Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 2 - 66 | 2.2e-18 | hAT family C-terminal dimerisation region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 49, 257 |
| AcuI | CTGAAG | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 152 |
| AluBI | AGCT | 2 cut(s) | 104, 147 |
| AluI | AGCT | 2 cut(s) | 104, 147 |
| Alw21I | GWGCWC | 2 cut(s) | 149, 185 |
| AoxI | GGCC | 2 cut(s) | 171, 382 |
| ApeKI | GCWGC | 2 cut(s) | 4, 104 |
| AseI | ATTAAT | 1 cut(s) | 245 |
| BanII | GRGCYC | 2 cut(s) | 149, 206 |
| BbsI | GAAGAC | 1 cut(s) | 124 |
| Bbv12I | GWGCWC | 2 cut(s) | 149, 185 |
| BbvI | GCAGC | 1 cut(s) | 91 |
| BccI | CCATC | 1 cut(s) | 217 |
| BglII | AGATCT | 1 cut(s) | 400 |
| BisI | GCNGC | 2 cut(s) | 5, 105 |
| BlsI | GCNGC | 2 cut(s) | 6, 106 |
| BmiI | GGNNCC | 1 cut(s) | 203 |
| BmsI | GCATC | 2 cut(s) | 89, 302 |
| BpiI | GAAGAC | 1 cut(s) | 124 |
| BpmI | CTGGAG | 1 cut(s) | 163 |
| BsaJI | CCNNGG | 1 cut(s) | 408 |
| Bse1I | ACTGG | 2 cut(s) | 93, 146 |
| BseDI | CCNNGG | 1 cut(s) | 408 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseMII | CTCAG | 2 cut(s) | 323, 384 |
| BseNI | ACTGG | 2 cut(s) | 93, 146 |
| BseXI | GCAGC | 1 cut(s) | 91 |
| BseYI | CCCAGC | 1 cut(s) | 76 |
| BsgI | GTGCAG | 1 cut(s) | 188 |
| Bsh1236I | CGCG | 2 cut(s) | 49, 257 |
| BshFI | GGCC | 2 cut(s) | 173, 384 |
| BsiHKAI | GWGCWC | 2 cut(s) | 149, 185 |
| BsnI | GGCC | 2 cut(s) | 173, 384 |
| Bsp1286I | GDGCHC | 3 cut(s) | 149, 185, 206 |
| Bsp143I | GATC | 1 cut(s) | 400 |
| Bsp68I | TCGCGA | 1 cut(s) | 49 |
| BspANI | GGCC | 2 cut(s) | 173, 384 |
| BspCNI | CTCAG | 2 cut(s) | 322, 383 |
| BspFNI | CGCG | 2 cut(s) | 49, 257 |
| BspLI | GGNNCC | 1 cut(s) | 203 |
| BsrI | ACTGG | 2 cut(s) | 93, 146 |
| BssECI | CCNNGG | 1 cut(s) | 408 |
| BssMI | GATC | 1 cut(s) | 400 |
| Bst4CI | ACNGT | 2 cut(s) | 123, 220 |
| BstC8I | GCNNGC | 1 cut(s) | 171 |
| BstDEI | CTNAG | 2 cut(s) | 309, 370 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstFNI | CGCG | 2 cut(s) | 49, 257 |
| BstKTI | GATC | 1 cut(s) | 403 |
| BstMBI | GATC | 1 cut(s) | 400 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 77 |
| BstUI | CGCG | 2 cut(s) | 49, 257 |
| BstV1I | GCAGC | 1 cut(s) | 91 |
| BstV2I | GAAGAC | 1 cut(s) | 124 |
| BstX2I | RGATCY | 1 cut(s) | 400 |
| BstYI | RGATCY | 1 cut(s) | 400 |
| BsuRI | GGCC | 2 cut(s) | 173, 384 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsIMutI | CAGTG | 2 cut(s) | 86, 139 |
| BtuMI | TCGCGA | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 1 cut(s) | 171 |
| CseI | GACGC | 1 cut(s) | 263 |
| Csp6I | GTAC | 1 cut(s) | 151 |
| CviAII | CATG | 1 cut(s) | 334 |
| CviJI | RGCY | 9 cut(s) | 92, 104, 147, 173, 196, 204, 313, 369, 384 |
| CviKI_1 | RGCY | 9 cut(s) | 92, 104, 147, 173, 196, 204, 313, 369, 384 |
| CviQI | GTAC | 1 cut(s) | 151 |
| DdeI | CTNAG | 2 cut(s) | 309, 370 |
| DpnI | GATC | 1 cut(s) | 402 |
| DpnII | GATC | 1 cut(s) | 400 |
| Ecl136II | GAGCTC | 1 cut(s) | 147 |
| Eco147I | AGGCCT | 2 cut(s) | 173, 384 |
| Eco24I | GRGCYC | 2 cut(s) | 149, 206 |
| Eco53kI | GAGCTC | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 1 cut(s) | 120 |
| EcoICRI | GAGCTC | 1 cut(s) | 147 |
| EcoT22I | ATGCAT | 1 cut(s) | 295 |
| EcoT38I | GRGCYC | 2 cut(s) | 149, 206 |
| FaeI | CATG | 1 cut(s) | 337 |
| FaiI | YATR | 3 cut(s) | 291, 317, 335 |
| FatI | CATG | 1 cut(s) | 333 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 105 |
| FokI | GGATG | 1 cut(s) | 74 |
| FriOI | GRGCYC | 2 cut(s) | 149, 206 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 105 |
| GluI | GCNGC | 2 cut(s) | 5, 105 |
| GsaI | CCCAGC | 1 cut(s) | 80 |
| GsuI | CTGGAG | 1 cut(s) | 163 |
| HaeIII | GGCC | 2 cut(s) | 173, 384 |
| HgaI | GACGC | 1 cut(s) | 263 |
| Hin1II | CATG | 1 cut(s) | 337 |
| HinfI | GANTC | 1 cut(s) | 278 |
| Hpy166II | GTNNAC | 2 cut(s) | 22, 153 |
| Hpy188I | TCNGA | 6 cut(s) | 100, 283, 340, 373, 391, 409 |
| Hpy188III | TCNNGA | 1 cut(s) | 48 |
| Hpy8I | GTNNAC | 2 cut(s) | 22, 153 |
| HpyAV | CCTTC | 3 cut(s) | 341, 359, 374 |
| HpyCH4III | ACNGT | 2 cut(s) | 123, 220 |
| HpyCH4V | TGCA | 5 cut(s) | 7, 56, 107, 169, 293 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 77 |
| HpyF3I | CTNAG | 2 cut(s) | 309, 370 |
| Hsp92II | CATG | 1 cut(s) | 337 |
| Kzo9I | GATC | 1 cut(s) | 400 |
| LmnI | GCTCC | 2 cut(s) | 144, 201 |
| LpnPI | CCDG | 5 cut(s) | 74, 90, 127, 155, 398 |
| Lsp1109I | GCAGC | 1 cut(s) | 91 |
| LweI | GCATC | 2 cut(s) | 89, 302 |
| MalI | GATC | 1 cut(s) | 402 |
| MboI | GATC | 1 cut(s) | 400 |
| MboII | GAAGA | 3 cut(s) | 129, 204, 410 |
| MflI | RGATCY | 1 cut(s) | 400 |
| MhlI | GDGCHC | 3 cut(s) | 149, 185, 206 |
| MluCI | AATT | 3 cut(s) | 51, 190, 246 |
| MlyI | GAGTC | 1 cut(s) | 287 |
| MnlI | CCTC | 2 cut(s) | 244, 403 |
| Mph1103I | ATGCAT | 1 cut(s) | 295 |
| MseI | TTAA | 1 cut(s) | 245 |
| MvnI | CGCG | 2 cut(s) | 49, 257 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 77 |
| NdeII | GATC | 1 cut(s) | 400 |
| NlaIII | CATG | 1 cut(s) | 337 |
| NlaIV | GGNNCC | 1 cut(s) | 203 |
| NruI | TCGCGA | 1 cut(s) | 49 |
| NsiI | ATGCAT | 1 cut(s) | 295 |
| PceI | AGGCCT | 2 cut(s) | 173, 384 |
| PkrI | GCNGC | 2 cut(s) | 6, 106 |
| PleI | GAGTC | 1 cut(s) | 286 |
| PpsI | GAGTC | 1 cut(s) | 286 |
| PshBI | ATTAAT | 1 cut(s) | 245 |
| Psp124BI | GAGCTC | 1 cut(s) | 149 |
| PspFI | CCCAGC | 1 cut(s) | 76 |
| PspN4I | GGNNCC | 1 cut(s) | 203 |
| PsuI | RGATCY | 1 cut(s) | 400 |
| RruI | TCGCGA | 1 cut(s) | 49 |
| RsaI | GTAC | 1 cut(s) | 152 |
| RsaNI | GTAC | 1 cut(s) | 151 |
| SacI | GAGCTC | 1 cut(s) | 149 |
| SaqAI | TTAA | 1 cut(s) | 245 |
| SatI | GCNGC | 2 cut(s) | 5, 105 |
| Sau3AI | GATC | 1 cut(s) | 400 |
| SchI | GAGTC | 1 cut(s) | 287 |
| SduI | GDGCHC | 3 cut(s) | 149, 185, 206 |
| SetI | ASST | 3 cut(s) | 106, 149, 352 |
| SfaNI | GCATC | 2 cut(s) | 89, 302 |
| Sse9I | AATT | 3 cut(s) | 51, 190, 246 |
| SseBI | AGGCCT | 2 cut(s) | 173, 384 |
| SstI | GAGCTC | 1 cut(s) | 149 |
| StuI | AGGCCT | 2 cut(s) | 173, 384 |
| TaaI | ACNGT | 2 cut(s) | 123, 220 |
| TaqI | TCGA | 1 cut(s) | 276 |
| TasI | AATT | 3 cut(s) | 51, 190, 246 |
| Tru1I | TTAA | 1 cut(s) | 245 |
| Tru9I | TTAA | 1 cut(s) | 245 |
| TscAI | CASTG | 2 cut(s) | 93, 146 |
| TseI | GCWGC | 2 cut(s) | 4, 104 |
| TspDTI | ATGAA | 2 cut(s) | 84, 252 |
| TspGWI | ACGGA | 1 cut(s) | 214 |
| TspRI | CASTG | 2 cut(s) | 93, 146 |
| VspI | ATTAAT | 1 cut(s) | 245 |
| Zsp2I | ATGCAT | 1 cut(s) | 295 |