Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 21 - 77 | 3.1e-14 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 124 |
| AciI | CCGC | 1 cut(s) | 163 |
| AclWI | GGATC | 1 cut(s) | 150 |
| AcsI | RAATTY | 3 cut(s) | 9, 31, 228 |
| AfaI | GTAC | 1 cut(s) | 200 |
| AflIII | ACRYGT | 1 cut(s) | 50 |
| AgsI | TTSAA | 4 cut(s) | 17, 29, 84, 248 |
| AluBI | AGCT | 1 cut(s) | 216 |
| AluI | AGCT | 1 cut(s) | 216 |
| AlwI | GGATC | 1 cut(s) | 150 |
| ApoI | RAATTY | 3 cut(s) | 9, 31, 228 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 104 |
| AsuII | TTCGAA | 1 cut(s) | 7 |
| BccI | CCATC | 1 cut(s) | 166 |
| BmcAI | AGTACT | 1 cut(s) | 200 |
| Bpu14I | TTCGAA | 1 cut(s) | 7 |
| Bse1I | ACTGG | 1 cut(s) | 206 |
| BseGI | GGATG | 2 cut(s) | 171, 177 |
| BseNI | ACTGG | 1 cut(s) | 206 |
| Bsp119I | TTCGAA | 1 cut(s) | 7 |
| Bsp143I | GATC | 1 cut(s) | 142 |
| BspACI | CCGC | 1 cut(s) | 163 |
| BspHI | TCATGA | 1 cut(s) | 156 |
| BspPI | GGATC | 1 cut(s) | 150 |
| BspT104I | TTCGAA | 1 cut(s) | 7 |
| BsrI | ACTGG | 1 cut(s) | 206 |
| BssMI | GATC | 1 cut(s) | 142 |
| BssNAI | GTATAC | 1 cut(s) | 125 |
| Bst1107I | GTATAC | 1 cut(s) | 125 |
| BstBI | TTCGAA | 1 cut(s) | 7 |
| BstF5I | GGATG | 2 cut(s) | 171, 177 |
| BstKTI | GATC | 1 cut(s) | 145 |
| BstMBI | GATC | 1 cut(s) | 142 |
| BstZ17I | GTATAC | 1 cut(s) | 125 |
| BtsCI | GGATG | 2 cut(s) | 171, 177 |
| CciI | TCATGA | 1 cut(s) | 156 |
| Csp6I | GTAC | 1 cut(s) | 199 |
| CviAII | CATG | 2 cut(s) | 136, 157 |
| CviJI | RGCY | 2 cut(s) | 134, 216 |
| CviKI_1 | RGCY | 2 cut(s) | 134, 216 |
| CviQI | GTAC | 1 cut(s) | 199 |
| DpnI | GATC | 1 cut(s) | 144 |
| DpnII | GATC | 1 cut(s) | 142 |
| EciI | GGCGGA | 1 cut(s) | 178 |
| EcoRI | GAATTC | 1 cut(s) | 228 |
| EcoT22I | ATGCAT | 1 cut(s) | 286 |
| FaeI | CATG | 2 cut(s) | 139, 160 |
| FaiI | YATR | 8 cut(s) | 47, 120, 125, 137, 158, 213, 241, 286 |
| FatI | CATG | 2 cut(s) | 135, 156 |
| FblI | GTMKAC | 1 cut(s) | 124 |
| FokI | GGATG | 2 cut(s) | 178, 184 |
| Hin1II | CATG | 2 cut(s) | 139, 160 |
| HinfI | GANTC | 2 cut(s) | 181, 220 |
| Hpy166II | GTNNAC | 1 cut(s) | 125 |
| Hpy188I | TCNGA | 2 cut(s) | 99, 208 |
| Hpy188III | TCNNGA | 3 cut(s) | 63, 146, 157 |
| Hpy8I | GTNNAC | 1 cut(s) | 125 |
| HpyCH4IV | ACGT | 1 cut(s) | 50 |
| HpyCH4V | TGCA | 1 cut(s) | 284 |
| HpySE526I | ACGT | 1 cut(s) | 50 |
| Hsp92II | CATG | 2 cut(s) | 139, 160 |
| Kzo9I | GATC | 1 cut(s) | 142 |
| LpnPI | CCDG | 3 cut(s) | 48, 113, 187 |
| MaeII | ACGT | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 41 |
| MalI | GATC | 1 cut(s) | 144 |
| MboI | GATC | 1 cut(s) | 142 |
| MluCI | AATT | 3 cut(s) | 9, 31, 228 |
| MnlI | CCTC | 4 cut(s) | 132, 153, 162, 256 |
| Mph1103I | ATGCAT | 1 cut(s) | 286 |
| MroXI | GAANNNNTTC | 1 cut(s) | 104 |
| NdeII | GATC | 1 cut(s) | 142 |
| NlaIII | CATG | 2 cut(s) | 139, 160 |
| NmuCI | GTSAC | 1 cut(s) | 41 |
| NsiI | ATGCAT | 1 cut(s) | 286 |
| NspV | TTCGAA | 1 cut(s) | 7 |
| PagI | TCATGA | 1 cut(s) | 156 |
| PdmI | GAANNNNTTC | 1 cut(s) | 104 |
| PfeI | GAWTC | 2 cut(s) | 181, 220 |
| RsaI | GTAC | 1 cut(s) | 200 |
| RsaNI | GTAC | 1 cut(s) | 199 |
| Sau3AI | GATC | 1 cut(s) | 142 |
| ScaI | AGTACT | 1 cut(s) | 200 |
| SetI | ASST | 2 cut(s) | 53, 218 |
| SfuI | TTCGAA | 1 cut(s) | 7 |
| Sse9I | AATT | 3 cut(s) | 9, 31, 228 |
| SsiI | CCGC | 1 cut(s) | 163 |
| TaiI | ACGT | 1 cut(s) | 53 |
| TaqI | TCGA | 1 cut(s) | 7 |
| TasI | AATT | 3 cut(s) | 9, 31, 228 |
| TatI | WGTACW | 1 cut(s) | 198 |
| TfiI | GAWTC | 2 cut(s) | 181, 220 |
| TseFI | GTSAC | 1 cut(s) | 41 |
| Tsp45I | GTSAC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 3 cut(s) | 97, 145, 194 |
| XapI | RAATTY | 3 cut(s) | 9, 31, 228 |
| XmiI | GTMKAC | 1 cut(s) | 124 |
| XmnI | GAANNNNTTC | 1 cut(s) | 104 |
| ZrmI | AGTACT | 1 cut(s) | 200 |
| Zsp2I | ATGCAT | 1 cut(s) | 286 |