Zinc finger BED domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 298, 305 |
| AcsI | RAATTY | 1 cut(s) | 245 |
| AgsI | TTSAA | 4 cut(s) | 40, 149, 280, 322 |
| AluBI | AGCT | 3 cut(s) | 24, 166, 325 |
| AluI | AGCT | 3 cut(s) | 24, 166, 325 |
| AlwI | GGATC | 2 cut(s) | 298, 305 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| ApoI | RAATTY | 1 cut(s) | 245 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 224, 256 |
| AspS9I | GGNCC | 1 cut(s) | 240 |
| AvaII | GGWCC | 1 cut(s) | 240 |
| AxyI | CCTNAGG | 1 cut(s) | 48 |
| BbvI | GCAGC | 1 cut(s) | 239 |
| BfaI | CTAG | 2 cut(s) | 99, 315 |
| BisI | GCNGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 1 cut(s) | 229 |
| Bme18I | GGWCC | 1 cut(s) | 240 |
| BmgT120I | GGNCC | 1 cut(s) | 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 326 |
| BsaBI | GATNNNNATC | 1 cut(s) | 279 |
| BsaWI | WCCGGW | 1 cut(s) | 13 |
| Bse21I | CCTNAGG | 1 cut(s) | 48 |
| Bse8I | GATNNNNATC | 1 cut(s) | 279 |
| BseGI | GGATG | 1 cut(s) | 306 |
| BseJI | GATNNNNATC | 1 cut(s) | 279 |
| BseMII | CTCAG | 3 cut(s) | 39, 144, 195 |
| BseXI | GCAGC | 1 cut(s) | 239 |
| BsiSI | CCGG | 1 cut(s) | 14 |
| Bsp143I | GATC | 2 cut(s) | 303, 310 |
| BspCNI | CTCAG | 3 cut(s) | 40, 145, 196 |
| BspHI | TCATGA | 1 cut(s) | 130 |
| BspPI | GGATC | 2 cut(s) | 298, 305 |
| BspQI | GCTCTTC | 1 cut(s) | 173 |
| BssMI | GATC | 2 cut(s) | 303, 310 |
| Bst6I | CTCTTC | 2 cut(s) | 48, 173 |
| BstDEI | CTNAG | 5 cut(s) | 48, 86, 153, 204, 326 |
| BstF5I | GGATG | 1 cut(s) | 306 |
| BstKTI | GATC | 2 cut(s) | 306, 313 |
| BstMBI | GATC | 2 cut(s) | 303, 310 |
| BstV1I | GCAGC | 1 cut(s) | 239 |
| Bsu36I | CCTNAGG | 1 cut(s) | 48 |
| BtsCI | GGATG | 1 cut(s) | 306 |
| BtsIMutI | CAGTG | 1 cut(s) | 201 |
| CciI | TCATGA | 1 cut(s) | 130 |
| Cfr13I | GGNCC | 1 cut(s) | 240 |
| CviAII | CATG | 1 cut(s) | 131 |
| CviJI | RGCY | 6 cut(s) | 24, 32, 46, 166, 267, 325 |
| CviKI_1 | RGCY | 6 cut(s) | 24, 32, 46, 166, 267, 325 |
| DdeI | CTNAG | 5 cut(s) | 48, 86, 153, 204, 326 |
| DpnI | GATC | 2 cut(s) | 305, 312 |
| DpnII | GATC | 2 cut(s) | 303, 310 |
| Eam1104I | CTCTTC | 2 cut(s) | 48, 173 |
| EarI | CTCTTC | 2 cut(s) | 48, 173 |
| Eco47I | GGWCC | 1 cut(s) | 240 |
| Eco81I | CCTNAGG | 1 cut(s) | 48 |
| FaeI | CATG | 1 cut(s) | 134 |
| FatI | CATG | 1 cut(s) | 130 |
| Fnu4HI | GCNGC | 1 cut(s) | 228 |
| FokI | GGATG | 1 cut(s) | 313 |
| Fsp4HI | GCNGC | 1 cut(s) | 228 |
| FspBI | CTAG | 2 cut(s) | 99, 315 |
| GluI | GCNGC | 1 cut(s) | 228 |
| HapII | CCGG | 1 cut(s) | 14 |
| Hin1II | CATG | 1 cut(s) | 134 |
| HincII | GTYRAC | 1 cut(s) | 348 |
| HindII | GTYRAC | 1 cut(s) | 348 |
| HinfI | GANTC | 2 cut(s) | 280, 318 |
| HpaII | CCGG | 1 cut(s) | 14 |
| Hpy166II | GTNNAC | 1 cut(s) | 348 |
| Hpy188III | TCNNGA | 1 cut(s) | 131 |
| Hpy8I | GTNNAC | 1 cut(s) | 348 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4V | TGCA | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 5 cut(s) | 48, 86, 153, 204, 326 |
| Hsp92II | CATG | 1 cut(s) | 134 |
| Kzo9I | GATC | 2 cut(s) | 303, 310 |
| LguI | GCTCTTC | 1 cut(s) | 173 |
| LpnPI | CCDG | 4 cut(s) | 27, 60, 177, 192 |
| Lsp1109I | GCAGC | 1 cut(s) | 239 |
| MaeI | CTAG | 2 cut(s) | 99, 315 |
| MaeIII | GTNAC | 1 cut(s) | 79 |
| MalI | GATC | 2 cut(s) | 305, 312 |
| MboI | GATC | 2 cut(s) | 303, 310 |
| MboII | GAAGA | 2 cut(s) | 65, 160 |
| MluCI | AATT | 3 cut(s) | 103, 144, 245 |
| MnlI | CCTC | 3 cut(s) | 43, 58, 231 |
| MseI | TTAA | 3 cut(s) | 143, 159, 215 |
| MspI | CCGG | 1 cut(s) | 14 |
| NdeII | GATC | 2 cut(s) | 303, 310 |
| NlaIII | CATG | 1 cut(s) | 134 |
| PagI | TCATGA | 1 cut(s) | 130 |
| PciSI | GCTCTTC | 1 cut(s) | 173 |
| PfeI | GAWTC | 2 cut(s) | 280, 318 |
| PkrI | GCNGC | 1 cut(s) | 229 |
| PspPI | GGNCC | 1 cut(s) | 240 |
| SapI | GCTCTTC | 1 cut(s) | 173 |
| SaqAI | TTAA | 3 cut(s) | 143, 159, 215 |
| SatI | GCNGC | 1 cut(s) | 228 |
| Sau3AI | GATC | 2 cut(s) | 303, 310 |
| Sau96I | GGNCC | 1 cut(s) | 240 |
| SetI | ASST | 8 cut(s) | 26, 69, 168, 181, 196, 213, 242, 327 |
| SinI | GGWCC | 1 cut(s) | 240 |
| Sse9I | AATT | 3 cut(s) | 103, 144, 245 |
| SspMI | CTAG | 2 cut(s) | 99, 315 |
| TasI | AATT | 3 cut(s) | 103, 144, 245 |
| TfiI | GAWTC | 2 cut(s) | 280, 318 |
| Tru1I | TTAA | 3 cut(s) | 143, 159, 215 |
| Tru9I | TTAA | 3 cut(s) | 143, 159, 215 |
| TscAI | CASTG | 1 cut(s) | 208 |
| TseI | GCWGC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 5 cut(s) | 17, 90, 119, 160, 238 |
| TspRI | CASTG | 1 cut(s) | 208 |
| VpaK11BI | GGWCC | 1 cut(s) | 240 |
| XapI | RAATTY | 1 cut(s) | 245 |
| XspI | CTAG | 2 cut(s) | 99, 315 |