Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 19 - 96 | 1.4e-09 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 475 |
| AclWI | GGATC | 2 cut(s) | 138, 161 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AgeI | ACCGGT | 1 cut(s) | 359 |
| AgsI | TTSAA | 4 cut(s) | 127, 178, 205, 333 |
| AluBI | AGCT | 6 cut(s) | 22, 123, 181, 253, 284, 522 |
| AluI | AGCT | 6 cut(s) | 22, 123, 181, 253, 284, 522 |
| AlwI | GGATC | 2 cut(s) | 138, 161 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| AsiGI | ACCGGT | 1 cut(s) | 359 |
| BccI | CCATC | 1 cut(s) | 478 |
| BclI | TGATCA | 1 cut(s) | 220 |
| BmsI | GCATC | 2 cut(s) | 289, 386 |
| Bpu10I | CCTNAGC | 1 cut(s) | 254 |
| BpuEI | CTTGAG | 2 cut(s) | 406, 490 |
| BsaBI | GATNNNNATC | 1 cut(s) | 135 |
| BsaWI | WCCGGW | 1 cut(s) | 359 |
| Bse118I | RCCGGY | 1 cut(s) | 359 |
| Bse8I | GATNNNNATC | 1 cut(s) | 135 |
| BseGI | GGATG | 1 cut(s) | 304 |
| BseJI | GATNNNNATC | 1 cut(s) | 135 |
| BseMII | CTCAG | 1 cut(s) | 51 |
| BshTI | ACCGGT | 1 cut(s) | 359 |
| BsiSI | CCGG | 1 cut(s) | 360 |
| Bsp143I | GATC | 3 cut(s) | 130, 166, 220 |
| BspCNI | CTCAG | 1 cut(s) | 52 |
| BspHI | TCATGA | 1 cut(s) | 223 |
| BspPI | GGATC | 2 cut(s) | 138, 161 |
| BspQI | GCTCTTC | 1 cut(s) | 367 |
| BsrFI | RCCGGY | 1 cut(s) | 359 |
| BssAI | RCCGGY | 1 cut(s) | 359 |
| BssMI | GATC | 3 cut(s) | 130, 166, 220 |
| BssNAI | GTATAC | 1 cut(s) | 476 |
| Bst1107I | GTATAC | 1 cut(s) | 476 |
| Bst4CI | ACNGT | 1 cut(s) | 349 |
| Bst6I | CTCTTC | 1 cut(s) | 367 |
| BstDEI | CTNAG | 2 cut(s) | 60, 254 |
| BstF5I | GGATG | 1 cut(s) | 304 |
| BstKTI | GATC | 3 cut(s) | 133, 169, 223 |
| BstMBI | GATC | 3 cut(s) | 130, 166, 220 |
| BstX2I | RGATCY | 1 cut(s) | 130 |
| BstYI | RGATCY | 1 cut(s) | 130 |
| BstZ17I | GTATAC | 1 cut(s) | 476 |
| BtsCI | GGATG | 1 cut(s) | 304 |
| CciI | TCATGA | 1 cut(s) | 223 |
| Cfr10I | RCCGGY | 1 cut(s) | 359 |
| CspAI | ACCGGT | 1 cut(s) | 359 |
| CviAII | CATG | 2 cut(s) | 91, 224 |
| CviJI | RGCY | 7 cut(s) | 22, 123, 157, 181, 253, 284, 522 |
| CviKI_1 | RGCY | 7 cut(s) | 22, 123, 157, 181, 253, 284, 522 |
| DdeI | CTNAG | 2 cut(s) | 60, 254 |
| DpnI | GATC | 3 cut(s) | 132, 168, 222 |
| DpnII | GATC | 3 cut(s) | 130, 166, 220 |
| Eam1104I | CTCTTC | 1 cut(s) | 367 |
| EarI | CTCTTC | 1 cut(s) | 367 |
| Eco32I | GATATC | 1 cut(s) | 13 |
| EcoRV | GATATC | 1 cut(s) | 13 |
| FaeI | CATG | 2 cut(s) | 94, 227 |
| FatI | CATG | 2 cut(s) | 90, 223 |
| FbaI | TGATCA | 1 cut(s) | 220 |
| FblI | GTMKAC | 1 cut(s) | 475 |
| FokI | GGATG | 1 cut(s) | 311 |
| HapII | CCGG | 1 cut(s) | 360 |
| Hin1II | CATG | 2 cut(s) | 94, 227 |
| HincII | GTYRAC | 1 cut(s) | 72 |
| HindII | GTYRAC | 1 cut(s) | 72 |
| HindIII | AAGCTT | 1 cut(s) | 282 |
| HinfI | GANTC | 2 cut(s) | 174, 490 |
| HpaII | CCGG | 1 cut(s) | 360 |
| Hpy166II | GTNNAC | 4 cut(s) | 72, 338, 447, 476 |
| Hpy188I | TCNGA | 3 cut(s) | 171, 412, 495 |
| Hpy188III | TCNNGA | 3 cut(s) | 224, 385, 469 |
| Hpy8I | GTNNAC | 4 cut(s) | 72, 338, 447, 476 |
| HpyAV | CCTTC | 1 cut(s) | 434 |
| HpyCH4III | ACNGT | 1 cut(s) | 349 |
| HpyCH4V | TGCA | 4 cut(s) | 32, 43, 290, 434 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 254 |
| Hsp92II | CATG | 2 cut(s) | 94, 227 |
| Ksp22I | TGATCA | 1 cut(s) | 220 |
| Kzo9I | GATC | 3 cut(s) | 130, 166, 220 |
| LguI | GCTCTTC | 1 cut(s) | 367 |
| LmnI | GCTCC | 1 cut(s) | 250 |
| LpnPI | CCDG | 5 cut(s) | 33, 48, 69, 373, 445 |
| LweI | GCATC | 2 cut(s) | 289, 386 |
| MaeIII | GTNAC | 1 cut(s) | 349 |
| MalI | GATC | 3 cut(s) | 132, 168, 222 |
| MboI | GATC | 3 cut(s) | 130, 166, 220 |
| MboII | GAAGA | 2 cut(s) | 321, 384 |
| MflI | RGATCY | 1 cut(s) | 130 |
| MluCI | AATT | 3 cut(s) | 6, 101, 503 |
| MnlI | CCTC | 3 cut(s) | 205, 313, 362 |
| MseI | TTAA | 1 cut(s) | 186 |
| MspI | CCGG | 1 cut(s) | 360 |
| NdeII | GATC | 3 cut(s) | 130, 166, 220 |
| NlaIII | CATG | 2 cut(s) | 94, 227 |
| PagI | TCATGA | 1 cut(s) | 223 |
| PciSI | GCTCTTC | 1 cut(s) | 367 |
| PfeI | GAWTC | 2 cut(s) | 174, 490 |
| PinAI | ACCGGT | 1 cut(s) | 359 |
| PsuI | RGATCY | 1 cut(s) | 130 |
| SapI | GCTCTTC | 1 cut(s) | 367 |
| SaqAI | TTAA | 1 cut(s) | 186 |
| Sau3AI | GATC | 3 cut(s) | 130, 166, 220 |
| SetI | ASST | 8 cut(s) | 24, 37, 125, 183, 255, 286, 324, 524 |
| SfaNI | GCATC | 2 cut(s) | 289, 386 |
| SmlI | CTYRAG | 2 cut(s) | 385, 469 |
| SmoI | CTYRAG | 2 cut(s) | 385, 469 |
| Sse9I | AATT | 3 cut(s) | 6, 101, 503 |
| SspI | AATATT | 1 cut(s) | 113 |
| TaaI | ACNGT | 1 cut(s) | 349 |
| TasI | AATT | 3 cut(s) | 6, 101, 503 |
| TfiI | GAWTC | 2 cut(s) | 174, 490 |
| Tru1I | TTAA | 1 cut(s) | 186 |
| Tru9I | TTAA | 1 cut(s) | 186 |
| TspDTI | ATGAA | 1 cut(s) | 294 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 509 |
| XmiI | GTMKAC | 1 cut(s) | 475 |