protein dimerization activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1038 |
| Acc65I | GGTACC | 1 cut(s) | 136 |
| AccB1I | GGYRCC | 1 cut(s) | 136 |
| AccII | CGCG | 1 cut(s) | 538 |
| AclWI | GGATC | 2 cut(s) | 1352, 1365 |
| AcsI | RAATTY | 9 cut(s) | 222, 414, 452, 507, 829, 904, 1000, 1301, 1525 |
| AcuI | CTGAAG | 1 cut(s) | 1704 |
| AfaI | GTAC | 5 cut(s) | 138, 196, 632, 1321, 1664 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 640, 641, 1577 |
| AflIII | ACRYGT | 2 cut(s) | 428, 555 |
| AhlI | ACTAGT | 3 cut(s) | 80, 197, 1132 |
| Alw21I | GWGCWC | 1 cut(s) | 1552 |
| Alw26I | GTCTC | 2 cut(s) | 913, 1957 |
| AlwI | GGATC | 2 cut(s) | 1352, 1365 |
| Ama87I | CYCGRG | 1 cut(s) | 1543 |
| AoxI | GGCC | 1 cut(s) | 1043 |
| ApeKI | GCWGC | 1 cut(s) | 1945 |
| ApoI | RAATTY | 9 cut(s) | 222, 414, 452, 507, 829, 904, 1000, 1301, 1525 |
| AseI | ATTAAT | 1 cut(s) | 12 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| Asp718I | GGTACC | 1 cut(s) | 136 |
| AspA2I | CCTAGG | 1 cut(s) | 1511 |
| AspLEI | GCGC | 1 cut(s) | 690 |
| AspS9I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| AsuC2I | CCSGG | 1 cut(s) | 1554 |
| AsuHPI | GGTGA | 1 cut(s) | 2066 |
| AsuNHI | GCTAGC | 1 cut(s) | 1948 |
| AvaI | CYCGRG | 1 cut(s) | 1543 |
| AvaII | GGWCC | 2 cut(s) | 251, 863 |
| AvrII | CCTAGG | 1 cut(s) | 1511 |
| BaeGI | GKGCMC | 1 cut(s) | 820 |
| BamHI | GGATCC | 1 cut(s) | 1357 |
| BanI | GGYRCC | 1 cut(s) | 136 |
| BbsI | GAAGAC | 1 cut(s) | 217 |
| Bbv12I | GWGCWC | 1 cut(s) | 1552 |
| BbvI | GCAGC | 1 cut(s) | 1957 |
| BccI | CCATC | 5 cut(s) | 719, 839, 874, 1111, 1987 |
| BclI | TGATCA | 1 cut(s) | 1411 |
| BcnI | CCSGG | 1 cut(s) | 1554 |
| BcoDI | GTCTC | 2 cut(s) | 913, 1957 |
| BcuI | ACTAGT | 3 cut(s) | 80, 197, 1132 |
| BfaI | CTAG | 9 cut(s) | 72, 81, 186, 198, 1133, 1362, 1512, 1767, 1949 |
| BfmI | CTRYAG | 3 cut(s) | 1560, 1749, 1797 |
| BisI | GCNGC | 1 cut(s) | 1946 |
| BlnI | CCTAGG | 1 cut(s) | 1511 |
| BlpI | GCTNAGC | 1 cut(s) | 1932 |
| BlsI | GCNGC | 1 cut(s) | 1947 |
| Bme1390I | CCNGG | 1 cut(s) | 1554 |
| Bme18I | GGWCC | 2 cut(s) | 251, 863 |
| BmeT110I | CYCGRG | 1 cut(s) | 1543 |
| BmgT120I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| BmiI | GGNNCC | 4 cut(s) | 138, 253, 1359, 2106 |
| BmrFI | CCNGG | 1 cut(s) | 1554 |
| BmsI | GCATC | 4 cut(s) | 65, 1169, 1267, 1911 |
| BmtI | GCTAGC | 1 cut(s) | 1952 |
| BpiI | GAAGAC | 1 cut(s) | 217 |
| BpmI | CTGGAG | 2 cut(s) | 57, 2123 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1932 |
| BpuEI | CTTGAG | 2 cut(s) | 797, 1879 |
| BpuMI | CCSGG | 1 cut(s) | 1554 |
| Bsa29I | ATCGAT | 1 cut(s) | 1151 |
| BsaAI | YACGTR | 2 cut(s) | 305, 854 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1229, 1698 |
| BsaJI | CCNNGG | 2 cut(s) | 124, 1511 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1818, 1848 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 640, 641, 1577 |
| Bse1I | ACTGG | 2 cut(s) | 40, 1994 |
| Bse3DI | GCAATG | 2 cut(s) | 1296, 1565 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1229, 1698 |
| BseCI | ATCGAT | 1 cut(s) | 1151 |
| BseDI | CCNNGG | 2 cut(s) | 124, 1511 |
| BseGI | GGATG | 7 cut(s) | 10, 529, 1103, 1160, 1282, 1926, 1998 |
| BseJI | GATNNNNATC | 2 cut(s) | 1229, 1698 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 640, 641, 1577 |
| BseMI | GCAATG | 2 cut(s) | 1296, 1565 |
| BseMII | CTCAG | 2 cut(s) | 1833, 1946 |
| BseNI | ACTGG | 2 cut(s) | 40, 1994 |
| BseSI | GKGCMC | 1 cut(s) | 820 |
| BseXI | GCAGC | 1 cut(s) | 1957 |
| BsgI | GTGCAG | 2 cut(s) | 552, 1842 |
| Bsh1236I | CGCG | 1 cut(s) | 538 |
| BshFI | GGCC | 1 cut(s) | 1045 |
| BshNI | GGYRCC | 1 cut(s) | 136 |
| BshVI | ATCGAT | 1 cut(s) | 1151 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1552 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1543 |
| BsiSI | CCGG | 1 cut(s) | 1553 |
| BslFI | GGGAC | 2 cut(s) | 107, 237 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 640, 641, 1577 |
| BsmAI | GTCTC | 2 cut(s) | 913, 1957 |
| BsmFI | GGGAC | 2 cut(s) | 107, 237 |
| BsmI | GAATGC | 1 cut(s) | 690 |
| BsnI | GGCC | 1 cut(s) | 1045 |
| BsoBI | CYCGRG | 1 cut(s) | 1543 |
| Bsp1286I | GDGCHC | 2 cut(s) | 820, 1552 |
| Bsp143I | GATC | 3 cut(s) | 1082, 1357, 1411 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1932 |
| BspANI | GGCC | 1 cut(s) | 1045 |
| BspCNI | CTCAG | 2 cut(s) | 1834, 1945 |
| BspDI | ATCGAT | 1 cut(s) | 1151 |
| BspFNI | CGCG | 1 cut(s) | 538 |
| BspHI | TCATGA | 1 cut(s) | 226 |
| BspLI | GGNNCC | 4 cut(s) | 138, 253, 1359, 2106 |
| BspOI | GCTAGC | 1 cut(s) | 1952 |
| BspPI | GGATC | 2 cut(s) | 1352, 1365 |
| BspT107I | GGYRCC | 1 cut(s) | 136 |
| BsrDI | GCAATG | 2 cut(s) | 1296, 1565 |
| BsrI | ACTGG | 2 cut(s) | 40, 1994 |
| BssECI | CCNNGG | 2 cut(s) | 124, 1511 |
| BssMI | GATC | 3 cut(s) | 1082, 1357, 1411 |
| BssT1I | CCWWGG | 1 cut(s) | 1511 |
| Bst4CI | ACNGT | 3 cut(s) | 125, 1798, 2061 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1286 |
| BstBAI | YACGTR | 2 cut(s) | 305, 854 |
| BstC8I | GCNNGC | 3 cut(s) | 1461, 1855, 1950 |
| BstDEI | CTNAG | 5 cut(s) | 63, 173, 1170, 1842, 1932 |
| BstDSI | CCRYGG | 1 cut(s) | 124 |
| BstF5I | GGATG | 7 cut(s) | 10, 529, 1103, 1160, 1282, 1926, 1998 |
| BstFNI | CGCG | 1 cut(s) | 538 |
| BstHHI | GCGC | 1 cut(s) | 690 |
| BstKTI | GATC | 3 cut(s) | 1085, 1360, 1414 |
| BstMAI | GTCTC | 2 cut(s) | 913, 1957 |
| BstMBI | GATC | 3 cut(s) | 1082, 1357, 1411 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1247, 1286, 1505, 1942 |
| BstNSI | RCATGY | 3 cut(s) | 432, 559, 753 |
| BstSCI | CCNGG | 1 cut(s) | 1552 |
| BstSFI | CTRYAG | 3 cut(s) | 1560, 1749, 1797 |
| BstSLI | GKGCMC | 1 cut(s) | 820 |
| BstSNI | TACGTA | 1 cut(s) | 854 |
| BstUI | CGCG | 1 cut(s) | 538 |
| BstV1I | GCAGC | 1 cut(s) | 1957 |
| BstV2I | GAAGAC | 1 cut(s) | 217 |
| BstX2I | RGATCY | 1 cut(s) | 1357 |
| BstYI | RGATCY | 1 cut(s) | 1357 |
| Bsu15I | ATCGAT | 1 cut(s) | 1151 |
| BsuRI | GGCC | 1 cut(s) | 1045 |
| BsuTUI | ATCGAT | 1 cut(s) | 1151 |
| BtgI | CCRYGG | 1 cut(s) | 124 |
| BtgZI | GCGATG | 2 cut(s) | 519, 823 |
| BtsCI | GGATG | 7 cut(s) | 10, 529, 1103, 1160, 1282, 1926, 1998 |
| BtsI | GCAGTG | 1 cut(s) | 789 |
| BtsIMutI | CAGTG | 1 cut(s) | 789 |
| Cac8I | GCNNGC | 3 cut(s) | 1461, 1855, 1950 |
| CciI | TCATGA | 1 cut(s) | 226 |
| CfoI | GCGC | 1 cut(s) | 690 |
| Cfr13I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| ClaI | ATCGAT | 1 cut(s) | 1151 |
| CseI | GACGC | 1 cut(s) | 527 |
| Csp6I | GTAC | 5 cut(s) | 137, 195, 631, 1320, 1663 |
| CviQI | GTAC | 5 cut(s) | 137, 195, 631, 1320, 1663 |
| DdeI | CTNAG | 5 cut(s) | 63, 173, 1170, 1842, 1932 |
| DpnI | GATC | 3 cut(s) | 1084, 1359, 1413 |
| DpnII | GATC | 3 cut(s) | 1082, 1357, 1411 |
| DraI | TTTAAA | 2 cut(s) | 373, 597 |
| Eco105I | TACGTA | 1 cut(s) | 854 |
| Eco130I | CCWWGG | 1 cut(s) | 1511 |
| Eco32I | GATATC | 1 cut(s) | 1231 |
| Eco47I | GGWCC | 2 cut(s) | 251, 863 |
| Eco57I | CTGAAG | 1 cut(s) | 1704 |
| Eco88I | CYCGRG | 1 cut(s) | 1543 |
| EcoO109I | RGGNCCY | 2 cut(s) | 251, 1043 |
| EcoRI | GAATTC | 2 cut(s) | 904, 1000 |
| EcoRV | GATATC | 1 cut(s) | 1231 |
| EcoT14I | CCWWGG | 1 cut(s) | 1511 |
| EcoT22I | ATGCAT | 2 cut(s) | 1282, 1403 |
| ErhI | CCWWGG | 1 cut(s) | 1511 |
| FaqI | GGGAC | 2 cut(s) | 107, 237 |
| FbaI | TGATCA | 1 cut(s) | 1411 |
| Fnu4HI | GCNGC | 1 cut(s) | 1946 |
| FokI | GGATG | 7 cut(s) | 17, 536, 1090, 1147, 1289, 1933, 2005 |
| Fsp4HI | GCNGC | 1 cut(s) | 1946 |
| FspBI | CTAG | 9 cut(s) | 72, 81, 186, 198, 1133, 1362, 1512, 1767, 1949 |
| GlaI | GCGC | 1 cut(s) | 689 |
| GluI | GCNGC | 1 cut(s) | 1946 |
| GsuI | CTGGAG | 2 cut(s) | 57, 2123 |
| HaeIII | GGCC | 1 cut(s) | 1045 |
| HapII | CCGG | 1 cut(s) | 1553 |
| HgaI | GACGC | 1 cut(s) | 527 |
| HhaI | GCGC | 1 cut(s) | 690 |
| Hin6I | GCGC | 1 cut(s) | 688 |
| HinP1I | GCGC | 1 cut(s) | 688 |
| HindIII | AAGCTT | 1 cut(s) | 1332 |
| HpaII | CCGG | 1 cut(s) | 1553 |
| HphI | GGTGA | 1 cut(s) | 2066 |
| Hpy166II | GTNNAC | 3 cut(s) | 78, 851, 2057 |
| Hpy188I | TCNGA | 7 cut(s) | 523, 1108, 1258, 1522, 1807, 1843, 2029 |
| Hpy188III | TCNNGA | 6 cut(s) | 227, 254, 264, 1080, 2040, 2102 |
| Hpy8I | GTNNAC | 3 cut(s) | 78, 851, 2057 |
| Hpy99I | CGWCG | 1 cut(s) | 390 |
| HpyAV | CCTTC | 3 cut(s) | 494, 1288, 2006 |
| HpyCH4III | ACNGT | 3 cut(s) | 125, 1798, 2061 |
| HpyCH4IV | ACGT | 2 cut(s) | 304, 853 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1247, 1286, 1505, 1942 |
| HpyF3I | CTNAG | 5 cut(s) | 63, 173, 1170, 1842, 1932 |
| HpySE526I | ACGT | 2 cut(s) | 304, 853 |
| HspAI | GCGC | 1 cut(s) | 688 |
| KpnI | GGTACC | 1 cut(s) | 140 |
| Ksp22I | TGATCA | 1 cut(s) | 1411 |
| Kzo9I | GATC | 3 cut(s) | 1082, 1357, 1411 |
| LmnI | GCTCC | 3 cut(s) | 38, 1555, 2104 |
| Lsp1109I | GCAGC | 1 cut(s) | 1957 |
| LweI | GCATC | 4 cut(s) | 65, 1169, 1267, 1911 |
| MaeI | CTAG | 9 cut(s) | 72, 81, 186, 198, 1133, 1362, 1512, 1767, 1949 |
| MaeII | ACGT | 2 cut(s) | 304, 853 |
| MaeIII | GTNAC | 5 cut(s) | 25, 551, 558, 648, 2061 |
| MalI | GATC | 3 cut(s) | 1084, 1359, 1413 |
| MboI | GATC | 3 cut(s) | 1082, 1357, 1411 |
| MfeI | CAATTG | 1 cut(s) | 1122 |
| MflI | RGATCY | 1 cut(s) | 1357 |
| MhlI | GDGCHC | 2 cut(s) | 820, 1552 |
| MlyI | GAGTC | 5 cut(s) | 490, 656, 1817, 1870, 1959 |
| MmeI | TCCRAC | 1 cut(s) | 1363 |
| Mph1103I | ATGCAT | 2 cut(s) | 1282, 1403 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MspI | CCGG | 1 cut(s) | 1553 |
| MspR9I | CCNGG | 1 cut(s) | 1554 |
| MunI | CAATTG | 1 cut(s) | 1122 |
| Mva1269I | GAATGC | 1 cut(s) | 690 |
| MvnI | CGCG | 1 cut(s) | 538 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1247, 1286, 1505, 1942 |
| NciI | CCSGG | 1 cut(s) | 1554 |
| NdeII | GATC | 3 cut(s) | 1082, 1357, 1411 |
| NheI | GCTAGC | 1 cut(s) | 1948 |
| NlaIV | GGNNCC | 4 cut(s) | 138, 253, 1359, 2106 |
| NmuCI | GTSAC | 3 cut(s) | 25, 558, 648 |
| NsiI | ATGCAT | 2 cut(s) | 1282, 1403 |
| NspI | RCATGY | 3 cut(s) | 432, 559, 753 |
| PaeR7I | CTCGAG | 1 cut(s) | 1543 |
| PagI | TCATGA | 1 cut(s) | 226 |
| PciI | ACATGT | 2 cut(s) | 428, 555 |
| PctI | GAATGC | 1 cut(s) | 690 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 6 cut(s) | 382, 1076, 1736, 2024, 2036, 2078 |
| PkrI | GCNGC | 1 cut(s) | 1947 |
| PleI | GAGTC | 5 cut(s) | 489, 655, 1816, 1869, 1959 |
| PpsI | GAGTC | 5 cut(s) | 489, 655, 1816, 1869, 1959 |
| Ppu21I | YACGTR | 2 cut(s) | 305, 854 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| PscI | ACATGT | 2 cut(s) | 428, 555 |
| PshBI | ATTAAT | 1 cut(s) | 12 |
| PsiI | TTATAA | 1 cut(s) | 1038 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| PspN4I | GGNNCC | 4 cut(s) | 138, 253, 1359, 2106 |
| PspPI | GGNCC | 3 cut(s) | 251, 863, 1043 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| PspXI | VCTCGAGB | 1 cut(s) | 1543 |
| PsuI | RGATCY | 1 cut(s) | 1357 |
| RsaI | GTAC | 5 cut(s) | 138, 196, 632, 1321, 1664 |
| RsaNI | GTAC | 5 cut(s) | 137, 195, 631, 1320, 1663 |
| SatI | GCNGC | 1 cut(s) | 1946 |
| Sau3AI | GATC | 3 cut(s) | 1082, 1357, 1411 |
| Sau96I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| SchI | GAGTC | 5 cut(s) | 490, 656, 1817, 1870, 1959 |
| ScrFI | CCNGG | 1 cut(s) | 1554 |
| SduI | GDGCHC | 2 cut(s) | 820, 1552 |
| SfaNI | GCATC | 4 cut(s) | 65, 1169, 1267, 1911 |
| SfcI | CTRYAG | 3 cut(s) | 1560, 1749, 1797 |
| Sfr274I | CTCGAG | 1 cut(s) | 1543 |
| SinI | GGWCC | 2 cut(s) | 251, 863 |
| SlaI | CTCGAG | 1 cut(s) | 1543 |
| SmlI | CTYRAG | 3 cut(s) | 776, 1543, 1858 |
| SmoI | CTYRAG | 3 cut(s) | 776, 1543, 1858 |
| SnaBI | TACGTA | 1 cut(s) | 854 |
| SpeI | ACTAGT | 3 cut(s) | 80, 197, 1132 |
| SspI | AATATT | 3 cut(s) | 705, 973, 1489 |
| SspMI | CTAG | 9 cut(s) | 72, 81, 186, 198, 1133, 1362, 1512, 1767, 1949 |
| StyD4I | CCNGG | 1 cut(s) | 1552 |
| StyI | CCWWGG | 1 cut(s) | 1511 |
| TaaI | ACNGT | 3 cut(s) | 125, 1798, 2061 |
| TaiI | ACGT | 2 cut(s) | 307, 856 |
| TaqI | TCGA | 3 cut(s) | 388, 1151, 1544 |
| TatI | WGTACW | 1 cut(s) | 1662 |
| TfiI | GAWTC | 6 cut(s) | 382, 1076, 1736, 2024, 2036, 2078 |
| TscAI | CASTG | 1 cut(s) | 789 |
| TseFI | GTSAC | 3 cut(s) | 25, 558, 648 |
| TseI | GCWGC | 1 cut(s) | 1945 |
| Tsp45I | GTSAC | 3 cut(s) | 25, 558, 648 |
| TspRI | CASTG | 1 cut(s) | 789 |
| VpaK11BI | GGWCC | 2 cut(s) | 251, 863 |
| VspI | ATTAAT | 1 cut(s) | 12 |
| XapI | RAATTY | 9 cut(s) | 222, 414, 452, 507, 829, 904, 1000, 1301, 1525 |
| XceI | RCATGY | 3 cut(s) | 432, 559, 753 |
| XhoI | CTCGAG | 1 cut(s) | 1543 |
| XmaJI | CCTAGG | 1 cut(s) | 1511 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 9 cut(s) | 72, 81, 186, 198, 1133, 1362, 1512, 1767, 1949 |
| Zsp2I | ATGCAT | 2 cut(s) | 1282, 1403 |