Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2380 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 962 |
| Acc16I | TGCGCA | 1 cut(s) | 1026 |
| Acc36I | ACCTGC | 1 cut(s) | 2380 |
| AccI | GTMKAC | 4 cut(s) | 80, 200, 266, 1808 |
| AciI | CCGC | 2 cut(s) | 315, 739 |
| AclWI | GGATC | 6 cut(s) | 554, 680, 1070, 1733, 2291, 2304 |
| AcoI | YGGCCR | 1 cut(s) | 1521 |
| AcsI | RAATTY | 3 cut(s) | 1778, 2377, 2418 |
| AcuI | CTGAAG | 1 cut(s) | 2244 |
| AfaI | GTAC | 2 cut(s) | 911, 1995 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 286, 984 |
| AflII | CTTAAG | 1 cut(s) | 944 |
| AjnI | CCWGG | 1 cut(s) | 875 |
| Alw21I | GWGCWC | 2 cut(s) | 50, 2371 |
| Alw26I | GTCTC | 1 cut(s) | 970 |
| Alw44I | GTGCAC | 1 cut(s) | 2367 |
| AlwI | GGATC | 6 cut(s) | 554, 680, 1070, 1733, 2291, 2304 |
| AoxI | GGCC | 5 cut(s) | 478, 1521, 1568, 1773, 2334 |
| ApaLI | GTGCAC | 1 cut(s) | 2367 |
| ApeKI | GCWGC | 9 cut(s) | 107, 154, 181, 227, 274, 1051, 1334, 1487, 2477 |
| ApoI | RAATTY | 3 cut(s) | 1778, 2377, 2418 |
| AseI | ATTAAT | 1 cut(s) | 1890 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2270 |
| AspLEI | GCGC | 3 cut(s) | 159, 186, 1027 |
| AspS9I | GGNCC | 5 cut(s) | 478, 1568, 1843, 2041, 2335 |
| AsuHPI | GGTGA | 5 cut(s) | 132, 563, 964, 1030, 1075 |
| AsuNHI | GCTAGC | 1 cut(s) | 2218 |
| AvaII | GGWCC | 2 cut(s) | 1843, 2041 |
| BaeGI | GKGCMC | 1 cut(s) | 2371 |
| BamHI | GGATCC | 1 cut(s) | 2296 |
| BbsI | GAAGAC | 1 cut(s) | 2138 |
| Bbv12I | GWGCWC | 2 cut(s) | 50, 2371 |
| BbvI | GCAGC | 9 cut(s) | 119, 166, 193, 239, 286, 1038, 1321, 1474, 2489 |
| BccI | CCATC | 6 cut(s) | 151, 379, 388, 1319, 1452, 2018 |
| BceAI | ACGGC | 3 cut(s) | 61, 181, 2222 |
| BciT130I | CCWGG | 1 cut(s) | 877 |
| BciVI | GTATCC | 1 cut(s) | 728 |
| BclI | TGATCA | 3 cut(s) | 783, 1449, 2116 |
| BcoDI | GTCTC | 1 cut(s) | 970 |
| BfaI | CTAG | 9 cut(s) | 627, 902, 1179, 1409, 1455, 1901, 2070, 2219, 2286 |
| BfoI | RGCGCY | 2 cut(s) | 160, 187 |
| BfrI | CTTAAG | 1 cut(s) | 944 |
| BfuAI | ACCTGC | 1 cut(s) | 2380 |
| BfuI | GTATCC | 1 cut(s) | 728 |
| BisI | GCNGC | 9 cut(s) | 108, 155, 182, 228, 275, 1052, 1335, 1488, 2478 |
| BlsI | GCNGC | 9 cut(s) | 109, 156, 183, 229, 276, 1053, 1336, 1489, 2479 |
| Bme1390I | CCNGG | 1 cut(s) | 877 |
| Bme18I | GGWCC | 2 cut(s) | 1843, 2041 |
| BmgT120I | GGNCC | 5 cut(s) | 478, 1568, 1843, 2041, 2335 |
| BmiI | GGNNCC | 4 cut(s) | 291, 479, 1845, 2298 |
| BmrFI | CCNGG | 1 cut(s) | 877 |
| BmrI | ACTGGG | 2 cut(s) | 112, 232 |
| BmsI | GCATC | 1 cut(s) | 1585 |
| BmtI | GCTAGC | 1 cut(s) | 2222 |
| BmuI | ACTGGG | 2 cut(s) | 112, 232 |
| BpiI | GAAGAC | 1 cut(s) | 2138 |
| Bpu10I | CCTNAGC | 2 cut(s) | 891, 2278 |
| BpuEI | CTTGAG | 2 cut(s) | 1139, 2462 |
| Bsa29I | ATCGAT | 1 cut(s) | 992 |
| BsaBI | GATNNNNATC | 3 cut(s) | 684, 785, 2121 |
| BsaJI | CCNNGG | 2 cut(s) | 51, 2464 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 286, 984 |
| Bse118I | RCCGGY | 1 cut(s) | 398 |
| Bse1I | ACTGG | 6 cut(s) | 107, 227, 736, 1086, 1912, 2524 |
| Bse3DI | GCAATG | 1 cut(s) | 1884 |
| Bse8I | GATNNNNATC | 3 cut(s) | 684, 785, 2121 |
| BseBI | CCWGG | 1 cut(s) | 877 |
| BseCI | ATCGAT | 1 cut(s) | 992 |
| BseDI | CCNNGG | 2 cut(s) | 51, 2464 |
| BseGI | GGATG | 6 cut(s) | 799, 1330, 1450, 1600, 2029, 2085 |
| BseJI | GATNNNNATC | 3 cut(s) | 684, 785, 2121 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 286, 984 |
| BseMI | GCAATG | 1 cut(s) | 1884 |
| BseMII | CTCAG | 5 cut(s) | 103, 223, 624, 1610, 2076 |
| BseNI | ACTGG | 6 cut(s) | 107, 227, 736, 1086, 1912, 2524 |
| BseRI | GAGGAG | 7 cut(s) | 18, 40, 179, 1228, 1378, 1636, 2450 |
| BseSI | GKGCMC | 1 cut(s) | 2371 |
| BseXI | GCAGC | 9 cut(s) | 119, 166, 193, 239, 286, 1038, 1321, 1474, 2489 |
| BsgI | GTGCAG | 1 cut(s) | 1037 |
| BshFI | GGCC | 5 cut(s) | 480, 1523, 1570, 1775, 2336 |
| BshVI | ATCGAT | 1 cut(s) | 992 |
| BsiHKAI | GWGCWC | 2 cut(s) | 50, 2371 |
| BsiSI | CCGG | 1 cut(s) | 399 |
| BslFI | GGGAC | 3 cut(s) | 637, 1421, 1571 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 286, 984 |
| BsmAI | GTCTC | 1 cut(s) | 970 |
| BsmFI | GGGAC | 3 cut(s) | 637, 1421, 1571 |
| BsmI | GAATGC | 3 cut(s) | 2100, 2272, 2458 |
| BsnI | GGCC | 5 cut(s) | 480, 1523, 1570, 1775, 2336 |
| Bsp1286I | GDGCHC | 2 cut(s) | 50, 2371 |
| Bsp1407I | TGTACA | 1 cut(s) | 1993 |
| BspACI | CCGC | 2 cut(s) | 315, 739 |
| BspANI | GGCC | 5 cut(s) | 480, 1523, 1570, 1775, 2336 |
| BspCNI | CTCAG | 5 cut(s) | 102, 222, 623, 1611, 2077 |
| BspDI | ATCGAT | 1 cut(s) | 992 |
| BspHI | TCATGA | 3 cut(s) | 463, 589, 1746 |
| BspLI | GGNNCC | 4 cut(s) | 291, 479, 1845, 2298 |
| BspMI | ACCTGC | 1 cut(s) | 2380 |
| BspOI | GCTAGC | 1 cut(s) | 2222 |
| BspPI | GGATC | 6 cut(s) | 554, 680, 1070, 1733, 2291, 2304 |
| BspTI | CTTAAG | 1 cut(s) | 944 |
| BsrDI | GCAATG | 1 cut(s) | 1884 |
| BsrFI | RCCGGY | 1 cut(s) | 398 |
| BsrGI | TGTACA | 1 cut(s) | 1993 |
| BsrI | ACTGG | 6 cut(s) | 107, 227, 736, 1086, 1912, 2524 |
| BssAI | RCCGGY | 1 cut(s) | 398 |
| BssECI | CCNNGG | 2 cut(s) | 51, 2464 |
| BssT1I | CCWWGG | 1 cut(s) | 2464 |
| Bst2UI | CCWGG | 1 cut(s) | 877 |
| Bst4CI | ACNGT | 6 cut(s) | 1168, 1307, 1349, 1416, 1993, 2329 |
| Bst6I | CTCTTC | 5 cut(s) | 331, 749, 1205, 1521, 1917 |
| BstAFI | CTTAAG | 1 cut(s) | 944 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 654 |
| BstAUI | TGTACA | 1 cut(s) | 1993 |
| BstC8I | GCNNGC | 4 cut(s) | 498, 899, 1897, 2220 |
| BstDEI | CTNAG | 8 cut(s) | 89, 209, 610, 891, 1619, 1649, 2085, 2278 |
| BstF5I | GGATG | 6 cut(s) | 799, 1330, 1450, 1600, 2029, 2085 |
| BstH2I | RGCGCY | 2 cut(s) | 160, 187 |
| BstHHI | GCGC | 3 cut(s) | 159, 186, 1027 |
| BstMAI | GTCTC | 1 cut(s) | 970 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 296, 360, 433, 654, 1901 |
| BstNI | CCWGG | 1 cut(s) | 877 |
| BstNSI | RCATGY | 1 cut(s) | 410 |
| BstSCI | CCNGG | 1 cut(s) | 875 |
| BstSLI | GKGCMC | 1 cut(s) | 2371 |
| BstV1I | GCAGC | 9 cut(s) | 119, 166, 193, 239, 286, 1038, 1321, 1474, 2489 |
| BstV2I | GAAGAC | 1 cut(s) | 2138 |
| BstX2I | RGATCY | 2 cut(s) | 1738, 2296 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1192 |
| BstYI | RGATCY | 2 cut(s) | 1738, 2296 |
| Bsu15I | ATCGAT | 1 cut(s) | 992 |
| BsuI | GTATCC | 1 cut(s) | 728 |
| BsuRI | GGCC | 5 cut(s) | 480, 1523, 1570, 1775, 2336 |
| BsuTUI | ATCGAT | 1 cut(s) | 992 |
| BtsCI | GGATG | 6 cut(s) | 799, 1330, 1450, 1600, 2029, 2085 |
| BtsI | GCAGTG | 2 cut(s) | 1130, 1142 |
| BtsIMutI | CAGTG | 5 cut(s) | 729, 869, 1130, 1142, 1421 |
| BveI | ACCTGC | 1 cut(s) | 2380 |
| Cac8I | GCNNGC | 4 cut(s) | 498, 899, 1897, 2220 |
| CciI | TCATGA | 3 cut(s) | 463, 589, 1746 |
| CfoI | GCGC | 3 cut(s) | 159, 186, 1027 |
| Cfr10I | RCCGGY | 1 cut(s) | 398 |
| Cfr13I | GGNCC | 5 cut(s) | 478, 1568, 1843, 2041, 2335 |
| ClaI | ATCGAT | 1 cut(s) | 992 |
| Csp6I | GTAC | 2 cut(s) | 910, 1994 |
| CviQI | GTAC | 2 cut(s) | 910, 1994 |
| DdeI | CTNAG | 8 cut(s) | 89, 209, 610, 891, 1619, 1649, 2085, 2278 |
| DraI | TTTAAA | 1 cut(s) | 1932 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 962 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 962 |
| EaeI | YGGCCR | 1 cut(s) | 1521 |
| Eam1104I | CTCTTC | 5 cut(s) | 331, 749, 1205, 1521, 1917 |
| EarI | CTCTTC | 5 cut(s) | 331, 749, 1205, 1521, 1917 |
| Eco130I | CCWWGG | 1 cut(s) | 2464 |
| Eco47I | GGWCC | 2 cut(s) | 1843, 2041 |
| Eco57I | CTGAAG | 1 cut(s) | 2244 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2041, 2335 |
| EcoRII | CCWGG | 1 cut(s) | 875 |
| EcoT14I | CCWWGG | 1 cut(s) | 2464 |
| EcoT22I | ATGCAT | 1 cut(s) | 2102 |
| ErhI | CCWWGG | 1 cut(s) | 2464 |
| FaqI | GGGAC | 3 cut(s) | 637, 1421, 1571 |
| FbaI | TGATCA | 3 cut(s) | 783, 1449, 2116 |
| FblI | GTMKAC | 4 cut(s) | 80, 200, 266, 1808 |
| Fnu4HI | GCNGC | 9 cut(s) | 108, 155, 182, 228, 275, 1052, 1335, 1488, 2478 |
| FokI | GGATG | 6 cut(s) | 806, 1337, 1457, 1607, 2036, 2092 |
| Fsp4HI | GCNGC | 9 cut(s) | 108, 155, 182, 228, 275, 1052, 1335, 1488, 2478 |
| FspBI | CTAG | 9 cut(s) | 627, 902, 1179, 1409, 1455, 1901, 2070, 2219, 2286 |
| FspI | TGCGCA | 1 cut(s) | 1026 |
| GlaI | GCGC | 3 cut(s) | 158, 185, 1026 |
| GluI | GCNGC | 9 cut(s) | 108, 155, 182, 228, 275, 1052, 1335, 1488, 2478 |
| HaeII | RGCGCY | 2 cut(s) | 160, 187 |
| HaeIII | GGCC | 5 cut(s) | 480, 1523, 1570, 1775, 2336 |
| HapII | CCGG | 1 cut(s) | 399 |
| HhaI | GCGC | 3 cut(s) | 159, 186, 1027 |
| Hin6I | GCGC | 3 cut(s) | 157, 184, 1025 |
| HinP1I | GCGC | 3 cut(s) | 157, 184, 1025 |
| HincII | GTYRAC | 4 cut(s) | 81, 201, 267, 1506 |
| HindII | GTYRAC | 4 cut(s) | 81, 201, 267, 1506 |
| HindIII | AAGCTT | 1 cut(s) | 1856 |
| HpaII | CCGG | 1 cut(s) | 399 |
| HphI | GGTGA | 5 cut(s) | 132, 563, 964, 1030, 1075 |
| Hpy166II | GTNNAC | 8 cut(s) | 81, 201, 267, 404, 1171, 1506, 1809, 2369 |
| Hpy8I | GTNNAC | 8 cut(s) | 81, 201, 267, 404, 1171, 1506, 1809, 2369 |
| Hpy99I | CGWCG | 4 cut(s) | 82, 202, 265, 268 |
| HpyAV | CCTTC | 9 cut(s) | 25, 450, 461, 814, 916, 1294, 1306, 1765, 2176 |
| HpyCH4III | ACNGT | 6 cut(s) | 1168, 1307, 1349, 1416, 1993, 2329 |
| HpyCH4IV | ACGT | 1 cut(s) | 2424 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 296, 360, 433, 654, 1901 |
| HpyF3I | CTNAG | 8 cut(s) | 89, 209, 610, 891, 1619, 1649, 2085, 2278 |
| HpySE526I | ACGT | 1 cut(s) | 2424 |
| HspAI | GCGC | 3 cut(s) | 157, 184, 1025 |
| Ksp22I | TGATCA | 3 cut(s) | 783, 1449, 2116 |
| LmnI | GCTCC | 5 cut(s) | 53, 295, 635, 1984, 2437 |
| Lsp1109I | GCAGC | 9 cut(s) | 119, 166, 193, 239, 286, 1038, 1321, 1474, 2489 |
| LweI | GCATC | 1 cut(s) | 1585 |
| MaeI | CTAG | 9 cut(s) | 627, 902, 1179, 1409, 1455, 1901, 2070, 2219, 2286 |
| MaeII | ACGT | 1 cut(s) | 2424 |
| MaeIII | GTNAC | 8 cut(s) | 578, 953, 970, 1018, 1088, 1226, 1277, 2495 |
| MflI | RGATCY | 2 cut(s) | 1738, 2296 |
| MhlI | GDGCHC | 2 cut(s) | 50, 2371 |
| MmeI | TCCRAC | 4 cut(s) | 1299, 1422, 1598, 2423 |
| Mph1103I | ATGCAT | 1 cut(s) | 2102 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2270 |
| MseI | TTAA | 6 cut(s) | 945, 1245, 1512, 1890, 1931, 2360 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1016 |
| MspCI | CTTAAG | 1 cut(s) | 944 |
| MspI | CCGG | 1 cut(s) | 399 |
| MspR9I | CCNGG | 1 cut(s) | 877 |
| Mva1269I | GAATGC | 3 cut(s) | 2100, 2272, 2458 |
| MvaI | CCWGG | 1 cut(s) | 877 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 296, 360, 433, 654, 1901 |
| NheI | GCTAGC | 1 cut(s) | 2218 |
| NlaIV | GGNNCC | 4 cut(s) | 291, 479, 1845, 2298 |
| NmeAIII | GCCGAG | 5 cut(s) | 32, 130, 157, 250, 266 |
| NmuCI | GTSAC | 5 cut(s) | 953, 970, 1018, 1088, 1277 |
| NsbI | TGCGCA | 1 cut(s) | 1026 |
| NsiI | ATGCAT | 1 cut(s) | 2102 |
| NspI | RCATGY | 1 cut(s) | 410 |
| PagI | TCATGA | 3 cut(s) | 463, 589, 1746 |
| PaqCI | CACCTGC | 1 cut(s) | 2380 |
| PctI | GAATGC | 3 cut(s) | 2100, 2272, 2458 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2270 |
| PfeI | GAWTC | 5 cut(s) | 5, 309, 828, 994, 2192 |
| PkrI | GCNGC | 9 cut(s) | 109, 156, 183, 229, 276, 1053, 1336, 1489, 2479 |
| PpuMI | RGGWCCY | 1 cut(s) | 2041 |
| PshBI | ATTAAT | 1 cut(s) | 1890 |
| Psp5II | RGGWCCY | 1 cut(s) | 2041 |
| Psp6I | CCWGG | 1 cut(s) | 875 |
| PspGI | CCWGG | 1 cut(s) | 875 |
| PspN4I | GGNNCC | 4 cut(s) | 291, 479, 1845, 2298 |
| PspPI | GGNCC | 5 cut(s) | 478, 1568, 1843, 2041, 2335 |
| PspPPI | RGGWCCY | 1 cut(s) | 2041 |
| PsuI | RGATCY | 2 cut(s) | 1738, 2296 |
| RsaI | GTAC | 2 cut(s) | 911, 1995 |
| RsaNI | GTAC | 2 cut(s) | 910, 1994 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SalI | GTCGAC | 3 cut(s) | 79, 199, 265 |
| SaqAI | TTAA | 6 cut(s) | 945, 1245, 1512, 1890, 1931, 2360 |
| SatI | GCNGC | 9 cut(s) | 108, 155, 182, 228, 275, 1052, 1335, 1488, 2478 |
| Sau96I | GGNCC | 5 cut(s) | 478, 1568, 1843, 2041, 2335 |
| ScrFI | CCNGG | 1 cut(s) | 877 |
| SduI | GDGCHC | 2 cut(s) | 50, 2371 |
| SfaNI | GCATC | 1 cut(s) | 1585 |
| SinI | GGWCC | 2 cut(s) | 1843, 2041 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1016 |
| SmlI | CTYRAG | 3 cut(s) | 944, 1118, 2441 |
| SmoI | CTYRAG | 3 cut(s) | 944, 1118, 2441 |
| SsiI | CCGC | 2 cut(s) | 315, 739 |
| SspI | AATATT | 1 cut(s) | 1941 |
| SspMI | CTAG | 9 cut(s) | 627, 902, 1179, 1409, 1455, 1901, 2070, 2219, 2286 |
| StyD4I | CCNGG | 1 cut(s) | 875 |
| StyI | CCWWGG | 1 cut(s) | 2464 |
| TaaI | ACNGT | 6 cut(s) | 1168, 1307, 1349, 1416, 1993, 2329 |
| TaiI | ACGT | 1 cut(s) | 2427 |
| TatI | WGTACW | 2 cut(s) | 909, 1993 |
| TfiI | GAWTC | 5 cut(s) | 5, 309, 828, 994, 2192 |
| Tru1I | TTAA | 6 cut(s) | 945, 1245, 1512, 1890, 1931, 2360 |
| Tru9I | TTAA | 6 cut(s) | 945, 1245, 1512, 1890, 1931, 2360 |
| TscAI | CASTG | 5 cut(s) | 736, 876, 1130, 1142, 1421 |
| TseFI | GTSAC | 5 cut(s) | 953, 970, 1018, 1088, 1277 |
| TseI | GCWGC | 9 cut(s) | 107, 154, 181, 227, 274, 1051, 1334, 1487, 2477 |
| Tsp45I | GTSAC | 5 cut(s) | 953, 970, 1018, 1088, 1277 |
| TspGWI | ACGGA | 2 cut(s) | 282, 2185 |
| TspRI | CASTG | 5 cut(s) | 736, 876, 1130, 1142, 1421 |
| Vha464I | CTTAAG | 1 cut(s) | 944 |
| VneI | GTGCAC | 1 cut(s) | 2367 |
| VpaK11BI | GGWCC | 2 cut(s) | 1843, 2041 |
| VspI | ATTAAT | 1 cut(s) | 1890 |
| XapI | RAATTY | 3 cut(s) | 1778, 2377, 2418 |
| XbaI | TCTAGA | 2 cut(s) | 1408, 2285 |
| XceI | RCATGY | 1 cut(s) | 410 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1438 |
| XmiI | GTMKAC | 4 cut(s) | 80, 200, 266, 1808 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2270 |
| XspI | CTAG | 9 cut(s) | 627, 902, 1179, 1409, 1455, 1901, 2070, 2219, 2286 |
| Zsp2I | ATGCAT | 1 cut(s) | 2102 |