protein dimerization activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 66 |
| AclWI | GGATC | 1 cut(s) | 359 |
| AcsI | RAATTY | 1 cut(s) | 206 |
| AcvI | CACGTG | 1 cut(s) | 460 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 212, 244 |
| AluBI | AGCT | 6 cut(s) | 103, 142, 263, 389, 413, 519 |
| AluI | AGCT | 6 cut(s) | 103, 142, 263, 389, 413, 519 |
| Alw21I | GWGCWC | 1 cut(s) | 521 |
| Alw26I | GTCTC | 1 cut(s) | 437 |
| AlwI | GGATC | 1 cut(s) | 359 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 106, 266 |
| Ama87I | CYCGRG | 1 cut(s) | 384 |
| Aor13HI | TCCGGA | 1 cut(s) | 66 |
| AoxI | GGCC | 2 cut(s) | 330, 431 |
| ApeKI | GCWGC | 6 cut(s) | 103, 263, 266, 320, 350, 413 |
| ApoI | RAATTY | 1 cut(s) | 206 |
| AspS9I | GGNCC | 2 cut(s) | 127, 330 |
| AsuHPI | GGTGA | 3 cut(s) | 496, 508, 514 |
| AvaI | CYCGRG | 1 cut(s) | 384 |
| AvaII | GGWCC | 1 cut(s) | 127 |
| BanII | GRGCYC | 1 cut(s) | 521 |
| BbrPI | CACGTG | 1 cut(s) | 460 |
| Bbv12I | GWGCWC | 1 cut(s) | 521 |
| BbvCI | CCTCAGC | 1 cut(s) | 509 |
| BbvI | GCAGC | 6 cut(s) | 90, 250, 253, 307, 337, 400 |
| BccI | CCATC | 6 cut(s) | 2, 34, 46, 340, 481, 493 |
| BcoDI | GTCTC | 1 cut(s) | 437 |
| BisI | GCNGC | 6 cut(s) | 104, 264, 267, 321, 351, 414 |
| BlsI | GCNGC | 6 cut(s) | 105, 265, 268, 322, 352, 415 |
| Bme18I | GGWCC | 1 cut(s) | 127 |
| BmeT110I | CYCGRG | 1 cut(s) | 384 |
| BmgT120I | GGNCC | 2 cut(s) | 127, 330 |
| BmiI | GGNNCC | 1 cut(s) | 129 |
| BmsI | GCATC | 2 cut(s) | 263, 495 |
| Bpu10I | CCTNAGC | 2 cut(s) | 143, 509 |
| BpuEI | CTTGAG | 1 cut(s) | 173 |
| BsaAI | YACGTR | 1 cut(s) | 460 |
| BsaBI | GATNNNNATC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| BsaWI | WCCGGW | 1 cut(s) | 66 |
| Bse8I | GATNNNNATC | 1 cut(s) | 96 |
| BseAI | TCCGGA | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseGI | GGATG | 3 cut(s) | 382, 432, 519 |
| BseJI | GATNNNNATC | 1 cut(s) | 96 |
| BseMII | CTCAG | 1 cut(s) | 500 |
| BseXI | GCAGC | 6 cut(s) | 90, 250, 253, 307, 337, 400 |
| BshFI | GGCC | 2 cut(s) | 332, 433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 521 |
| BsiHKCI | CYCGRG | 1 cut(s) | 384 |
| BsiSI | CCGG | 1 cut(s) | 67 |
| BslFI | GGGAC | 1 cut(s) | 70 |
| BsmAI | GTCTC | 1 cut(s) | 437 |
| BsmFI | GGGAC | 1 cut(s) | 70 |
| BsnI | GGCC | 2 cut(s) | 332, 433 |
| BsoBI | CYCGRG | 1 cut(s) | 384 |
| Bsp1286I | GDGCHC | 1 cut(s) | 521 |
| Bsp13I | TCCGGA | 1 cut(s) | 66 |
| Bsp143I | GATC | 1 cut(s) | 364 |
| BspANI | GGCC | 2 cut(s) | 332, 433 |
| BspCNI | CTCAG | 1 cut(s) | 501 |
| BspEI | TCCGGA | 1 cut(s) | 66 |
| BspLI | GGNNCC | 1 cut(s) | 129 |
| BspPI | GGATC | 1 cut(s) | 359 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| BssMI | GATC | 1 cut(s) | 364 |
| BssT1I | CCWWGG | 1 cut(s) | 117 |
| BstBAI | YACGTR | 1 cut(s) | 460 |
| BstDEI | CTNAG | 2 cut(s) | 143, 509 |
| BstF5I | GGATG | 3 cut(s) | 382, 432, 519 |
| BstKTI | GATC | 1 cut(s) | 367 |
| BstMAI | GTCTC | 1 cut(s) | 437 |
| BstMBI | GATC | 1 cut(s) | 364 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 260, 317, 329 |
| BstV1I | GCAGC | 6 cut(s) | 90, 250, 253, 307, 337, 400 |
| BsuRI | GGCC | 2 cut(s) | 332, 433 |
| BtsCI | GGATG | 3 cut(s) | 382, 432, 519 |
| CaiI | CAGNNNCTG | 2 cut(s) | 106, 266 |
| Cfr13I | GGNCC | 2 cut(s) | 127, 330 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 441, 476 |
| DdeI | CTNAG | 2 cut(s) | 143, 509 |
| DpnI | GATC | 1 cut(s) | 366 |
| DpnII | GATC | 1 cut(s) | 364 |
| Ecl136II | GAGCTC | 1 cut(s) | 519 |
| Eco130I | CCWWGG | 1 cut(s) | 117 |
| Eco24I | GRGCYC | 1 cut(s) | 521 |
| Eco47I | GGWCC | 1 cut(s) | 127 |
| Eco53kI | GAGCTC | 1 cut(s) | 519 |
| Eco72I | CACGTG | 1 cut(s) | 460 |
| Eco88I | CYCGRG | 1 cut(s) | 384 |
| EcoICRI | GAGCTC | 1 cut(s) | 519 |
| EcoT14I | CCWWGG | 1 cut(s) | 117 |
| EcoT22I | ATGCAT | 1 cut(s) | 256 |
| EcoT38I | GRGCYC | 1 cut(s) | 521 |
| ErhI | CCWWGG | 1 cut(s) | 117 |
| FaiI | YATR | 9 cut(s) | 32, 86, 95, 159, 252, 282, 392, 473, 475 |
| FaqI | GGGAC | 1 cut(s) | 70 |
| FauNDI | CATATG | 1 cut(s) | 473 |
| Fnu4HI | GCNGC | 6 cut(s) | 104, 264, 267, 321, 351, 414 |
| FokI | GGATG | 3 cut(s) | 389, 439, 526 |
| FriOI | GRGCYC | 1 cut(s) | 521 |
| Fsp4HI | GCNGC | 6 cut(s) | 104, 264, 267, 321, 351, 414 |
| GluI | GCNGC | 6 cut(s) | 104, 264, 267, 321, 351, 414 |
| HaeIII | GGCC | 2 cut(s) | 332, 433 |
| HapII | CCGG | 1 cut(s) | 67 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| HinfI | GANTC | 2 cut(s) | 97, 148 |
| HpaII | CCGG | 1 cut(s) | 67 |
| HphI | GGTGA | 3 cut(s) | 496, 508, 514 |
| Hpy188I | TCNGA | 2 cut(s) | 369, 442 |
| Hpy188III | TCNNGA | 2 cut(s) | 67, 152 |
| Hpy99I | CGWCG | 1 cut(s) | 442 |
| HpyAV | CCTTC | 4 cut(s) | 214, 280, 286, 444 |
| HpyCH4IV | ACGT | 1 cut(s) | 459 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 178, 254, 452 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 260, 317, 329 |
| HpyF3I | CTNAG | 2 cut(s) | 143, 509 |
| HpySE526I | ACGT | 1 cut(s) | 459 |
| Kpn2I | TCCGGA | 1 cut(s) | 66 |
| Kzo9I | GATC | 1 cut(s) | 364 |
| LpnPI | CCDG | 3 cut(s) | 80, 339, 402 |
| Lsp1109I | GCAGC | 6 cut(s) | 90, 250, 253, 307, 337, 400 |
| LweI | GCATC | 2 cut(s) | 263, 495 |
| MaeII | ACGT | 1 cut(s) | 459 |
| MalI | GATC | 1 cut(s) | 366 |
| MboI | GATC | 1 cut(s) | 364 |
| MboII | GAAGA | 2 cut(s) | 29, 61 |
| MhlI | GDGCHC | 1 cut(s) | 521 |
| MluCI | AATT | 2 cut(s) | 179, 206 |
| MmeI | TCCRAC | 1 cut(s) | 420 |
| MnlI | CCTC | 4 cut(s) | 141, 408, 479, 504 |
| Mph1103I | ATGCAT | 1 cut(s) | 256 |
| MroI | TCCGGA | 1 cut(s) | 66 |
| MseI | TTAA | 1 cut(s) | 529 |
| MslI | CAYNNNNRTG | 1 cut(s) | 162 |
| MspA1I | CMGCKG | 2 cut(s) | 103, 263 |
| MspI | CCGG | 1 cut(s) | 67 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 260, 317, 329 |
| NdeI | CATATG | 1 cut(s) | 473 |
| NdeII | GATC | 1 cut(s) | 364 |
| NlaIV | GGNNCC | 1 cut(s) | 129 |
| NsiI | ATGCAT | 1 cut(s) | 256 |
| PaeR7I | CTCGAG | 1 cut(s) | 384 |
| PfeI | GAWTC | 2 cut(s) | 97, 148 |
| PkrI | GCNGC | 6 cut(s) | 105, 265, 268, 322, 352, 415 |
| PmaCI | CACGTG | 1 cut(s) | 460 |
| PmlI | CACGTG | 1 cut(s) | 460 |
| Ppu21I | YACGTR | 1 cut(s) | 460 |
| Psp124BI | GAGCTC | 1 cut(s) | 521 |
| PspCI | CACGTG | 1 cut(s) | 460 |
| PspN4I | GGNNCC | 1 cut(s) | 129 |
| PspPI | GGNCC | 2 cut(s) | 127, 330 |
| PspXI | VCTCGAGB | 1 cut(s) | 384 |
| PstNI | CAGNNNCTG | 2 cut(s) | 106, 266 |
| PvuII | CAGCTG | 2 cut(s) | 103, 263 |
| RseI | CAYNNNNRTG | 1 cut(s) | 162 |
| SacI | GAGCTC | 1 cut(s) | 521 |
| SaqAI | TTAA | 1 cut(s) | 529 |
| SatI | GCNGC | 6 cut(s) | 104, 264, 267, 321, 351, 414 |
| Sau3AI | GATC | 1 cut(s) | 364 |
| Sau96I | GGNCC | 2 cut(s) | 127, 330 |
| SduI | GDGCHC | 1 cut(s) | 521 |
| SetI | ASST | 8 cut(s) | 105, 144, 265, 297, 391, 415, 462, 521 |
| SfaNI | GCATC | 2 cut(s) | 263, 495 |
| Sfr274I | CTCGAG | 1 cut(s) | 384 |
| SinI | GGWCC | 1 cut(s) | 127 |
| SlaI | CTCGAG | 1 cut(s) | 384 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 162 |
| SmlI | CTYRAG | 2 cut(s) | 152, 384 |
| SmoI | CTYRAG | 2 cut(s) | 152, 384 |
| Sse9I | AATT | 2 cut(s) | 179, 206 |
| SstI | GAGCTC | 1 cut(s) | 521 |
| StyI | CCWWGG | 1 cut(s) | 117 |
| TaiI | ACGT | 1 cut(s) | 462 |
| TaqI | TCGA | 2 cut(s) | 133, 385 |
| TasI | AATT | 2 cut(s) | 179, 206 |
| TfiI | GAWTC | 2 cut(s) | 97, 148 |
| Tru1I | TTAA | 1 cut(s) | 529 |
| Tru9I | TTAA | 1 cut(s) | 529 |
| TseI | GCWGC | 6 cut(s) | 103, 263, 266, 320, 350, 413 |
| TspDTI | ATGAA | 2 cut(s) | 110, 204 |
| VpaK11BI | GGWCC | 1 cut(s) | 127 |
| XapI | RAATTY | 1 cut(s) | 206 |
| XhoI | CTCGAG | 1 cut(s) | 384 |
| Zsp2I | ATGCAT | 1 cut(s) | 256 |