BED zinc finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1717 |
| Acc36I | ACCTGC | 2 cut(s) | 911, 968 |
| Acc65I | GGTACC | 1 cut(s) | 923 |
| AccB1I | GGYRCC | 2 cut(s) | 184, 923 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2673 |
| AccBSI | CCGCTC | 2 cut(s) | 524, 644 |
| AccI | GTMKAC | 1 cut(s) | 569 |
| AccII | CGCG | 1 cut(s) | 2699 |
| AccIII | TCCGGA | 1 cut(s) | 1432 |
| AcoI | YGGCCR | 4 cut(s) | 471, 495, 519, 1962 |
| AcsI | RAATTY | 3 cut(s) | 1549, 2202, 2250 |
| AcuI | CTGAAG | 3 cut(s) | 264, 456, 480 |
| AcyI | GRCGYC | 1 cut(s) | 185 |
| AfaI | GTAC | 6 cut(s) | 904, 925, 1627, 2396, 2519, 2621 |
| AfeI | AGCGCT | 1 cut(s) | 969 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 66, 181, 1153, 1318, 1903, 2137, 2673 |
| AflII | CTTAAG | 1 cut(s) | 1745 |
| AflIII | ACRYGT | 5 cut(s) | 1303, 1323, 2391, 2484, 2697 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2551 |
| AjiI | CACGTC | 2 cut(s) | 1304, 2485 |
| AjnI | CCWGG | 4 cut(s) | 850, 1165, 1297, 2130 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 54, 86 |
| Alw21I | GWGCWC | 2 cut(s) | 456, 2262 |
| Alw26I | GTCTC | 8 cut(s) | 242, 386, 1529, 1919, 2399, 2460, 2538, 2636 |
| Alw44I | GTGCAC | 1 cut(s) | 452 |
| Ama87I | CYCGRG | 3 cut(s) | 45, 2466, 2541 |
| Aor13HI | TCCGGA | 1 cut(s) | 1432 |
| Aor51HI | AGCGCT | 1 cut(s) | 969 |
| ApaLI | GTGCAC | 1 cut(s) | 452 |
| ApoI | RAATTY | 3 cut(s) | 1549, 2202, 2250 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2269, 2301, 2573, 2605 |
| AseI | ATTAAT | 1 cut(s) | 651 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1734 |
| Asp718I | GGTACC | 1 cut(s) | 923 |
| AspLEI | GCGC | 4 cut(s) | 187, 798, 970, 1450 |
| AspS9I | GGNCC | 8 cut(s) | 31, 128, 327, 427, 663, 848, 957, 1621 |
| AsuC2I | CCSGG | 1 cut(s) | 1688 |
| AsuHPI | GGTGA | 3 cut(s) | 823, 1225, 1267 |
| AvaI | CYCGRG | 3 cut(s) | 45, 2466, 2541 |
| AvaII | GGWCC | 4 cut(s) | 31, 327, 848, 957 |
| BaeGI | GKGCMC | 2 cut(s) | 456, 1371 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2586, 2619 |
| BamHI | GGATCC | 2 cut(s) | 2062, 2158 |
| BanI | GGYRCC | 2 cut(s) | 184, 923 |
| BanII | GRGCYC | 2 cut(s) | 308, 2262 |
| BbsI | GAAGAC | 4 cut(s) | 684, 990, 1715, 1914 |
| Bbv12I | GWGCWC | 2 cut(s) | 456, 2262 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 433, 467 |
| BciT130I | CCWGG | 4 cut(s) | 852, 1167, 1299, 2132 |
| BciVI | GTATCC | 1 cut(s) | 1861 |
| BclI | TGATCA | 1 cut(s) | 1125 |
| BcnI | CCSGG | 1 cut(s) | 1688 |
| BcoDI | GTCTC | 8 cut(s) | 242, 386, 1529, 1919, 2399, 2460, 2538, 2636 |
| BfaI | CTAG | 3 cut(s) | 27, 66, 95 |
| BfmI | CTRYAG | 2 cut(s) | 1995, 2568 |
| BfoI | RGCGCY | 2 cut(s) | 188, 971 |
| BfrI | CTTAAG | 1 cut(s) | 1745 |
| BfuAI | ACCTGC | 2 cut(s) | 911, 968 |
| BfuI | GTATCC | 1 cut(s) | 1861 |
| BglII | AGATCT | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 5 cut(s) | 852, 1167, 1299, 1688, 2132 |
| Bme18I | GGWCC | 4 cut(s) | 31, 327, 848, 957 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2551 |
| BmeT110I | CYCGRG | 3 cut(s) | 45, 2466, 2541 |
| BmgBI | CACGTC | 2 cut(s) | 1304, 2485 |
| BmgT120I | GGNCC | 8 cut(s) | 31, 128, 327, 427, 663, 848, 957, 1621 |
| BmrFI | CCNGG | 5 cut(s) | 852, 1167, 1299, 1688, 2132 |
| BmrI | ACTGGG | 1 cut(s) | 1374 |
| BmsI | GCATC | 5 cut(s) | 699, 1171, 1369, 1948, 2667 |
| BmuI | ACTGGG | 1 cut(s) | 1374 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1101 |
| BpiI | GAAGAC | 4 cut(s) | 684, 990, 1715, 1914 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1321, 1353 |
| BpmI | CTGGAG | 1 cut(s) | 1760 |
| BpuMI | CCSGG | 1 cut(s) | 1688 |
| Bsa29I | ATCGAT | 1 cut(s) | 168 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1127 |
| BsaHI | GRCGYC | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 7 cut(s) | 131, 219, 323, 1166, 2347, 2598, 2667 |
| BsaWI | WCCGGW | 3 cut(s) | 1059, 1432, 2560 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 730, 760, 1227, 1257 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 66, 181, 1153, 1318, 1903, 2137, 2673 |
| Bse1I | ACTGG | 6 cut(s) | 34, 1369, 1391, 1916, 2120, 2678 |
| Bse3DI | GCAATG | 3 cut(s) | 945, 1612, 1638 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1127 |
| BseAI | TCCGGA | 1 cut(s) | 1432 |
| BseBI | CCWGG | 4 cut(s) | 852, 1167, 1299, 2132 |
| BseCI | ATCGAT | 1 cut(s) | 168 |
| BseDI | CCNNGG | 7 cut(s) | 131, 219, 323, 1166, 2347, 2598, 2667 |
| BseGI | GGATG | 7 cut(s) | 374, 860, 1128, 1162, 1968, 2455, 2682 |
| BseJI | GATNNNNATC | 1 cut(s) | 1127 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 66, 181, 1153, 1318, 1903, 2137, 2673 |
| BseMI | GCAATG | 3 cut(s) | 945, 1612, 1638 |
| BseMII | CTCAG | 2 cut(s) | 1352, 1520 |
| BseNI | ACTGG | 6 cut(s) | 34, 1369, 1391, 1916, 2120, 2678 |
| BseRI | GAGGAG | 1 cut(s) | 167 |
| BseSI | GKGCMC | 2 cut(s) | 456, 1371 |
| BseYI | CCCAGC | 5 cut(s) | 358, 382, 406, 964, 1012 |
| BsgI | GTGCAG | 1 cut(s) | 1918 |
| Bsh1236I | CGCG | 1 cut(s) | 2699 |
| Bsh1285I | CGRYCG | 1 cut(s) | 172 |
| BshNI | GGYRCC | 2 cut(s) | 184, 923 |
| BshVI | ATCGAT | 1 cut(s) | 168 |
| BsiEI | CGRYCG | 1 cut(s) | 172 |
| BsiHKAI | GWGCWC | 2 cut(s) | 456, 2262 |
| BsiHKCI | CYCGRG | 3 cut(s) | 45, 2466, 2541 |
| BsiSI | CCGG | 5 cut(s) | 111, 1060, 1433, 1687, 2561 |
| BslFI | GGGAC | 3 cut(s) | 970, 1705, 1748 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 66, 181, 1153, 1318, 1903, 2137, 2673 |
| BsmAI | GTCTC | 8 cut(s) | 242, 386, 1529, 1919, 2399, 2460, 2538, 2636 |
| BsmBI | CGTCTC | 2 cut(s) | 386, 2636 |
| BsmFI | GGGAC | 3 cut(s) | 970, 1705, 1748 |
| BsoBI | CYCGRG | 3 cut(s) | 45, 2466, 2541 |
| Bsp1286I | GDGCHC | 4 cut(s) | 308, 456, 1371, 2262 |
| Bsp13I | TCCGGA | 1 cut(s) | 1432 |
| Bsp1407I | TGTACA | 1 cut(s) | 2394 |
| Bsp19I | CCATGG | 1 cut(s) | 323 |
| BspCNI | CTCAG | 2 cut(s) | 1351, 1521 |
| BspDI | ATCGAT | 1 cut(s) | 168 |
| BspEI | TCCGGA | 1 cut(s) | 1432 |
| BspFNI | CGCG | 1 cut(s) | 2699 |
| BspHI | TCATGA | 3 cut(s) | 1477, 2254, 2266 |
| BspMAI | CTGCAG | 1 cut(s) | 1999 |
| BspMI | ACCTGC | 2 cut(s) | 911, 968 |
| BspT107I | GGYRCC | 2 cut(s) | 184, 923 |
| BspTI | CTTAAG | 1 cut(s) | 1745 |
| BsrBI | CCGCTC | 2 cut(s) | 524, 644 |
| BsrDI | GCAATG | 3 cut(s) | 945, 1612, 1638 |
| BsrGI | TGTACA | 1 cut(s) | 2394 |
| BsrI | ACTGG | 6 cut(s) | 34, 1369, 1391, 1916, 2120, 2678 |
| BssECI | CCNNGG | 7 cut(s) | 131, 219, 323, 1166, 2347, 2598, 2667 |
| BssNI | GRCGYC | 1 cut(s) | 185 |
| BssT1I | CCWWGG | 4 cut(s) | 219, 323, 2347, 2667 |
| Bst2UI | CCWGG | 4 cut(s) | 852, 1167, 1299, 2132 |
| Bst4CI | ACNGT | 7 cut(s) | 902, 1100, 1203, 1228, 2572, 2602, 2647 |
| BstACI | GRCGYC | 1 cut(s) | 185 |
| BstAFI | CTTAAG | 1 cut(s) | 1745 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 879 |
| BstAUI | TGTACA | 1 cut(s) | 2394 |
| BstC8I | GCNNGC | 4 cut(s) | 456, 868, 875, 884 |
| BstDEI | CTNAG | 5 cut(s) | 1338, 1451, 1529, 2043, 2085 |
| BstDSI | CCRYGG | 3 cut(s) | 131, 323, 2598 |
| BstF5I | GGATG | 7 cut(s) | 374, 860, 1128, 1162, 1968, 2455, 2682 |
| BstFNI | CGCG | 1 cut(s) | 2699 |
| BstH2I | RGCGCY | 2 cut(s) | 188, 971 |
| BstHHI | GCGC | 4 cut(s) | 187, 798, 970, 1450 |
| BstMAI | GTCTC | 8 cut(s) | 242, 386, 1529, 1919, 2399, 2460, 2538, 2636 |
| BstMCI | CGRYCG | 1 cut(s) | 172 |
| BstNI | CCWGG | 4 cut(s) | 852, 1167, 1299, 2132 |
| BstNSI | RCATGY | 3 cut(s) | 870, 1327, 2395 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1101 |
| BstSCI | CCNGG | 5 cut(s) | 850, 1165, 1297, 1686, 2130 |
| BstSFI | CTRYAG | 2 cut(s) | 1995, 2568 |
| BstSLI | GKGCMC | 2 cut(s) | 456, 1371 |
| BstUI | CGCG | 1 cut(s) | 2699 |
| BstV2I | GAAGAC | 4 cut(s) | 684, 990, 1715, 1914 |
| BstX2I | RGATCY | 4 cut(s) | 97, 607, 2062, 2158 |
| BstYI | RGATCY | 4 cut(s) | 97, 607, 2062, 2158 |
| Bsu15I | ATCGAT | 1 cut(s) | 168 |
| BsuI | GTATCC | 1 cut(s) | 1861 |
| BsuTUI | ATCGAT | 1 cut(s) | 168 |
| BtgI | CCRYGG | 3 cut(s) | 131, 323, 2598 |
| BtrI | CACGTC | 2 cut(s) | 1304, 2485 |
| BtsCI | GGATG | 7 cut(s) | 374, 860, 1128, 1162, 1968, 2455, 2682 |
| BtsI | GCAGTG | 1 cut(s) | 884 |
| BtsIMutI | CAGTG | 2 cut(s) | 884, 1526 |
| BveI | ACCTGC | 2 cut(s) | 911, 968 |
| Cac8I | GCNNGC | 4 cut(s) | 456, 868, 875, 884 |
| CciI | TCATGA | 3 cut(s) | 1477, 2254, 2266 |
| CfoI | GCGC | 4 cut(s) | 187, 798, 970, 1450 |
| Cfr13I | GGNCC | 8 cut(s) | 31, 128, 327, 427, 663, 848, 957, 1621 |
| ClaI | ATCGAT | 1 cut(s) | 168 |
| CseI | GACGC | 3 cut(s) | 2287, 2688, 2705 |
| Csp6I | GTAC | 6 cut(s) | 903, 924, 1626, 2395, 2518, 2620 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2692, 2727 |
| CviQI | GTAC | 6 cut(s) | 903, 924, 1626, 2395, 2518, 2620 |
| DdeI | CTNAG | 5 cut(s) | 1338, 1451, 1529, 2043, 2085 |
| DinI | GGCGCC | 1 cut(s) | 186 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1717 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2551 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1717 |
| EaeI | YGGCCR | 4 cut(s) | 471, 495, 519, 1962 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2551 |
| EciI | GGCGGA | 5 cut(s) | 135, 319, 367, 391, 2367 |
| Ecl136II | GAGCTC | 1 cut(s) | 2260 |
| Eco130I | CCWWGG | 4 cut(s) | 219, 323, 2347, 2667 |
| Eco147I | AGGCCT | 1 cut(s) | 1558 |
| Eco24I | GRGCYC | 2 cut(s) | 308, 2262 |
| Eco32I | GATATC | 3 cut(s) | 351, 399, 2230 |
| Eco47I | GGWCC | 4 cut(s) | 31, 327, 848, 957 |
| Eco47III | AGCGCT | 1 cut(s) | 969 |
| Eco53kI | GAGCTC | 1 cut(s) | 2260 |
| Eco57I | CTGAAG | 3 cut(s) | 264, 456, 480 |
| Eco88I | CYCGRG | 3 cut(s) | 45, 2466, 2541 |
| EcoICRI | GAGCTC | 1 cut(s) | 2260 |
| EcoO109I | RGGNCCY | 2 cut(s) | 848, 957 |
| EcoRI | GAATTC | 1 cut(s) | 2250 |
| EcoRII | CCWGG | 4 cut(s) | 850, 1165, 1297, 2130 |
| EcoRV | GATATC | 3 cut(s) | 351, 399, 2230 |
| EcoT14I | CCWWGG | 4 cut(s) | 219, 323, 2347, 2667 |
| EcoT22I | ATGCAT | 1 cut(s) | 1137 |
| EcoT38I | GRGCYC | 2 cut(s) | 308, 2262 |
| EgeI | GGCGCC | 1 cut(s) | 186 |
| EheI | GGCGCC | 1 cut(s) | 186 |
| ErhI | CCWWGG | 4 cut(s) | 219, 323, 2347, 2667 |
| Esp3I | CGTCTC | 2 cut(s) | 386, 2636 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 880, 912 |
| FaqI | GGGAC | 3 cut(s) | 970, 1705, 1748 |
| FauI | CCCGC | 1 cut(s) | 439 |
| FauNDI | CATATG | 2 cut(s) | 1152, 2660 |
| FbaI | TGATCA | 1 cut(s) | 1125 |
| FblI | GTMKAC | 1 cut(s) | 569 |
| FokI | GGATG | 7 cut(s) | 361, 867, 1135, 1149, 1955, 2462, 2689 |
| FriOI | GRGCYC | 2 cut(s) | 308, 2262 |
| FspBI | CTAG | 3 cut(s) | 27, 66, 95 |
| GlaI | GCGC | 4 cut(s) | 186, 797, 969, 1449 |
| GsaI | CCCAGC | 5 cut(s) | 362, 386, 410, 968, 1016 |
| GsuI | CTGGAG | 1 cut(s) | 1760 |
| HaeII | RGCGCY | 2 cut(s) | 188, 971 |
| HapII | CCGG | 5 cut(s) | 111, 1060, 1433, 1687, 2561 |
| HgaI | GACGC | 3 cut(s) | 2287, 2688, 2705 |
| HhaI | GCGC | 4 cut(s) | 187, 798, 970, 1450 |
| Hin1I | GRCGYC | 1 cut(s) | 185 |
| Hin6I | GCGC | 4 cut(s) | 185, 796, 968, 1448 |
| HinP1I | GCGC | 4 cut(s) | 185, 796, 968, 1448 |
| HincII | GTYRAC | 1 cut(s) | 1598 |
| HindII | GTYRAC | 1 cut(s) | 1598 |
| HindIII | AAGCTT | 1 cut(s) | 2177 |
| HpaII | CCGG | 5 cut(s) | 111, 1060, 1433, 1687, 2561 |
| HphI | GGTGA | 3 cut(s) | 823, 1225, 1267 |
| Hpy166II | GTNNAC | 4 cut(s) | 454, 570, 1598, 2703 |
| Hpy8I | GTNNAC | 4 cut(s) | 454, 570, 1598, 2703 |
| HpyAV | CCTTC | 5 cut(s) | 946, 1484, 2077, 2309, 2586 |
| HpyCH4III | ACNGT | 7 cut(s) | 902, 1100, 1203, 1228, 2572, 2602, 2647 |
| HpyCH4IV | ACGT | 3 cut(s) | 843, 1303, 2484 |
| HpyF3I | CTNAG | 5 cut(s) | 1338, 1451, 1529, 2043, 2085 |
| HpySE526I | ACGT | 3 cut(s) | 843, 1303, 2484 |
| Hsp92I | GRCGYC | 1 cut(s) | 185 |
| HspAI | GCGC | 4 cut(s) | 185, 796, 968, 1448 |
| KasI | GGCGCC | 1 cut(s) | 184 |
| Kpn2I | TCCGGA | 1 cut(s) | 1432 |
| KpnI | GGTACC | 1 cut(s) | 927 |
| Ksp22I | TGATCA | 1 cut(s) | 1125 |
| LweI | GCATC | 5 cut(s) | 699, 1171, 1369, 1948, 2667 |
| MaeI | CTAG | 3 cut(s) | 27, 66, 95 |
| MaeII | ACGT | 3 cut(s) | 843, 1303, 2484 |
| MaeIII | GTNAC | 5 cut(s) | 977, 1055, 1273, 1510, 1999 |
| MbiI | CCGCTC | 2 cut(s) | 524, 644 |
| MfeI | CAATTG | 3 cut(s) | 252, 813, 1785 |
| MflI | RGATCY | 4 cut(s) | 97, 607, 2062, 2158 |
| MhlI | GDGCHC | 4 cut(s) | 308, 456, 1371, 2262 |
| MluI | ACGCGT | 1 cut(s) | 2697 |
| Mly113I | GGCGCC | 1 cut(s) | 185 |
| MlyI | GAGTC | 7 cut(s) | 125, 1430, 1727, 1759, 2370, 2462, 2576 |
| MmeI | TCCRAC | 2 cut(s) | 2409, 2604 |
| Mph1103I | ATGCAT | 1 cut(s) | 1137 |
| MroI | TCCGGA | 1 cut(s) | 1432 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1734 |
| MseI | TTAA | 7 cut(s) | 651, 1194, 1553, 1746, 1844, 2331, 2472 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1211 |
| MspA1I | CMGCKG | 2 cut(s) | 434, 2147 |
| MspCI | CTTAAG | 1 cut(s) | 1745 |
| MspI | CCGG | 5 cut(s) | 111, 1060, 1433, 1687, 2561 |
| MspR9I | CCNGG | 5 cut(s) | 852, 1167, 1299, 1688, 2132 |
| MunI | CAATTG | 3 cut(s) | 252, 813, 1785 |
| MvaI | CCWGG | 4 cut(s) | 852, 1167, 1299, 2132 |
| MvnI | CGCG | 1 cut(s) | 2699 |
| NarI | GGCGCC | 1 cut(s) | 185 |
| NciI | CCSGG | 1 cut(s) | 1688 |
| NcoI | CCATGG | 1 cut(s) | 323 |
| NdeI | CATATG | 2 cut(s) | 1152, 2660 |
| NmeAIII | GCCGAG | 2 cut(s) | 105, 161 |
| NmuCI | GTSAC | 2 cut(s) | 1273, 1510 |
| NsiI | ATGCAT | 1 cut(s) | 1137 |
| NspI | RCATGY | 3 cut(s) | 870, 1327, 2395 |
| PaeI | GCATGC | 1 cut(s) | 870 |
| PaeR7I | CTCGAG | 1 cut(s) | 2541 |
| PagI | TCATGA | 3 cut(s) | 1477, 2254, 2266 |
| PceI | AGGCCT | 1 cut(s) | 1558 |
| PciI | ACATGT | 2 cut(s) | 1323, 2391 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1734 |
| PfeI | GAWTC | 5 cut(s) | 1189, 1442, 2026, 2166, 2342 |
| PflFI | GACNNNGTC | 1 cut(s) | 2585 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2673 |
| PfoI | TCCNGGA | 2 cut(s) | 850, 1686 |
| Ple19I | CGATCG | 1 cut(s) | 172 |
| PleI | GAGTC | 7 cut(s) | 124, 1430, 1726, 1758, 2370, 2461, 2576 |
| PluTI | GGCGCC | 1 cut(s) | 188 |
| PpsI | GAGTC | 7 cut(s) | 124, 1430, 1726, 1758, 2370, 2461, 2576 |
| PpuMI | RGGWCCY | 2 cut(s) | 848, 957 |
| PscI | ACATGT | 2 cut(s) | 1323, 2391 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1101 |
| PshBI | ATTAAT | 1 cut(s) | 651 |
| Psp124BI | GAGCTC | 1 cut(s) | 2262 |
| Psp5II | RGGWCCY | 2 cut(s) | 848, 957 |
| Psp6I | CCWGG | 4 cut(s) | 850, 1165, 1297, 2130 |
| PspFI | CCCAGC | 5 cut(s) | 358, 382, 406, 964, 1012 |
| PspGI | CCWGG | 4 cut(s) | 850, 1165, 1297, 2130 |
| PspPI | GGNCC | 8 cut(s) | 31, 128, 327, 427, 663, 848, 957, 1621 |
| PspPPI | RGGWCCY | 2 cut(s) | 848, 957 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2556, 2588 |
| PstI | CTGCAG | 1 cut(s) | 1999 |
| PsuI | RGATCY | 4 cut(s) | 97, 607, 2062, 2158 |
| PsyI | GACNNNGTC | 1 cut(s) | 2585 |
| PvuI | CGATCG | 1 cut(s) | 172 |
| RsaI | GTAC | 6 cut(s) | 904, 925, 1627, 2396, 2519, 2621 |
| RsaNI | GTAC | 6 cut(s) | 903, 924, 1626, 2395, 2518, 2620 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1211 |
| SacI | GAGCTC | 1 cut(s) | 2262 |
| SaqAI | TTAA | 7 cut(s) | 651, 1194, 1553, 1746, 1844, 2331, 2472 |
| Sau96I | GGNCC | 8 cut(s) | 31, 128, 327, 427, 663, 848, 957, 1621 |
| SchI | GAGTC | 7 cut(s) | 125, 1430, 1727, 1759, 2370, 2462, 2576 |
| ScrFI | CCNGG | 5 cut(s) | 852, 1167, 1299, 1688, 2132 |
| SduI | GDGCHC | 4 cut(s) | 308, 456, 1371, 2262 |
| SfaNI | GCATC | 5 cut(s) | 699, 1171, 1369, 1948, 2667 |
| SfcI | CTRYAG | 2 cut(s) | 1995, 2568 |
| SfoI | GGCGCC | 1 cut(s) | 186 |
| Sfr274I | CTCGAG | 1 cut(s) | 2541 |
| SinI | GGWCC | 4 cut(s) | 31, 327, 848, 957 |
| SlaI | CTCGAG | 1 cut(s) | 2541 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1211 |
| SmlI | CTYRAG | 2 cut(s) | 1745, 2541 |
| SmoI | CTYRAG | 2 cut(s) | 1745, 2541 |
| SphI | GCATGC | 1 cut(s) | 870 |
| SseBI | AGGCCT | 1 cut(s) | 1558 |
| SspDI | GGCGCC | 1 cut(s) | 184 |
| SspI | AATATT | 1 cut(s) | 2726 |
| SspMI | CTAG | 3 cut(s) | 27, 66, 95 |
| SstI | GAGCTC | 1 cut(s) | 2262 |
| StuI | AGGCCT | 1 cut(s) | 1558 |
| StyD4I | CCNGG | 5 cut(s) | 850, 1165, 1297, 1686, 2130 |
| StyI | CCWWGG | 4 cut(s) | 219, 323, 2347, 2667 |
| TaaI | ACNGT | 7 cut(s) | 902, 1100, 1203, 1228, 2572, 2602, 2647 |
| TaiI | ACGT | 3 cut(s) | 846, 1306, 2487 |
| TaqI | TCGA | 5 cut(s) | 119, 168, 1956, 2052, 2542 |
| TatI | WGTACW | 2 cut(s) | 2394, 2619 |
| TauI | GCSGC | 6 cut(s) | 428, 476, 500, 524, 1405, 1964 |
| TfiI | GAWTC | 5 cut(s) | 1189, 1442, 2026, 2166, 2342 |
| Tru1I | TTAA | 7 cut(s) | 651, 1194, 1553, 1746, 1844, 2331, 2472 |
| Tru9I | TTAA | 7 cut(s) | 651, 1194, 1553, 1746, 1844, 2331, 2472 |
| TscAI | CASTG | 2 cut(s) | 884, 1533 |
| TseFI | GTSAC | 2 cut(s) | 1273, 1510 |
| Tsp45I | GTSAC | 2 cut(s) | 1273, 1510 |
| TspGWI | ACGGA | 4 cut(s) | 1274, 2262, 2388, 2575 |
| TspRI | CASTG | 2 cut(s) | 884, 1533 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2585 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2673 |
| Vha464I | CTTAAG | 1 cut(s) | 1745 |
| VneI | GTGCAC | 1 cut(s) | 452 |
| VpaK11BI | GGWCC | 4 cut(s) | 31, 327, 848, 957 |
| VspI | ATTAAT | 1 cut(s) | 651 |
| XapI | RAATTY | 3 cut(s) | 1549, 2202, 2250 |
| XceI | RCATGY | 3 cut(s) | 870, 1327, 2395 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 226, 841 |
| XhoI | CTCGAG | 1 cut(s) | 2541 |
| XmiI | GTMKAC | 1 cut(s) | 569 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1734 |
| XspI | CTAG | 3 cut(s) | 27, 66, 95 |
| Zsp2I | ATGCAT | 1 cut(s) | 1137 |