protein dimerization activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 6 cut(s) | 83, 96, 401, 413, 569, 644 |
| AcoI | YGGCCR | 1 cut(s) | 498 |
| AcsI | RAATTY | 2 cut(s) | 109, 692 |
| AcuI | CTGAAG | 3 cut(s) | 447, 702, 798 |
| AfaI | GTAC | 8 cut(s) | 35, 98, 121, 298, 479, 529, 556, 668 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 236 |
| AflIII | ACRYGT | 1 cut(s) | 327 |
| AgsI | TTSAA | 4 cut(s) | 42, 222, 416, 591 |
| AhlI | ACTAGT | 1 cut(s) | 266 |
| AluBI | AGCT | 7 cut(s) | 20, 46, 64, 77, 103, 199, 291 |
| AluI | AGCT | 7 cut(s) | 20, 46, 64, 77, 103, 199, 291 |
| AlwI | GGATC | 6 cut(s) | 83, 96, 401, 413, 569, 644 |
| AoxI | GGCC | 1 cut(s) | 498 |
| ApeKI | GCWGC | 4 cut(s) | 196, 288, 776, 803 |
| ApoI | RAATTY | 2 cut(s) | 109, 692 |
| AspA2I | CCTAGG | 1 cut(s) | 92 |
| AspS9I | GGNCC | 2 cut(s) | 227, 303 |
| AsuII | TTCGAA | 1 cut(s) | 690 |
| AvaII | GGWCC | 2 cut(s) | 227, 303 |
| AvrII | CCTAGG | 1 cut(s) | 92 |
| BalI | TGGCCA | 1 cut(s) | 500 |
| BamHI | GGATCC | 1 cut(s) | 88 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 520, 552 |
| BbvI | GCAGC | 4 cut(s) | 208, 300, 763, 815 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 782, 816 |
| BciVI | GTATCC | 1 cut(s) | 724 |
| BcuI | ACTAGT | 1 cut(s) | 266 |
| BfaI | CTAG | 5 cut(s) | 47, 93, 267, 294, 648 |
| BfmI | CTRYAG | 1 cut(s) | 580 |
| BfuI | GTATCC | 1 cut(s) | 724 |
| BisI | GCNGC | 4 cut(s) | 197, 289, 777, 804 |
| BlnI | CCTAGG | 1 cut(s) | 92 |
| BlsI | GCNGC | 4 cut(s) | 198, 290, 778, 805 |
| BmcAI | AGTACT | 5 cut(s) | 35, 121, 529, 556, 668 |
| Bme18I | GGWCC | 2 cut(s) | 227, 303 |
| BmgT120I | GGNCC | 2 cut(s) | 227, 303 |
| BmiI | GGNNCC | 2 cut(s) | 90, 283 |
| BmsI | GCATC | 3 cut(s) | 176, 224, 790 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 104 |
| Bpu14I | TTCGAA | 1 cut(s) | 690 |
| BpuEI | CTTGAG | 2 cut(s) | 724, 746 |
| BsaBI | GATNNNNATC | 1 cut(s) | 788 |
| BsaJI | CCNNGG | 1 cut(s) | 92 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 552, 582 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 236 |
| Bse1I | ACTGG | 1 cut(s) | 562 |
| Bse3DI | GCAATG | 1 cut(s) | 813 |
| Bse8I | GATNNNNATC | 1 cut(s) | 788 |
| BseDI | CCNNGG | 1 cut(s) | 92 |
| BseJI | GATNNNNATC | 1 cut(s) | 788 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BseMI | GCAATG | 1 cut(s) | 813 |
| BseMII | CTCAG | 1 cut(s) | 245 |
| BseNI | ACTGG | 1 cut(s) | 562 |
| BseRI | GAGGAG | 1 cut(s) | 449 |
| BseXI | GCAGC | 4 cut(s) | 208, 300, 763, 815 |
| BsgI | GTGCAG | 1 cut(s) | 215 |
| BshFI | GGCC | 1 cut(s) | 500 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 236 |
| BsnI | GGCC | 1 cut(s) | 500 |
| Bsp119I | TTCGAA | 1 cut(s) | 690 |
| Bsp143I | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| BspANI | GGCC | 1 cut(s) | 500 |
| BspCNI | CTCAG | 1 cut(s) | 244 |
| BspLI | GGNNCC | 2 cut(s) | 90, 283 |
| BspPI | GGATC | 6 cut(s) | 83, 96, 401, 413, 569, 644 |
| BspT104I | TTCGAA | 1 cut(s) | 690 |
| BsrDI | GCAATG | 1 cut(s) | 813 |
| BsrI | ACTGG | 1 cut(s) | 562 |
| BssECI | CCNNGG | 1 cut(s) | 92 |
| BssMI | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| BssT1I | CCWWGG | 1 cut(s) | 92 |
| Bst4CI | ACNGT | 2 cut(s) | 532, 607 |
| Bst6I | CTCTTC | 3 cut(s) | 360, 426, 678 |
| BstBI | TTCGAA | 1 cut(s) | 690 |
| BstC8I | GCNNGC | 2 cut(s) | 513, 626 |
| BstDEI | CTNAG | 3 cut(s) | 21, 104, 231 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 234 |
| BstKTI | GATC | 5 cut(s) | 91, 409, 421, 577, 639 |
| BstMBI | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 809 |
| BstNSI | RCATGY | 2 cut(s) | 331, 628 |
| BstSFI | CTRYAG | 1 cut(s) | 580 |
| BstV1I | GCAGC | 4 cut(s) | 208, 300, 763, 815 |
| BstX2I | RGATCY | 2 cut(s) | 88, 418 |
| BstYI | RGATCY | 2 cut(s) | 88, 418 |
| BsuI | GTATCC | 1 cut(s) | 724 |
| BsuRI | GGCC | 1 cut(s) | 500 |
| BtsI | GCAGTG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 1 cut(s) | 12 |
| Cac8I | GCNNGC | 2 cut(s) | 513, 626 |
| Cfr13I | GGNCC | 2 cut(s) | 227, 303 |
| Csp6I | GTAC | 8 cut(s) | 34, 97, 120, 297, 478, 528, 555, 667 |
| CviAII | CATG | 4 cut(s) | 55, 328, 383, 625 |
| CviQI | GTAC | 8 cut(s) | 34, 97, 120, 297, 478, 528, 555, 667 |
| DdeI | CTNAG | 3 cut(s) | 21, 104, 231 |
| DpnI | GATC | 5 cut(s) | 90, 408, 420, 576, 638 |
| DpnII | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| EaeI | YGGCCR | 1 cut(s) | 498 |
| Eam1104I | CTCTTC | 3 cut(s) | 360, 426, 678 |
| EarI | CTCTTC | 3 cut(s) | 360, 426, 678 |
| Eco130I | CCWWGG | 1 cut(s) | 92 |
| Eco47I | GGWCC | 2 cut(s) | 227, 303 |
| Eco57I | CTGAAG | 3 cut(s) | 447, 702, 798 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 234 |
| EcoO109I | RGGNCCY | 1 cut(s) | 303 |
| EcoRI | GAATTC | 1 cut(s) | 692 |
| EcoT14I | CCWWGG | 1 cut(s) | 92 |
| EcoT22I | ATGCAT | 1 cut(s) | 217 |
| ErhI | CCWWGG | 1 cut(s) | 92 |
| FaeI | CATG | 4 cut(s) | 58, 331, 386, 628 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 495, 527 |
| FatI | CATG | 4 cut(s) | 54, 327, 382, 624 |
| Fnu4HI | GCNGC | 4 cut(s) | 197, 289, 777, 804 |
| Fsp4HI | GCNGC | 4 cut(s) | 197, 289, 777, 804 |
| FspBI | CTAG | 5 cut(s) | 47, 93, 267, 294, 648 |
| GluI | GCNGC | 4 cut(s) | 197, 289, 777, 804 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HaeIII | GGCC | 1 cut(s) | 500 |
| Hin1II | CATG | 4 cut(s) | 58, 331, 386, 628 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 2 cut(s) | 359, 595 |
| Hpy166II | GTNNAC | 1 cut(s) | 27 |
| Hpy188I | TCNGA | 7 cut(s) | 172, 234, 364, 541, 600, 658, 817 |
| Hpy188III | TCNNGA | 4 cut(s) | 128, 404, 425, 828 |
| Hpy8I | GTNNAC | 1 cut(s) | 27 |
| HpyAV | CCTTC | 1 cut(s) | 267 |
| HpyCH4III | ACNGT | 2 cut(s) | 532, 607 |
| HpyCH4V | TGCA | 8 cut(s) | 154, 196, 215, 379, 490, 628, 779, 803 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 809 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 104, 231 |
| Hsp92II | CATG | 4 cut(s) | 58, 331, 386, 628 |
| Kzo9I | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| LpnPI | CCDG | 7 cut(s) | 65, 71, 74, 237, 298, 438, 543 |
| Lsp1109I | GCAGC | 4 cut(s) | 208, 300, 763, 815 |
| LweI | GCATC | 3 cut(s) | 176, 224, 790 |
| MaeI | CTAG | 5 cut(s) | 47, 93, 267, 294, 648 |
| MalI | GATC | 5 cut(s) | 90, 408, 420, 576, 638 |
| MboI | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| MboII | GAAGA | 8 cut(s) | 22, 185, 210, 377, 428, 440, 443, 695 |
| MfeI | CAATTG | 1 cut(s) | 411 |
| MflI | RGATCY | 2 cut(s) | 88, 418 |
| MlsI | TGGCCA | 1 cut(s) | 500 |
| MluCI | AATT | 7 cut(s) | 109, 309, 411, 570, 631, 640, 692 |
| MluNI | TGGCCA | 1 cut(s) | 500 |
| MlyI | GAGTC | 1 cut(s) | 589 |
| MmeI | TCCRAC | 1 cut(s) | 698 |
| Mox20I | TGGCCA | 1 cut(s) | 500 |
| Mph1103I | ATGCAT | 1 cut(s) | 217 |
| MscI | TGGCCA | 1 cut(s) | 500 |
| MseI | TTAA | 5 cut(s) | 159, 308, 332, 353, 465 |
| MslI | CAYNNNNRTG | 1 cut(s) | 623 |
| Msp20I | TGGCCA | 1 cut(s) | 500 |
| MunI | CAATTG | 1 cut(s) | 411 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 809 |
| NdeII | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| NlaIII | CATG | 4 cut(s) | 58, 331, 386, 628 |
| NlaIV | GGNNCC | 2 cut(s) | 90, 283 |
| NsiI | ATGCAT | 1 cut(s) | 217 |
| NspI | RCATGY | 2 cut(s) | 331, 628 |
| NspV | TTCGAA | 1 cut(s) | 690 |
| PaeI | GCATGC | 1 cut(s) | 628 |
| PciI | ACATGT | 1 cut(s) | 327 |
| PfeI | GAWTC | 1 cut(s) | 359 |
| PkrI | GCNGC | 4 cut(s) | 198, 290, 778, 805 |
| PleI | GAGTC | 1 cut(s) | 589 |
| PpsI | GAGTC | 1 cut(s) | 589 |
| PpuMI | RGGWCCY | 1 cut(s) | 303 |
| PscI | ACATGT | 1 cut(s) | 327 |
| Psp5II | RGGWCCY | 1 cut(s) | 303 |
| PspN4I | GGNNCC | 2 cut(s) | 90, 283 |
| PspPI | GGNCC | 2 cut(s) | 227, 303 |
| PspPPI | RGGWCCY | 1 cut(s) | 303 |
| PsuI | RGATCY | 2 cut(s) | 88, 418 |
| RsaI | GTAC | 8 cut(s) | 35, 98, 121, 298, 479, 529, 556, 668 |
| RsaNI | GTAC | 8 cut(s) | 34, 97, 120, 297, 478, 528, 555, 667 |
| RseI | CAYNNNNRTG | 1 cut(s) | 623 |
| SaqAI | TTAA | 5 cut(s) | 159, 308, 332, 353, 465 |
| SatI | GCNGC | 4 cut(s) | 197, 289, 777, 804 |
| Sau3AI | GATC | 5 cut(s) | 88, 406, 418, 574, 636 |
| Sau96I | GGNCC | 2 cut(s) | 227, 303 |
| ScaI | AGTACT | 5 cut(s) | 35, 121, 529, 556, 668 |
| SchI | GAGTC | 1 cut(s) | 589 |
| SfaNI | GCATC | 3 cut(s) | 176, 224, 790 |
| SfcI | CTRYAG | 1 cut(s) | 580 |
| SfuI | TTCGAA | 1 cut(s) | 690 |
| SinI | GGWCC | 2 cut(s) | 227, 303 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 623 |
| SmlI | CTYRAG | 2 cut(s) | 725, 739 |
| SmoI | CTYRAG | 2 cut(s) | 725, 739 |
| SpeI | ACTAGT | 1 cut(s) | 266 |
| SphI | GCATGC | 1 cut(s) | 628 |
| Sse9I | AATT | 7 cut(s) | 109, 309, 411, 570, 631, 640, 692 |
| SspMI | CTAG | 5 cut(s) | 47, 93, 267, 294, 648 |
| StyI | CCWWGG | 1 cut(s) | 92 |
| TaaI | ACNGT | 2 cut(s) | 532, 607 |
| TaqI | TCGA | 2 cut(s) | 690, 792 |
| TasI | AATT | 7 cut(s) | 109, 309, 411, 570, 631, 640, 692 |
| TatI | WGTACW | 6 cut(s) | 33, 119, 296, 527, 554, 666 |
| TfiI | GAWTC | 1 cut(s) | 359 |
| Tru1I | TTAA | 5 cut(s) | 159, 308, 332, 353, 465 |
| Tru9I | TTAA | 5 cut(s) | 159, 308, 332, 353, 465 |
| TscAI | CASTG | 1 cut(s) | 12 |
| TseI | GCWGC | 4 cut(s) | 196, 288, 776, 803 |
| TspDTI | ATGAA | 5 cut(s) | 29, 71, 399, 714, 813 |
| TspRI | CASTG | 1 cut(s) | 12 |
| VpaK11BI | GGWCC | 2 cut(s) | 227, 303 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 234 |
| XapI | RAATTY | 2 cut(s) | 109, 692 |
| XceI | RCATGY | 2 cut(s) | 331, 628 |
| XmaJI | CCTAGG | 1 cut(s) | 92 |
| XspI | CTAG | 5 cut(s) | 47, 93, 267, 294, 648 |
| ZrmI | AGTACT | 5 cut(s) | 35, 121, 529, 556, 668 |
| Zsp2I | ATGCAT | 1 cut(s) | 217 |