Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 525 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 872 |
| AccBSI | CCGCTC | 1 cut(s) | 678 |
| AccI | GTMKAC | 1 cut(s) | 829 |
| AccII | CGCG | 1 cut(s) | 684 |
| AccIII | TCCGGA | 1 cut(s) | 927 |
| AclWI | GGATC | 3 cut(s) | 688, 773, 786 |
| AcoI | YGGCCR | 1 cut(s) | 302 |
| AcsI | RAATTY | 3 cut(s) | 350, 536, 944 |
| AcuI | CTGAAG | 2 cut(s) | 267, 915 |
| AcyI | GRCGYC | 1 cut(s) | 526 |
| AfaI | GTAC | 4 cut(s) | 244, 285, 1061, 1120 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 638, 857, 872 |
| AgsI | TTSAA | 1 cut(s) | 476 |
| AjiI | CACGTC | 1 cut(s) | 833 |
| AleI | CACNNNNGTG | 1 cut(s) | 734 |
| AluBI | AGCT | 2 cut(s) | 300, 616 |
| AluI | AGCT | 2 cut(s) | 300, 616 |
| Alw21I | GWGCWC | 2 cut(s) | 192, 966 |
| Alw26I | GTCTC | 6 cut(s) | 142, 200, 334, 602, 741, 925 |
| Alw44I | GTGCAC | 1 cut(s) | 962 |
| AlwI | GGATC | 3 cut(s) | 688, 773, 786 |
| Aor13HI | TCCGGA | 1 cut(s) | 927 |
| AoxI | GGCC | 3 cut(s) | 302, 384, 417 |
| ApaLI | GTGCAC | 1 cut(s) | 962 |
| ApoI | RAATTY | 3 cut(s) | 350, 536, 944 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 513, 516, 540 |
| AspLEI | GCGC | 1 cut(s) | 528 |
| AspS9I | GGNCC | 3 cut(s) | 418, 726, 1005 |
| AsuHPI | GGTGA | 7 cut(s) | 98, 157, 266, 665, 680, 964, 1109 |
| AvaII | GGWCC | 2 cut(s) | 726, 1005 |
| BaeGI | GKGCMC | 1 cut(s) | 966 |
| BamHI | GGATCC | 1 cut(s) | 778 |
| BanI | GGYRCC | 1 cut(s) | 525 |
| BauI | CACGAG | 1 cut(s) | 965 |
| Bbv12I | GWGCWC | 2 cut(s) | 192, 966 |
| BccI | CCATC | 4 cut(s) | 77, 245, 641, 866 |
| BceAI | ACGGC | 1 cut(s) | 18 |
| BclI | TGATCA | 1 cut(s) | 1110 |
| BcoDI | GTCTC | 6 cut(s) | 142, 200, 334, 602, 741, 925 |
| BfaI | CTAG | 1 cut(s) | 480 |
| BfmI | CTRYAG | 1 cut(s) | 20 |
| BfoI | RGCGCY | 1 cut(s) | 529 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 578 |
| BisI | GCNGC | 3 cut(s) | 305, 372, 417 |
| BlpI | GCTNAGC | 1 cut(s) | 296 |
| BlsI | GCNGC | 3 cut(s) | 306, 373, 418 |
| Bme18I | GGWCC | 2 cut(s) | 726, 1005 |
| BmgBI | CACGTC | 1 cut(s) | 833 |
| BmgT120I | GGNCC | 3 cut(s) | 418, 726, 1005 |
| BmiI | GGNNCC | 3 cut(s) | 527, 643, 780 |
| BmsI | GCATC | 3 cut(s) | 166, 432, 909 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 959, 991 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 296 |
| BpuEI | CTTGAG | 2 cut(s) | 978, 1027 |
| BsaAI | YACGTR | 2 cut(s) | 283, 445 |
| BsaBI | GATNNNNATC | 1 cut(s) | 68 |
| BsaHI | GRCGYC | 1 cut(s) | 526 |
| BsaI | GGTCTC | 2 cut(s) | 334, 602 |
| BsaJI | CCNNGG | 4 cut(s) | 381, 521, 789, 1122 |
| BsaWI | WCCGGW | 1 cut(s) | 927 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 638, 857, 872 |
| Bse118I | RCCGGY | 2 cut(s) | 386, 731 |
| Bse1I | ACTGG | 2 cut(s) | 213, 851 |
| Bse8I | GATNNNNATC | 1 cut(s) | 68 |
| BseAI | TCCGGA | 1 cut(s) | 927 |
| BseDI | CCNNGG | 4 cut(s) | 381, 521, 789, 1122 |
| BseGI | GGATG | 1 cut(s) | 423 |
| BseJI | GATNNNNATC | 1 cut(s) | 68 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 638, 857, 872 |
| BseMII | CTCAG | 2 cut(s) | 597, 734 |
| BseNI | ACTGG | 2 cut(s) | 213, 851 |
| BseSI | GKGCMC | 1 cut(s) | 966 |
| BseYI | CCCAGC | 1 cut(s) | 117 |
| Bsh1236I | CGCG | 1 cut(s) | 684 |
| BshFI | GGCC | 3 cut(s) | 304, 386, 419 |
| BshNI | GGYRCC | 1 cut(s) | 525 |
| BsiHKAI | GWGCWC | 2 cut(s) | 192, 966 |
| BsiSI | CCGG | 4 cut(s) | 387, 732, 803, 928 |
| BslFI | GGGAC | 1 cut(s) | 873 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 638, 857, 872 |
| BsmAI | GTCTC | 6 cut(s) | 142, 200, 334, 602, 741, 925 |
| BsmFI | GGGAC | 1 cut(s) | 873 |
| BsnI | GGCC | 3 cut(s) | 304, 386, 419 |
| Bso31I | GGTCTC | 2 cut(s) | 334, 602 |
| Bsp1286I | GDGCHC | 2 cut(s) | 192, 966 |
| Bsp13I | TCCGGA | 1 cut(s) | 927 |
| Bsp143I | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 296 |
| Bsp19I | CCATGG | 1 cut(s) | 521 |
| Bsp68I | TCGCGA | 1 cut(s) | 684 |
| BspANI | GGCC | 3 cut(s) | 304, 386, 419 |
| BspCNI | CTCAG | 2 cut(s) | 598, 735 |
| BspEI | TCCGGA | 1 cut(s) | 927 |
| BspFNI | CGCG | 1 cut(s) | 684 |
| BspHI | TCATGA | 1 cut(s) | 700 |
| BspLI | GGNNCC | 3 cut(s) | 527, 643, 780 |
| BspPI | GGATC | 3 cut(s) | 688, 773, 786 |
| BspQI | GCTCTTC | 1 cut(s) | 180 |
| BspT107I | GGYRCC | 1 cut(s) | 525 |
| BspTNI | GGTCTC | 2 cut(s) | 334, 602 |
| BsrBI | CCGCTC | 1 cut(s) | 678 |
| BsrFI | RCCGGY | 2 cut(s) | 386, 731 |
| BsrI | ACTGG | 2 cut(s) | 213, 851 |
| BssAI | RCCGGY | 2 cut(s) | 386, 731 |
| BssECI | CCNNGG | 4 cut(s) | 381, 521, 789, 1122 |
| BssMI | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| BssNI | GRCGYC | 1 cut(s) | 526 |
| BssSI | CACGAG | 1 cut(s) | 965 |
| BssT1I | CCWWGG | 2 cut(s) | 381, 521 |
| Bst2BI | CACGAG | 1 cut(s) | 965 |
| Bst4CI | ACNGT | 5 cut(s) | 24, 194, 707, 1123, 1137 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstACI | GRCGYC | 1 cut(s) | 526 |
| BstBAI | YACGTR | 2 cut(s) | 283, 445 |
| BstC8I | GCNNGC | 6 cut(s) | 31, 302, 388, 421, 555, 597 |
| BstDEI | CTNAG | 3 cut(s) | 296, 606, 743 |
| BstDSI | CCRYGG | 3 cut(s) | 521, 789, 1122 |
| BstEII | GGTNACC | 1 cut(s) | 970 |
| BstF5I | GGATG | 1 cut(s) | 423 |
| BstFNI | CGCG | 1 cut(s) | 684 |
| BstH2I | RGCGCY | 1 cut(s) | 529 |
| BstHHI | GCGC | 1 cut(s) | 528 |
| BstKTI | GATC | 7 cut(s) | 15, 72, 394, 673, 696, 781, 1113 |
| BstMAI | GTCTC | 6 cut(s) | 142, 200, 334, 602, 741, 925 |
| BstMBI | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 301, 578 |
| BstNSI | RCATGY | 1 cut(s) | 33 |
| BstPI | GGTNACC | 1 cut(s) | 970 |
| BstSFI | CTRYAG | 1 cut(s) | 20 |
| BstSLI | GKGCMC | 1 cut(s) | 966 |
| BstUI | CGCG | 1 cut(s) | 684 |
| BstX2I | RGATCY | 2 cut(s) | 693, 778 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 736 |
| BstYI | RGATCY | 2 cut(s) | 693, 778 |
| BsuRI | GGCC | 3 cut(s) | 304, 386, 419 |
| BtgI | CCRYGG | 3 cut(s) | 521, 789, 1122 |
| BtrI | CACGTC | 1 cut(s) | 833 |
| BtsCI | GGATG | 1 cut(s) | 423 |
| BtsIMutI | CAGTG | 1 cut(s) | 891 |
| BtuMI | TCGCGA | 1 cut(s) | 684 |
| Cac8I | GCNNGC | 6 cut(s) | 31, 302, 388, 421, 555, 597 |
| CciI | TCATGA | 1 cut(s) | 700 |
| CfoI | GCGC | 1 cut(s) | 528 |
| Cfr10I | RCCGGY | 2 cut(s) | 386, 731 |
| Cfr13I | GGNCC | 3 cut(s) | 418, 726, 1005 |
| CseI | GACGC | 1 cut(s) | 1058 |
| Csp6I | GTAC | 4 cut(s) | 243, 284, 1060, 1119 |
| CviAII | CATG | 5 cut(s) | 30, 522, 646, 701, 935 |
| CviQI | GTAC | 4 cut(s) | 243, 284, 1060, 1119 |
| DdeI | CTNAG | 3 cut(s) | 296, 606, 743 |
| DinI | GGCGCC | 1 cut(s) | 527 |
| DpnI | GATC | 7 cut(s) | 14, 71, 393, 672, 695, 780, 1112 |
| DpnII | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| EaeI | YGGCCR | 1 cut(s) | 302 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| EciI | GGCGGA | 1 cut(s) | 534 |
| Eco130I | CCWWGG | 2 cut(s) | 381, 521 |
| Eco31I | GGTCTC | 2 cut(s) | 334, 602 |
| Eco47I | GGWCC | 2 cut(s) | 726, 1005 |
| Eco57I | CTGAAG | 2 cut(s) | 267, 915 |
| Eco91I | GGTNACC | 1 cut(s) | 970 |
| EcoO65I | GGTNACC | 1 cut(s) | 970 |
| EcoRI | GAATTC | 1 cut(s) | 350 |
| EcoT14I | CCWWGG | 2 cut(s) | 381, 521 |
| EgeI | GGCGCC | 1 cut(s) | 527 |
| EheI | GGCGCC | 1 cut(s) | 527 |
| ErhI | CCWWGG | 2 cut(s) | 381, 521 |
| FaeI | CATG | 5 cut(s) | 33, 525, 649, 704, 938 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 501, 533 |
| FaqI | GGGAC | 1 cut(s) | 873 |
| FatI | CATG | 5 cut(s) | 29, 521, 645, 700, 934 |
| FauI | CCCGC | 2 cut(s) | 428, 992 |
| FbaI | TGATCA | 1 cut(s) | 1110 |
| FblI | GTMKAC | 1 cut(s) | 829 |
| Fnu4HI | GCNGC | 3 cut(s) | 305, 372, 417 |
| FokI | GGATG | 1 cut(s) | 410 |
| Fsp4HI | GCNGC | 3 cut(s) | 305, 372, 417 |
| FspBI | CTAG | 1 cut(s) | 480 |
| GlaI | GCGC | 1 cut(s) | 527 |
| GluI | GCNGC | 3 cut(s) | 305, 372, 417 |
| GsaI | CCCAGC | 1 cut(s) | 121 |
| HaeII | RGCGCY | 1 cut(s) | 529 |
| HaeIII | GGCC | 3 cut(s) | 304, 386, 419 |
| HapII | CCGG | 4 cut(s) | 387, 732, 803, 928 |
| HgaI | GACGC | 1 cut(s) | 1058 |
| HhaI | GCGC | 1 cut(s) | 528 |
| Hin1I | GRCGYC | 1 cut(s) | 526 |
| Hin1II | CATG | 5 cut(s) | 33, 525, 649, 704, 938 |
| Hin6I | GCGC | 1 cut(s) | 526 |
| HinP1I | GCGC | 1 cut(s) | 526 |
| HincII | GTYRAC | 2 cut(s) | 205, 830 |
| HindII | GTYRAC | 2 cut(s) | 205, 830 |
| HindIII | AAGCTT | 1 cut(s) | 614 |
| HpaII | CCGG | 4 cut(s) | 387, 732, 803, 928 |
| HphI | GGTGA | 7 cut(s) | 98, 157, 266, 665, 680, 964, 1109 |
| Hpy166II | GTNNAC | 5 cut(s) | 205, 729, 830, 964, 1014 |
| Hpy188I | TCNGA | 3 cut(s) | 363, 463, 562 |
| Hpy188III | TCNNGA | 6 cut(s) | 182, 480, 683, 701, 928, 1080 |
| Hpy8I | GTNNAC | 5 cut(s) | 205, 729, 830, 964, 1014 |
| Hpy99I | CGWCG | 3 cut(s) | 203, 230, 834 |
| HpyAV | CCTTC | 2 cut(s) | 98, 707 |
| HpyCH4III | ACNGT | 5 cut(s) | 24, 194, 707, 1123, 1137 |
| HpyCH4IV | ACGT | 3 cut(s) | 282, 444, 832 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 157, 922, 964 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 301, 578 |
| HpyF3I | CTNAG | 3 cut(s) | 296, 606, 743 |
| HpySE526I | ACGT | 3 cut(s) | 282, 444, 832 |
| Hsp92I | GRCGYC | 1 cut(s) | 526 |
| Hsp92II | CATG | 5 cut(s) | 33, 525, 649, 704, 938 |
| HspAI | GCGC | 1 cut(s) | 526 |
| KasI | GGCGCC | 1 cut(s) | 525 |
| Kpn2I | TCCGGA | 1 cut(s) | 927 |
| KroI | GCCGGC | 1 cut(s) | 386 |
| KroNI | GCCGGC | 1 cut(s) | 388 |
| Ksp22I | TGATCA | 1 cut(s) | 1110 |
| Kzo9I | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| LguI | GCTCTTC | 1 cut(s) | 180 |
| LmnI | GCTCC | 3 cut(s) | 315, 647, 722 |
| LweI | GCATC | 3 cut(s) | 166, 432, 909 |
| MaeI | CTAG | 1 cut(s) | 480 |
| MaeII | ACGT | 3 cut(s) | 282, 444, 832 |
| MaeIII | GTNAC | 3 cut(s) | 970, 1046, 1097 |
| MalI | GATC | 7 cut(s) | 14, 71, 393, 672, 695, 780, 1112 |
| MbiI | CCGCTC | 1 cut(s) | 678 |
| MboI | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| MfeI | CAATTG | 2 cut(s) | 152, 721 |
| MflI | RGATCY | 2 cut(s) | 693, 778 |
| MhlI | GDGCHC | 2 cut(s) | 192, 966 |
| MluCI | AATT | 7 cut(s) | 152, 167, 350, 536, 656, 721, 944 |
| Mly113I | GGCGCC | 1 cut(s) | 526 |
| MlyI | GAGTC | 6 cut(s) | 330, 743, 780, 855, 985, 1034 |
| MmeI | TCCRAC | 1 cut(s) | 293 |
| MroI | TCCGGA | 1 cut(s) | 927 |
| MroNI | GCCGGC | 1 cut(s) | 386 |
| MroXI | GAANNNNTTC | 3 cut(s) | 513, 516, 540 |
| MseI | TTAA | 4 cut(s) | 51, 126, 218, 336 |
| MslI | CAYNNNNRTG | 3 cut(s) | 454, 705, 734 |
| MspI | CCGG | 4 cut(s) | 387, 732, 803, 928 |
| MunI | CAATTG | 2 cut(s) | 152, 721 |
| MvnI | CGCG | 1 cut(s) | 684 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 301, 578 |
| NaeI | GCCGGC | 1 cut(s) | 388 |
| NarI | GGCGCC | 1 cut(s) | 526 |
| NcoI | CCATGG | 1 cut(s) | 521 |
| NdeII | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| NgoMIV | GCCGGC | 1 cut(s) | 386 |
| NlaIII | CATG | 5 cut(s) | 33, 525, 649, 704, 938 |
| NlaIV | GGNNCC | 3 cut(s) | 527, 643, 780 |
| NmuCI | GTSAC | 3 cut(s) | 970, 1046, 1097 |
| NruI | TCGCGA | 1 cut(s) | 684 |
| NspI | RCATGY | 1 cut(s) | 33 |
| OliI | CACNNNNGTG | 1 cut(s) | 734 |
| PaeI | GCATGC | 1 cut(s) | 33 |
| PagI | TCATGA | 1 cut(s) | 700 |
| PciSI | GCTCTTC | 1 cut(s) | 180 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 204, 279 |
| PdiI | GCCGGC | 1 cut(s) | 388 |
| PdmI | GAANNNNTTC | 3 cut(s) | 513, 516, 540 |
| PfeI | GAWTC | 6 cut(s) | 55, 209, 464, 476, 876, 1083 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 872 |
| PkrI | GCNGC | 3 cut(s) | 306, 373, 418 |
| PleI | GAGTC | 6 cut(s) | 329, 743, 779, 855, 985, 1034 |
| PluTI | GGCGCC | 1 cut(s) | 529 |
| PpsI | GAGTC | 6 cut(s) | 329, 743, 779, 855, 985, 1034 |
| Ppu21I | YACGTR | 2 cut(s) | 283, 445 |
| PspEI | GGTNACC | 1 cut(s) | 970 |
| PspFI | CCCAGC | 1 cut(s) | 117 |
| PspN4I | GGNNCC | 3 cut(s) | 527, 643, 780 |
| PspPI | GGNCC | 3 cut(s) | 418, 726, 1005 |
| PsuI | RGATCY | 2 cut(s) | 693, 778 |
| RruI | TCGCGA | 1 cut(s) | 684 |
| RsaI | GTAC | 4 cut(s) | 244, 285, 1061, 1120 |
| RsaNI | GTAC | 4 cut(s) | 243, 284, 1060, 1119 |
| RseI | CAYNNNNRTG | 3 cut(s) | 454, 705, 734 |
| SalI | GTCGAC | 1 cut(s) | 828 |
| SapI | GCTCTTC | 1 cut(s) | 180 |
| SaqAI | TTAA | 4 cut(s) | 51, 126, 218, 336 |
| SatI | GCNGC | 3 cut(s) | 305, 372, 417 |
| Sau3AI | GATC | 7 cut(s) | 12, 69, 391, 670, 693, 778, 1110 |
| Sau96I | GGNCC | 3 cut(s) | 418, 726, 1005 |
| SchI | GAGTC | 6 cut(s) | 330, 743, 780, 855, 985, 1034 |
| SduI | GDGCHC | 2 cut(s) | 192, 966 |
| SfaNI | GCATC | 3 cut(s) | 166, 432, 909 |
| SfcI | CTRYAG | 1 cut(s) | 20 |
| SfoI | GGCGCC | 1 cut(s) | 527 |
| SgrAI | CRCCGGYG | 1 cut(s) | 731 |
| SinI | GGWCC | 2 cut(s) | 726, 1005 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 454, 705, 734 |
| SmlI | CTYRAG | 2 cut(s) | 993, 1042 |
| SmoI | CTYRAG | 2 cut(s) | 993, 1042 |
| SphI | GCATGC | 1 cut(s) | 33 |
| Sse9I | AATT | 7 cut(s) | 152, 167, 350, 536, 656, 721, 944 |
| SspDI | GGCGCC | 1 cut(s) | 525 |
| SspMI | CTAG | 1 cut(s) | 480 |
| StyI | CCWWGG | 2 cut(s) | 381, 521 |
| TaaI | ACNGT | 5 cut(s) | 24, 194, 707, 1123, 1137 |
| TaiI | ACGT | 3 cut(s) | 285, 447, 835 |
| TaqI | TCGA | 4 cut(s) | 72, 183, 829, 977 |
| TasI | AATT | 7 cut(s) | 152, 167, 350, 536, 656, 721, 944 |
| TauI | GCSGC | 3 cut(s) | 307, 374, 419 |
| TfiI | GAWTC | 6 cut(s) | 55, 209, 464, 476, 876, 1083 |
| Tru1I | TTAA | 4 cut(s) | 51, 126, 218, 336 |
| Tru9I | TTAA | 4 cut(s) | 51, 126, 218, 336 |
| TscAI | CASTG | 1 cut(s) | 898 |
| TseFI | GTSAC | 3 cut(s) | 970, 1046, 1097 |
| Tsp45I | GTSAC | 3 cut(s) | 970, 1046, 1097 |
| TspDTI | ATGAA | 4 cut(s) | 343, 689, 951, 989 |
| TspGWI | ACGGA | 2 cut(s) | 288, 806 |
| TspRI | CASTG | 1 cut(s) | 898 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 872 |
| VneI | GTGCAC | 1 cut(s) | 962 |
| VpaK11BI | GGWCC | 2 cut(s) | 726, 1005 |
| XapI | RAATTY | 3 cut(s) | 350, 536, 944 |
| XbaI | TCTAGA | 1 cut(s) | 479 |
| XceI | RCATGY | 1 cut(s) | 33 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 528 |
| XmiI | GTMKAC | 1 cut(s) | 829 |
| XmnI | GAANNNNTTC | 3 cut(s) | 513, 516, 540 |
| XspI | CTAG | 1 cut(s) | 480 |