Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 6 - 87 | 8.3e-12 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 281 |
| AccBSI | CCGCTC | 1 cut(s) | 211 |
| AciI | CCGC | 1 cut(s) | 211 |
| AclWI | GGATC | 2 cut(s) | 134, 468 |
| AcsI | RAATTY | 3 cut(s) | 74, 266, 380 |
| AfaI | GTAC | 2 cut(s) | 86, 260 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 281 |
| AgsI | TTSAA | 2 cut(s) | 56, 368 |
| AluBI | AGCT | 5 cut(s) | 70, 115, 235, 302, 401 |
| AluI | AGCT | 5 cut(s) | 70, 115, 235, 302, 401 |
| AlwI | GGATC | 2 cut(s) | 134, 468 |
| ApoI | RAATTY | 3 cut(s) | 74, 266, 380 |
| AsuC2I | CCSGG | 1 cut(s) | 362 |
| AsuHPI | GGTGA | 1 cut(s) | 481 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 143, 175 |
| BauI | CACGAG | 1 cut(s) | 464 |
| BbvCI | CCTCAGC | 1 cut(s) | 450 |
| BccI | CCATC | 1 cut(s) | 323 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 317, 351, 445, 479 |
| BcnI | CCSGG | 1 cut(s) | 362 |
| BmcAI | AGTACT | 1 cut(s) | 86 |
| Bme1390I | CCNGG | 1 cut(s) | 362 |
| BmrFI | CCNGG | 1 cut(s) | 362 |
| BmrI | ACTGGG | 1 cut(s) | 97 |
| BmsI | GCATC | 2 cut(s) | 25, 519 |
| BmuI | ACTGGG | 1 cut(s) | 97 |
| Bpu10I | CCTNAGC | 1 cut(s) | 450 |
| BpuEI | CTTGAG | 1 cut(s) | 207 |
| BpuMI | CCSGG | 1 cut(s) | 362 |
| Bsa29I | ATCGAT | 2 cut(s) | 180, 327 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 281 |
| Bse1I | ACTGG | 1 cut(s) | 92 |
| Bse3DI | GCAATG | 1 cut(s) | 492 |
| BseCI | ATCGAT | 2 cut(s) | 180, 327 |
| BseGI | GGATG | 1 cut(s) | 40 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseMI | GCAATG | 1 cut(s) | 492 |
| BseMII | CTCAG | 1 cut(s) | 441 |
| BseNI | ACTGG | 1 cut(s) | 92 |
| BseRI | GAGGAG | 1 cut(s) | 44 |
| BshVI | ATCGAT | 2 cut(s) | 180, 327 |
| BsiSI | CCGG | 1 cut(s) | 361 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 281 |
| Bsp143I | GATC | 2 cut(s) | 139, 460 |
| BspACI | CCGC | 1 cut(s) | 211 |
| BspCNI | CTCAG | 1 cut(s) | 442 |
| BspDI | ATCGAT | 2 cut(s) | 180, 327 |
| BspHI | TCATGA | 1 cut(s) | 136 |
| BspPI | GGATC | 2 cut(s) | 134, 468 |
| BsrBI | CCGCTC | 1 cut(s) | 211 |
| BsrDI | GCAATG | 1 cut(s) | 492 |
| BsrI | ACTGG | 1 cut(s) | 92 |
| BssMI | GATC | 2 cut(s) | 139, 460 |
| BssSI | CACGAG | 1 cut(s) | 464 |
| Bst2BI | CACGAG | 1 cut(s) | 464 |
| Bst4CI | ACNGT | 1 cut(s) | 475 |
| BstC8I | GCNNGC | 1 cut(s) | 16 |
| BstDEI | CTNAG | 3 cut(s) | 192, 402, 450 |
| BstF5I | GGATG | 1 cut(s) | 40 |
| BstKTI | GATC | 2 cut(s) | 142, 463 |
| BstMBI | GATC | 2 cut(s) | 139, 460 |
| BstSCI | CCNGG | 1 cut(s) | 360 |
| BstX2I | RGATCY | 1 cut(s) | 460 |
| BstYI | RGATCY | 1 cut(s) | 460 |
| Bsu15I | ATCGAT | 2 cut(s) | 180, 327 |
| BsuTUI | ATCGAT | 2 cut(s) | 180, 327 |
| BtsCI | GGATG | 1 cut(s) | 40 |
| Cac8I | GCNNGC | 1 cut(s) | 16 |
| CciI | TCATGA | 1 cut(s) | 136 |
| ClaI | ATCGAT | 2 cut(s) | 180, 327 |
| Csp6I | GTAC | 2 cut(s) | 85, 259 |
| CviAII | CATG | 2 cut(s) | 137, 295 |
| CviJI | RGCY | 8 cut(s) | 70, 115, 128, 235, 302, 346, 373, 401 |
| CviKI_1 | RGCY | 8 cut(s) | 70, 115, 128, 235, 302, 346, 373, 401 |
| CviQI | GTAC | 2 cut(s) | 85, 259 |
| DdeI | CTNAG | 3 cut(s) | 192, 402, 450 |
| DpnI | GATC | 2 cut(s) | 141, 462 |
| DpnII | GATC | 2 cut(s) | 139, 460 |
| FaeI | CATG | 2 cut(s) | 140, 298 |
| FatI | CATG | 2 cut(s) | 136, 294 |
| FokI | GGATG | 1 cut(s) | 47 |
| HapII | CCGG | 1 cut(s) | 361 |
| Hin1II | CATG | 2 cut(s) | 140, 298 |
| HinfI | GANTC | 1 cut(s) | 305 |
| HpaII | CCGG | 1 cut(s) | 361 |
| HphI | GGTGA | 1 cut(s) | 481 |
| Hpy166II | GTNNAC | 1 cut(s) | 433 |
| Hpy188III | TCNNGA | 1 cut(s) | 137 |
| Hpy8I | GTNNAC | 1 cut(s) | 433 |
| HpyCH4III | ACNGT | 1 cut(s) | 475 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 14, 38, 389, 485, 501 |
| HpyF3I | CTNAG | 3 cut(s) | 192, 402, 450 |
| Hsp92II | CATG | 2 cut(s) | 140, 298 |
| Kzo9I | GATC | 2 cut(s) | 139, 460 |
| LpnPI | CCDG | 5 cut(s) | 73, 263, 374, 509, 520 |
| LweI | GCATC | 2 cut(s) | 25, 519 |
| MaeIII | GTNAC | 1 cut(s) | 469 |
| MalI | GATC | 2 cut(s) | 141, 462 |
| MbiI | CCGCTC | 1 cut(s) | 211 |
| MboI | GATC | 2 cut(s) | 139, 460 |
| MboII | GAAGA | 1 cut(s) | 210 |
| MflI | RGATCY | 1 cut(s) | 460 |
| MluCI | AATT | 3 cut(s) | 74, 266, 380 |
| MmeI | TCCRAC | 1 cut(s) | 128 |
| MnlI | CCTC | 8 cut(s) | 22, 25, 43, 193, 387, 421, 433, 445 |
| MseI | TTAA | 3 cut(s) | 21, 228, 521 |
| MspI | CCGG | 1 cut(s) | 361 |
| MspR9I | CCNGG | 1 cut(s) | 362 |
| NciI | CCSGG | 1 cut(s) | 362 |
| NdeII | GATC | 2 cut(s) | 139, 460 |
| NlaIII | CATG | 2 cut(s) | 140, 298 |
| NmuCI | GTSAC | 1 cut(s) | 469 |
| PagI | TCATGA | 1 cut(s) | 136 |
| PfeI | GAWTC | 1 cut(s) | 305 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 281 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 117, 149 |
| PsuI | RGATCY | 1 cut(s) | 460 |
| RsaI | GTAC | 2 cut(s) | 86, 260 |
| RsaNI | GTAC | 2 cut(s) | 85, 259 |
| SaqAI | TTAA | 3 cut(s) | 21, 228, 521 |
| Sau3AI | GATC | 2 cut(s) | 139, 460 |
| ScaI | AGTACT | 1 cut(s) | 86 |
| ScrFI | CCNGG | 1 cut(s) | 362 |
| SfaNI | GCATC | 2 cut(s) | 25, 519 |
| SmlI | CTYRAG | 1 cut(s) | 222 |
| SmoI | CTYRAG | 1 cut(s) | 222 |
| Sse9I | AATT | 3 cut(s) | 74, 266, 380 |
| SsiI | CCGC | 1 cut(s) | 211 |
| StyD4I | CCNGG | 1 cut(s) | 360 |
| TaaI | ACNGT | 1 cut(s) | 475 |
| TaqI | TCGA | 2 cut(s) | 180, 327 |
| TasI | AATT | 3 cut(s) | 74, 266, 380 |
| TatI | WGTACW | 2 cut(s) | 84, 258 |
| TfiI | GAWTC | 1 cut(s) | 305 |
| Tru1I | TTAA | 3 cut(s) | 21, 228, 521 |
| Tru9I | TTAA | 3 cut(s) | 21, 228, 521 |
| TseFI | GTSAC | 1 cut(s) | 469 |
| Tsp45I | GTSAC | 1 cut(s) | 469 |
| TspDTI | ATGAA | 2 cut(s) | 80, 125 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 281 |
| XapI | RAATTY | 3 cut(s) | 74, 266, 380 |
| ZrmI | AGTACT | 1 cut(s) | 86 |