Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 353 - 437 | 9.3e-31 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 758 |
| AclWI | GGATC | 2 cut(s) | 1073, 1241 |
| AcuI | CTGAAG | 4 cut(s) | 30, 69, 785, 1409 |
| AdeI | CACNNNGTG | 1 cut(s) | 965 |
| AfaI | GTAC | 3 cut(s) | 296, 337, 1228 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 236 |
| AflII | CTTAAG | 1 cut(s) | 1007 |
| AhlI | ACTAGT | 1 cut(s) | 338 |
| AjnI | CCWGG | 1 cut(s) | 382 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1412, 1444 |
| AleI | CACNNNNGTG | 1 cut(s) | 743 |
| AluBI | AGCT | 8 cut(s) | 87, 107, 785, 1001, 1423, 1450, 1495, 1501 |
| AluI | AGCT | 8 cut(s) | 87, 107, 785, 1001, 1423, 1450, 1495, 1501 |
| Alw26I | GTCTC | 3 cut(s) | 356, 395, 854 |
| AlwI | GGATC | 2 cut(s) | 1073, 1241 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 47 |
| AoxI | GGCC | 3 cut(s) | 539, 671, 1284 |
| ApeKI | GCWGC | 9 cut(s) | 176, 179, 259, 488, 911, 942, 945, 970, 1475 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 75 |
| AspA2I | CCTAGG | 1 cut(s) | 1271 |
| AspLEI | GCGC | 4 cut(s) | 208, 286, 758, 760 |
| AspS9I | GGNCC | 2 cut(s) | 433, 671 |
| AsuC2I | CCSGG | 1 cut(s) | 543 |
| AsuHPI | GGTGA | 2 cut(s) | 893, 1046 |
| AsuNHI | GCTAGC | 1 cut(s) | 1450 |
| AvaII | GGWCC | 1 cut(s) | 433 |
| AvrII | CCTAGG | 1 cut(s) | 1271 |
| BauI | CACGAG | 1 cut(s) | 154 |
| BbvCI | CCTCAGC | 1 cut(s) | 170 |
| BbvI | GCAGC | 9 cut(s) | 163, 166, 271, 475, 923, 954, 957, 982, 1462 |
| BccI | CCATC | 2 cut(s) | 242, 557 |
| BceAI | ACGGC | 1 cut(s) | 789 |
| BciT130I | CCWGG | 1 cut(s) | 384 |
| BcnI | CCSGG | 1 cut(s) | 543 |
| BcoDI | GTCTC | 3 cut(s) | 356, 395, 854 |
| BcuI | ACTAGT | 1 cut(s) | 338 |
| BfmI | CTRYAG | 2 cut(s) | 102, 1083 |
| BfrI | CTTAAG | 1 cut(s) | 1007 |
| BisI | GCNGC | 9 cut(s) | 177, 180, 260, 489, 912, 943, 946, 971, 1476 |
| BlnI | CCTAGG | 1 cut(s) | 1271 |
| BlsI | GCNGC | 9 cut(s) | 178, 181, 261, 490, 913, 944, 947, 972, 1477 |
| BmcAI | AGTACT | 2 cut(s) | 296, 1228 |
| Bme1390I | CCNGG | 2 cut(s) | 384, 543 |
| Bme18I | GGWCC | 1 cut(s) | 433 |
| BmgT120I | GGNCC | 2 cut(s) | 433, 671 |
| BmiI | GGNNCC | 2 cut(s) | 435, 1506 |
| BmrFI | CCNGG | 2 cut(s) | 384, 543 |
| BmsI | GCATC | 4 cut(s) | 463, 475, 841, 1309 |
| BmtI | GCTAGC | 1 cut(s) | 1454 |
| BpmI | CTGGAG | 1 cut(s) | 660 |
| Bpu10I | CCTNAGC | 1 cut(s) | 170 |
| BpuEI | CTTGAG | 2 cut(s) | 615, 1295 |
| BpuMI | CCSGG | 1 cut(s) | 543 |
| BsaJI | CCNNGG | 1 cut(s) | 1271 |
| BsaXI | ACNNNNNCTCC | 7 cut(s) | 51, 81, 91, 121, 1044, 1074, 1496 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 236 |
| Bse1I | ACTGG | 3 cut(s) | 677, 906, 1234 |
| Bse3DI | GCAATG | 1 cut(s) | 293 |
| BseBI | CCWGG | 1 cut(s) | 384 |
| BseDI | CCNNGG | 1 cut(s) | 1271 |
| BseGI | GGATG | 2 cut(s) | 517, 754 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BseMI | GCAATG | 1 cut(s) | 293 |
| BseMII | CTCAG | 4 cut(s) | 102, 161, 351, 1472 |
| BseNI | ACTGG | 3 cut(s) | 677, 906, 1234 |
| BsePI | GCGCGC | 1 cut(s) | 756 |
| BseRI | GAGGAG | 3 cut(s) | 99, 1068, 1460 |
| BseXI | GCAGC | 9 cut(s) | 163, 166, 271, 475, 923, 954, 957, 982, 1462 |
| BsgI | GTGCAG | 2 cut(s) | 930, 989 |
| Bsh1236I | CGCG | 1 cut(s) | 758 |
| BshFI | GGCC | 3 cut(s) | 541, 673, 1286 |
| BsiSI | CCGG | 1 cut(s) | 542 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BsmAI | GTCTC | 3 cut(s) | 356, 395, 854 |
| BsmI | GAATGC | 1 cut(s) | 424 |
| BsnI | GGCC | 3 cut(s) | 541, 673, 1286 |
| Bsp143I | GATC | 2 cut(s) | 1078, 1246 |
| BspANI | GGCC | 3 cut(s) | 541, 673, 1286 |
| BspCNI | CTCAG | 4 cut(s) | 101, 162, 352, 1471 |
| BspFNI | CGCG | 1 cut(s) | 758 |
| BspLI | GGNNCC | 2 cut(s) | 435, 1506 |
| BspOI | GCTAGC | 1 cut(s) | 1454 |
| BspPI | GGATC | 2 cut(s) | 1073, 1241 |
| BspTI | CTTAAG | 1 cut(s) | 1007 |
| BsrDI | GCAATG | 1 cut(s) | 293 |
| BsrI | ACTGG | 3 cut(s) | 677, 906, 1234 |
| BssECI | CCNNGG | 1 cut(s) | 1271 |
| BssHII | GCGCGC | 1 cut(s) | 756 |
| BssMI | GATC | 2 cut(s) | 1078, 1246 |
| BssSI | CACGAG | 1 cut(s) | 154 |
| BssT1I | CCWWGG | 1 cut(s) | 1271 |
| Bst2BI | CACGAG | 1 cut(s) | 154 |
| Bst2UI | CCWGG | 1 cut(s) | 384 |
| Bst4CI | ACNGT | 6 cut(s) | 97, 367, 745, 1168, 1204, 1279 |
| Bst6I | CTCTTC | 7 cut(s) | 6, 591, 612, 656, 986, 1395, 1437 |
| BstAFI | CTTAAG | 1 cut(s) | 1007 |
| BstC8I | GCNNGC | 3 cut(s) | 144, 758, 1452 |
| BstDEI | CTNAG | 5 cut(s) | 88, 170, 360, 733, 1458 |
| BstF5I | GGATG | 2 cut(s) | 517, 754 |
| BstFNI | CGCG | 1 cut(s) | 758 |
| BstHHI | GCGC | 4 cut(s) | 208, 286, 758, 760 |
| BstKTI | GATC | 2 cut(s) | 1081, 1249 |
| BstMAI | GTCTC | 3 cut(s) | 356, 395, 854 |
| BstMBI | GATC | 2 cut(s) | 1078, 1246 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 766, 782 |
| BstNI | CCWGG | 1 cut(s) | 384 |
| BstNSI | RCATGY | 1 cut(s) | 480 |
| BstSCI | CCNGG | 2 cut(s) | 382, 541 |
| BstSFI | CTRYAG | 2 cut(s) | 102, 1083 |
| BstUI | CGCG | 1 cut(s) | 758 |
| BstV1I | GCAGC | 9 cut(s) | 163, 166, 271, 475, 923, 954, 957, 982, 1462 |
| BsuRI | GGCC | 3 cut(s) | 541, 673, 1286 |
| BtsCI | GGATG | 2 cut(s) | 517, 754 |
| BtsIMutI | CAGTG | 3 cut(s) | 750, 913, 1209 |
| Cac8I | GCNNGC | 3 cut(s) | 144, 758, 1452 |
| CaiI | CAGNNNCTG | 1 cut(s) | 47 |
| CfoI | GCGC | 4 cut(s) | 208, 286, 758, 760 |
| Cfr13I | GGNCC | 2 cut(s) | 433, 671 |
| Csp6I | GTAC | 3 cut(s) | 295, 336, 1227 |
| CviAII | CATG | 2 cut(s) | 477, 878 |
| CviQI | GTAC | 3 cut(s) | 295, 336, 1227 |
| DdeI | CTNAG | 5 cut(s) | 88, 170, 360, 733, 1458 |
| DpnI | GATC | 2 cut(s) | 1080, 1248 |
| DpnII | GATC | 2 cut(s) | 1078, 1246 |
| DraIII | CACNNNGTG | 1 cut(s) | 965 |
| Eam1104I | CTCTTC | 7 cut(s) | 6, 591, 612, 656, 986, 1395, 1437 |
| EarI | CTCTTC | 7 cut(s) | 6, 591, 612, 656, 986, 1395, 1437 |
| Eco130I | CCWWGG | 1 cut(s) | 1271 |
| Eco147I | AGGCCT | 1 cut(s) | 1286 |
| Eco47I | GGWCC | 1 cut(s) | 433 |
| Eco57I | CTGAAG | 4 cut(s) | 30, 69, 785, 1409 |
| EcoO109I | RGGNCCY | 1 cut(s) | 671 |
| EcoRII | CCWGG | 1 cut(s) | 382 |
| EcoT14I | CCWWGG | 1 cut(s) | 1271 |
| EcoT22I | ATGCAT | 1 cut(s) | 478 |
| ErhI | CCWWGG | 1 cut(s) | 1271 |
| FaeI | CATG | 2 cut(s) | 480, 881 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 990, 1022 |
| FatI | CATG | 2 cut(s) | 476, 877 |
| Fnu4HI | GCNGC | 9 cut(s) | 177, 180, 260, 489, 912, 943, 946, 971, 1476 |
| FokI | GGATG | 2 cut(s) | 524, 761 |
| Fsp4HI | GCNGC | 9 cut(s) | 177, 180, 260, 489, 912, 943, 946, 971, 1476 |
| GlaI | GCGC | 4 cut(s) | 207, 285, 757, 759 |
| GluI | GCNGC | 9 cut(s) | 177, 180, 260, 489, 912, 943, 946, 971, 1476 |
| GsuI | CTGGAG | 1 cut(s) | 660 |
| HaeIII | GGCC | 3 cut(s) | 541, 673, 1286 |
| HapII | CCGG | 1 cut(s) | 542 |
| HhaI | GCGC | 4 cut(s) | 208, 286, 758, 760 |
| Hin1II | CATG | 2 cut(s) | 480, 881 |
| Hin6I | GCGC | 4 cut(s) | 206, 284, 756, 758 |
| HinP1I | GCGC | 4 cut(s) | 206, 284, 756, 758 |
| HincII | GTYRAC | 1 cut(s) | 1200 |
| HindII | GTYRAC | 1 cut(s) | 1200 |
| HindIII | AAGCTT | 2 cut(s) | 783, 1421 |
| HinfI | GANTC | 5 cut(s) | 32, 320, 403, 626, 893 |
| HpaII | CCGG | 1 cut(s) | 542 |
| HphI | GGTGA | 2 cut(s) | 893, 1046 |
| Hpy166II | GTNNAC | 4 cut(s) | 344, 730, 793, 1200 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 91, 312, 469, 688, 723, 1318 |
| Hpy188III | TCNNGA | 4 cut(s) | 195, 324, 482, 1439 |
| Hpy8I | GTNNAC | 4 cut(s) | 344, 730, 793, 1200 |
| HpyAV | CCTTC | 5 cut(s) | 44, 156, 605, 971, 1025 |
| HpyCH4III | ACNGT | 6 cut(s) | 97, 367, 745, 1168, 1204, 1279 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 766, 782 |
| HpyF3I | CTNAG | 5 cut(s) | 88, 170, 360, 733, 1458 |
| Hsp92II | CATG | 2 cut(s) | 480, 881 |
| HspAI | GCGC | 4 cut(s) | 206, 284, 756, 758 |
| Kzo9I | GATC | 2 cut(s) | 1078, 1246 |
| LmnI | GCTCC | 5 cut(s) | 112, 256, 1447, 1498, 1504 |
| Lsp1109I | GCAGC | 9 cut(s) | 163, 166, 271, 475, 923, 954, 957, 982, 1462 |
| LweI | GCATC | 4 cut(s) | 463, 475, 841, 1309 |
| MaeIII | GTNAC | 3 cut(s) | 37, 97, 1332 |
| MalI | GATC | 2 cut(s) | 1080, 1248 |
| MboI | GATC | 2 cut(s) | 1078, 1246 |
| MfeI | CAATTG | 1 cut(s) | 531 |
| MluCI | AATT | 7 cut(s) | 264, 515, 531, 1044, 1303, 1323, 1434 |
| MlyI | GAGTC | 1 cut(s) | 397 |
| MmeI | TCCRAC | 3 cut(s) | 411, 489, 1030 |
| Mph1103I | ATGCAT | 1 cut(s) | 478 |
| MroXI | GAANNNNTTC | 1 cut(s) | 75 |
| MseI | TTAA | 3 cut(s) | 1008, 1265, 1289 |
| MslI | CAYNNNNRTG | 1 cut(s) | 743 |
| MspCI | CTTAAG | 1 cut(s) | 1007 |
| MspI | CCGG | 1 cut(s) | 542 |
| MspR9I | CCNGG | 2 cut(s) | 384, 543 |
| MunI | CAATTG | 1 cut(s) | 531 |
| Mva1269I | GAATGC | 1 cut(s) | 424 |
| MvaI | CCWGG | 1 cut(s) | 384 |
| MvnI | CGCG | 1 cut(s) | 758 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 766, 782 |
| NciI | CCSGG | 1 cut(s) | 543 |
| NdeII | GATC | 2 cut(s) | 1078, 1246 |
| NheI | GCTAGC | 1 cut(s) | 1450 |
| NlaIII | CATG | 2 cut(s) | 480, 881 |
| NlaIV | GGNNCC | 2 cut(s) | 435, 1506 |
| NsiI | ATGCAT | 1 cut(s) | 478 |
| NspI | RCATGY | 1 cut(s) | 480 |
| OliI | CACNNNNGTG | 1 cut(s) | 743 |
| PauI | GCGCGC | 1 cut(s) | 756 |
| PceI | AGGCCT | 1 cut(s) | 1286 |
| PctI | GAATGC | 1 cut(s) | 424 |
| PdmI | GAANNNNTTC | 1 cut(s) | 75 |
| PfeI | GAWTC | 4 cut(s) | 32, 320, 626, 893 |
| PkrI | GCNGC | 9 cut(s) | 178, 181, 261, 490, 913, 944, 947, 972, 1477 |
| PleI | GAGTC | 1 cut(s) | 397 |
| PpsI | GAGTC | 1 cut(s) | 397 |
| Psp6I | CCWGG | 1 cut(s) | 382 |
| PspGI | CCWGG | 1 cut(s) | 382 |
| PspN4I | GGNNCC | 2 cut(s) | 435, 1506 |
| PspPI | GGNCC | 2 cut(s) | 433, 671 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 60, 92 |
| PstNI | CAGNNNCTG | 1 cut(s) | 47 |
| PteI | GCGCGC | 1 cut(s) | 756 |
| RsaI | GTAC | 3 cut(s) | 296, 337, 1228 |
| RsaNI | GTAC | 3 cut(s) | 295, 336, 1227 |
| RseI | CAYNNNNRTG | 1 cut(s) | 743 |
| SaqAI | TTAA | 3 cut(s) | 1008, 1265, 1289 |
| SatI | GCNGC | 9 cut(s) | 177, 180, 260, 489, 912, 943, 946, 971, 1476 |
| Sau3AI | GATC | 2 cut(s) | 1078, 1246 |
| Sau96I | GGNCC | 2 cut(s) | 433, 671 |
| ScaI | AGTACT | 2 cut(s) | 296, 1228 |
| SchI | GAGTC | 1 cut(s) | 397 |
| ScrFI | CCNGG | 2 cut(s) | 384, 543 |
| SfaNI | GCATC | 4 cut(s) | 463, 475, 841, 1309 |
| SfcI | CTRYAG | 2 cut(s) | 102, 1083 |
| SinI | GGWCC | 1 cut(s) | 433 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 743 |
| SmlI | CTYRAG | 3 cut(s) | 630, 1007, 1310 |
| SmoI | CTYRAG | 3 cut(s) | 630, 1007, 1310 |
| SpeI | ACTAGT | 1 cut(s) | 338 |
| Sse9I | AATT | 7 cut(s) | 264, 515, 531, 1044, 1303, 1323, 1434 |
| SseBI | AGGCCT | 1 cut(s) | 1286 |
| StuI | AGGCCT | 1 cut(s) | 1286 |
| StyD4I | CCNGG | 2 cut(s) | 382, 541 |
| StyI | CCWWGG | 1 cut(s) | 1271 |
| TaaI | ACNGT | 6 cut(s) | 97, 367, 745, 1168, 1204, 1279 |
| TaqI | TCGA | 1 cut(s) | 393 |
| TasI | AATT | 7 cut(s) | 264, 515, 531, 1044, 1303, 1323, 1434 |
| TatI | WGTACW | 2 cut(s) | 294, 1226 |
| TfiI | GAWTC | 4 cut(s) | 32, 320, 626, 893 |
| Tru1I | TTAA | 3 cut(s) | 1008, 1265, 1289 |
| Tru9I | TTAA | 3 cut(s) | 1008, 1265, 1289 |
| TscAI | CASTG | 3 cut(s) | 750, 913, 1209 |
| TseI | GCWGC | 9 cut(s) | 176, 179, 259, 488, 911, 942, 945, 970, 1475 |
| TspDTI | ATGAA | 8 cut(s) | 105, 431, 528, 603, 609, 624, 1209, 1251 |
| TspRI | CASTG | 3 cut(s) | 750, 913, 1209 |
| Vha464I | CTTAAG | 1 cut(s) | 1007 |
| VpaK11BI | GGWCC | 1 cut(s) | 433 |
| XbaI | TCTAGA | 2 cut(s) | 323, 481 |
| XceI | RCATGY | 1 cut(s) | 480 |
| XmaJI | CCTAGG | 1 cut(s) | 1271 |
| XmnI | GAANNNNTTC | 1 cut(s) | 75 |
| ZrmI | AGTACT | 2 cut(s) | 296, 1228 |
| Zsp2I | ATGCAT | 1 cut(s) | 478 |