, 714 |
| Cfr13I | GGNCC | 1 cut(s) | 725 |
| ClaI | ATCGAT | 1 cut(s) | 345 |
| CviAII | CATG | 1 cut(s) | 641 |
| CviJI | RGCY | 9 cut(s) | 187, 329, 340, 385, 422, 458, 530, 634, 665 |
| CviKI_1 | RGCY | 9 cut(s) | 187, 329, 340, 385, 422, 458, 530, 634, 665 |
| DdeI | CTNAG | 2 cut(s) | 254, 531 |
| DpnI | GATC | 3 cut(s) | 113, 141, 315 |
| DpnII | GATC | 3 cut(s) | 111, 139, 313 |
| Eam1104I | CTCTTC | 1 cut(s) | 282 |
| EarI | CTCTTC | 1 cut(s) | 282 |
| Ecl136II | GAGCTC | 1 cut(s) | 340 |
| Eco24I | GRGCYC | 1 cut(s) | 342 |
| Eco47I | GGWCC | 1 cut(s) | 725 |
| Eco53kI | GAGCTC | 1 cut(s) | 340 |
| Eco57I | CTGAAG | 1 cut(s) | 306 |
| EcoICRI | GAGCTC | 1 cut(s) | 340 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 179 |
| EcoRI | GAATTC | 1 cut(s) | 614 |
| EcoRII | CCWGG | 1 cut(s) | 104 |
| EcoT38I | GRGCYC | 1 cut(s) | 342 |
| FaeI | CATG | 1 cut(s) | 644 |
| FaiI | YATR | 9 cut(s) | 127, 129, 138, 147, 376, 587, 612, 621, 642 |
| FaqI | GGGAC | 1 cut(s) | 549 |
| FatI | CATG | 1 cut(s) | 640 |
| FbaI | TGATCA | 1 cut(s) | 139 |
| FblI | GTMKAC | 1 cut(s) | 169 |
| Fnu4HI | GCNGC | 2 cut(s) | 330, 414 |
| FokI | GGATG | 3 cut(s) | 353, 440, 533 |
| FriOI | GRGCYC | 1 cut(s) | 342 |
| Fsp4HI | GCNGC | 2 cut(s) | 330, 414 |
| FspBI | CTAG | 3 cut(s) | 423, 635, 657 |
| GluI | GCNGC | 2 cut(s) | 330, 414 |
| HaeIII | GGCC | 1 cut(s) | 458 |
| Hin1II | CATG | 1 cut(s) | 644 |
| HincII | GTYRAC | 1 cut(s) | 496 |
| HindII | GTYRAC | 1 cut(s) | 496 |
| HinfI | GANTC | 1 cut(s) | 464 |
| HphI | GGTGA | 1 cut(s) | 92 |
| Hpy166II | GTNNAC | 4 cut(s) | 170, 450, 496, 677 |
| Hpy188I | TCNGA | 1 cut(s) | 463 |
| Hpy188III | TCNNGA | 3 cut(s) | 278, 550, 690 |
| Hpy8I | GTNNAC | 4 cut(s) | 170, 450, 496, 677 |
| HpyAV | CCTTC | 6 cut(s) | 65, 131, 175, 234, 617, 696 |
| HpyCH4III | ACNGT | 3 cut(s) | 211, 454, 500 |
| HpyCH4V | TGCA | 4 cut(s) | 332, 546, 578, 597 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 213, 419 |
| HpyF3I | CTNAG | 2 cut(s) | 254, 531 |
| Hsp92II | CATG | 1 cut(s) | 644 |
| Ksp22I | TGATCA | 1 cut(s) | 139 |
| Kzo9I | GATC | 3 cut(s) | 111, 139, 313 |
| LmnI | GCTCC | 3 cut(s) | 184, 243, 337 |
| LpnPI | CCDG | 5 cut(s) | 91, 118, 417, 465, 563 |
| Lsp1109I | GCAGC | 2 cut(s) | 316, 425 |
| LweI | GCATC | 1 cut(s) | 555 |
| MaeI | CTAG | 3 cut(s) | 423, 635, 657 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MalI | GATC | 3 cut(s) | 113, 141, 315 |
| MbiI | CCGCTC | 1 cut(s) | 253 |
| MboI | GATC | 3 cut(s) | 111, 139, 313 |
| MboII | GAAGA | 4 cut(s) | 111, 192, 277, 299 |
| MfeI | CAATTG | 1 cut(s) | 600 |
| MhlI | GDGCHC | 2 cut(s) | 342, 650 |
| MluCI | AATT | 6 cut(s) | 259, 392, 438, 553, 600, 614 |
| MlyI | GAGTC | 1 cut(s) | 473 |
| MnlI | CCTC | 8 cut(s) | 79, 82, 158, 283, 469, 526, 574, 690 |
| MseI | TTAA | 2 cut(s) | 63, 515 |
| MspA1I | CMGCKG | 1 cut(s) | 530 |
| MspR9I | CCNGG | 1 cut(s) | 106 |
| MunI | CAATTG | 1 cut(s) | 600 |
| MvaI | CCWGG | 1 cut(s) | 106 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 213, 419 |
| NdeII | GATC | 3 cut(s) | 111, 139, 313 |
| NlaIII | CATG | 1 cut(s) | 644 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| NmuCI | GTSAC | 1 cut(s) | 49 |
| PkrI | GCNGC | 2 cut(s) | 331, 415 |
| PleI | GAGTC | 1 cut(s) | 472 |
| PpsI | GAGTC | 1 cut(s) | 472 |
| Psp124BI | GAGCTC | 1 cut(s) | 342 |
| Psp6I | CCWGG | 1 cut(s) | 104 |
| PspGI | CCWGG | 1 cut(s) | 104 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PspPI | GGNCC | 1 cut(s) | 725 |
| PvuII | CAGCTG | 1 cut(s) | 530 |
| SacI | GAGCTC | 1 cut(s) | 342 |
| SaqAI | TTAA | 2 cut(s) | 63, 515 |
| SatI | GCNGC | 2 cut(s) | 330, 414 |
| Sau3AI | GATC | 3 cut(s) | 111, 139, 313 |
| Sau96I | GGNCC | 1 cut(s) | 725 |
| SchI | GAGTC | 1 cut(s) | 473 |
| ScrFI | CCNGG | 1 cut(s) | 106 |
| SduI | GDGCHC | 2 cut(s) | 342, 650 |
| SfaNI | GCATC | 1 cut(s) | 555 |
| SfcI | CTRYAG | 1 cut(s) | 176 |
| SinI | GGWCC | 1 cut(s) | 725 |
| Sse9I | AATT | 6 cut(s) | 259, 392, 438, 553, 600, 614 |
| SsiI | CCGC | 1 cut(s) | 251 |
| SspMI | CTAG | 3 cut(s) | 423, 635, 657 |
| SstI | GAGCTC | 1 cut(s) | 342 |
| StyD4I | CCNGG | 1 cut(s) | 104 |
| TaaI | ACNGT | 3 cut(s) | 211, 454, 500 |
| TaqI | TCGA | 2 cut(s) | 29, 345 |
| TasI | AATT | 6 cut(s) | 259, 392, 438, 553, 600, 614 |
| Tru1I | TTAA | 2 cut(s) | 63, 515 |
| Tru9I | TTAA | 2 cut(s) | 63, 515 |
| TscAI | CASTG | 3 cut(s) | 214, 459, 721 |
| TseFI | GTSAC | 1 cut(s) | 49 |
| TseI | GCWGC | 2 cut(s) | 329, 413 |
| Tsp45I | GTSAC | 1 cut(s) | 49 |
| TspDTI | ATGAA | 4 cut(s) | 17, 501, 627, 636 |
| TspRI | CASTG | 3 cut(s) | 214, 459, 721 |
| VpaK11BI | GGWCC | 1 cut(s) | 725 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 179 |
| XapI | RAATTY | 1 cut(s) | 614 |
| XmiI | GTMKAC | 1 cut(s) | 169 |
| XspI | CTAG | 3 cut(s) | 423, 635, 657 |