Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 359 - 444 | 2.9e-27 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 384, 996 |
| Acc16I | TGCGCA | 1 cut(s) | 938 |
| AccBSI | CCGCTC | 1 cut(s) | 249 |
| AciI | CCGC | 4 cut(s) | 249, 472, 506, 518 |
| AclWI | GGATC | 3 cut(s) | 759, 1089, 1566 |
| AcoI | YGGCCR | 1 cut(s) | 552 |
| AcsI | RAATTY | 2 cut(s) | 679, 791 |
| AfaI | GTAC | 4 cut(s) | 302, 716, 1071, 1203 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1515, 1526, 1571, 1593 |
| AjiI | CACGTC | 1 cut(s) | 1638 |
| AjnI | CCWGG | 3 cut(s) | 142, 1530, 1570 |
| AluBI | AGCT | 8 cut(s) | 140, 191, 209, 447, 617, 799, 1366, 1403 |
| AluI | AGCT | 8 cut(s) | 140, 191, 209, 447, 617, 799, 1366, 1403 |
| Alw21I | GWGCWC | 1 cut(s) | 1424 |
| Alw26I | GTCTC | 1 cut(s) | 942 |
| AlwI | GGATC | 3 cut(s) | 759, 1089, 1566 |
| AoxI | GGCC | 6 cut(s) | 552, 1506, 1517, 1528, 1573, 1595 |
| ApaI | GGGCCC | 1 cut(s) | 1521 |
| ApeKI | GCWGC | 3 cut(s) | 508, 966, 1184 |
| ApoI | RAATTY | 2 cut(s) | 679, 791 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 310, 342 |
| AseI | ATTAAT | 2 cut(s) | 1109, 1113 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 770 |
| AspA2I | CCTAGG | 1 cut(s) | 1592 |
| AspLEI | GCGC | 2 cut(s) | 52, 939 |
| AspS9I | GGNCC | 9 cut(s) | 161, 1042, 1163, 1507, 1517, 1518, 1523, 1534, 1574 |
| AsuC2I | CCSGG | 2 cut(s) | 1521, 1527 |
| AsuHPI | GGTGA | 4 cut(s) | 69, 356, 579, 1553 |
| AsuII | TTCGAA | 1 cut(s) | 1118 |
| AvaII | GGWCC | 5 cut(s) | 161, 1042, 1163, 1523, 1534 |
| AvrII | CCTAGG | 1 cut(s) | 1592 |
| BaeGI | GKGCMC | 2 cut(s) | 1099, 1521 |
| BalI | TGGCCA | 1 cut(s) | 554 |
| BanII | GRGCYC | 2 cut(s) | 90, 1521 |
| BauI | CACGAG | 1 cut(s) | 1415 |
| BbsI | GAAGAC | 3 cut(s) | 108, 576, 1131 |
| Bbv12I | GWGCWC | 1 cut(s) | 1424 |
| BbvI | GCAGC | 3 cut(s) | 495, 978, 1196 |
| BccI | CCATC | 4 cut(s) | 361, 669, 880, 914 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 887, 921, 1406, 1440 |
| BciT130I | CCWGG | 3 cut(s) | 144, 1532, 1572 |
| BcnI | CCSGG | 2 cut(s) | 1521, 1527 |
| BcoDI | GTCTC | 1 cut(s) | 942 |
| BfaI | CTAG | 3 cut(s) | 483, 1431, 1593 |
| BisI | GCNGC | 3 cut(s) | 509, 967, 1185 |
| BlnI | CCTAGG | 1 cut(s) | 1592 |
| BlsI | GCNGC | 3 cut(s) | 510, 968, 1186 |
| Bme1390I | CCNGG | 5 cut(s) | 144, 1521, 1527, 1532, 1572 |
| Bme18I | GGWCC | 5 cut(s) | 161, 1042, 1163, 1523, 1534 |
| BmgBI | CACGTC | 1 cut(s) | 1638 |
| BmgT120I | GGNCC | 9 cut(s) | 161, 1042, 1163, 1507, 1517, 1518, 1523, 1534, 1574 |
| BmiI | GGNNCC | 3 cut(s) | 1519, 1525, 1536 |
| BmrFI | CCNGG | 5 cut(s) | 144, 1521, 1527, 1532, 1572 |
| BmrI | ACTGGG | 1 cut(s) | 1442 |
| BmsI | GCATC | 2 cut(s) | 1238, 1436 |
| BmuI | ACTGGG | 1 cut(s) | 1442 |
| BpiI | GAAGAC | 3 cut(s) | 108, 576, 1131 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1084, 1116 |
| BpmI | CTGGAG | 1 cut(s) | 1272 |
| Bpu14I | TTCGAA | 1 cut(s) | 1118 |
| BpuMI | CCSGG | 2 cut(s) | 1521, 1527 |
| BsaBI | GATNNNNATC | 1 cut(s) | 750 |
| BsaI | GGTCTC | 1 cut(s) | 942 |
| BsaJI | CCNNGG | 1 cut(s) | 1592 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1245, 1275 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1515, 1526, 1571, 1593 |
| Bse1I | ACTGG | 4 cut(s) | 239, 649, 1255, 1448 |
| Bse3DI | GCAATG | 1 cut(s) | 1068 |
| Bse8I | GATNNNNATC | 1 cut(s) | 750 |
| BseBI | CCWGG | 3 cut(s) | 144, 1532, 1572 |
| BseDI | CCNNGG | 1 cut(s) | 1592 |
| BseGI | GGATG | 4 cut(s) | 276, 853, 1023, 1217 |
| BseJI | GATNNNNATC | 1 cut(s) | 750 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1515, 1526, 1571, 1593 |
| BseMI | GCAATG | 1 cut(s) | 1068 |
| BseMII | CTCAG | 1 cut(s) | 75 |
| BseNI | ACTGG | 4 cut(s) | 239, 649, 1255, 1448 |
| BseRI | GAGGAG | 1 cut(s) | 800 |
| BseSI | GKGCMC | 2 cut(s) | 1099, 1521 |
| BseXI | GCAGC | 3 cut(s) | 495, 978, 1196 |
| BshFI | GGCC | 6 cut(s) | 554, 1508, 1519, 1530, 1575, 1597 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1424 |
| BsiSI | CCGG | 2 cut(s) | 1521, 1527 |
| BslFI | GGGAC | 4 cut(s) | 274, 1509, 1520, 1564 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1515, 1526, 1571, 1593 |
| BsmAI | GTCTC | 1 cut(s) | 942 |
| BsmFI | GGGAC | 4 cut(s) | 274, 1509, 1520, 1564 |
| BsmI | GAATGC | 1 cut(s) | 568 |
| BsnI | GGCC | 6 cut(s) | 554, 1508, 1519, 1530, 1575, 1597 |
| Bso31I | GGTCTC | 1 cut(s) | 942 |
| Bsp119I | TTCGAA | 1 cut(s) | 1118 |
| Bsp120I | GGGCCC | 1 cut(s) | 1517 |
| Bsp1286I | GDGCHC | 4 cut(s) | 90, 1099, 1424, 1521 |
| Bsp143I | GATC | 3 cut(s) | 751, 1081, 1558 |
| BspACI | CCGC | 4 cut(s) | 249, 472, 506, 518 |
| BspANI | GGCC | 6 cut(s) | 554, 1508, 1519, 1530, 1575, 1597 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspLI | GGNNCC | 3 cut(s) | 1519, 1525, 1536 |
| BspPI | GGATC | 3 cut(s) | 759, 1089, 1566 |
| BspT104I | TTCGAA | 1 cut(s) | 1118 |
| BspTNI | GGTCTC | 1 cut(s) | 942 |
| BsrBI | CCGCTC | 1 cut(s) | 249 |
| BsrDI | GCAATG | 1 cut(s) | 1068 |
| BsrI | ACTGG | 4 cut(s) | 239, 649, 1255, 1448 |
| BssECI | CCNNGG | 1 cut(s) | 1592 |
| BssMI | GATC | 3 cut(s) | 751, 1081, 1558 |
| BssSI | CACGAG | 1 cut(s) | 1415 |
| BssT1I | CCWWGG | 1 cut(s) | 1592 |
| Bst2BI | CACGAG | 1 cut(s) | 1415 |
| Bst2UI | CCWGG | 3 cut(s) | 144, 1532, 1572 |
| Bst4CI | ACNGT | 4 cut(s) | 605, 916, 1225, 1387 |
| Bst6I | CTCTTC | 3 cut(s) | 524, 822, 837 |
| BstBI | TTCGAA | 1 cut(s) | 1118 |
| BstC8I | GCNNGC | 5 cut(s) | 138, 207, 247, 941, 1319 |
| BstDEI | CTNAG | 3 cut(s) | 84, 321, 354 |
| BstF5I | GGATG | 4 cut(s) | 276, 853, 1023, 1217 |
| BstHHI | GCGC | 2 cut(s) | 52, 939 |
| BstKTI | GATC | 3 cut(s) | 754, 1084, 1561 |
| BstMAI | GTCTC | 1 cut(s) | 942 |
| BstMBI | GATC | 3 cut(s) | 751, 1081, 1558 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 517, 1190 |
| BstNI | CCWGG | 3 cut(s) | 144, 1532, 1572 |
| BstNSI | RCATGY | 3 cut(s) | 937, 1321, 1446 |
| BstSCI | CCNGG | 5 cut(s) | 142, 1519, 1525, 1530, 1570 |
| BstSLI | GKGCMC | 2 cut(s) | 1099, 1521 |
| BstV1I | GCAGC | 3 cut(s) | 495, 978, 1196 |
| BstV2I | GAAGAC | 3 cut(s) | 108, 576, 1131 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 675 |
| BsuRI | GGCC | 6 cut(s) | 554, 1508, 1519, 1530, 1575, 1597 |
| BtrI | CACGTC | 1 cut(s) | 1638 |
| BtsCI | GGATG | 4 cut(s) | 276, 853, 1023, 1217 |
| BtsI | GCAGTG | 1 cut(s) | 1422 |
| BtsIMutI | CAGTG | 6 cut(s) | 246, 642, 1248, 1305, 1422, 1625 |
| Cac8I | GCNNGC | 5 cut(s) | 138, 207, 247, 941, 1319 |
| CfoI | GCGC | 2 cut(s) | 52, 939 |
| Cfr13I | GGNCC | 9 cut(s) | 161, 1042, 1163, 1507, 1517, 1518, 1523, 1534, 1574 |
| Csp6I | GTAC | 4 cut(s) | 301, 715, 1070, 1202 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 222, 257 |
| CviAII | CATG | 6 cut(s) | 521, 934, 1073, 1318, 1443, 1588 |
| CviQI | GTAC | 4 cut(s) | 301, 715, 1070, 1202 |
| DdeI | CTNAG | 3 cut(s) | 84, 321, 354 |
| DpnI | GATC | 3 cut(s) | 753, 1083, 1560 |
| DpnII | GATC | 3 cut(s) | 751, 1081, 1558 |
| EaeI | YGGCCR | 1 cut(s) | 552 |
| Eam1104I | CTCTTC | 3 cut(s) | 524, 822, 837 |
| EarI | CTCTTC | 3 cut(s) | 524, 822, 837 |
| Eco130I | CCWWGG | 1 cut(s) | 1592 |
| Eco147I | AGGCCT | 1 cut(s) | 1597 |
| Eco24I | GRGCYC | 2 cut(s) | 90, 1521 |
| Eco31I | GGTCTC | 1 cut(s) | 942 |
| Eco47I | GGWCC | 5 cut(s) | 161, 1042, 1163, 1523, 1534 |
| EcoRI | GAATTC | 2 cut(s) | 679, 791 |
| EcoRII | CCWGG | 3 cut(s) | 142, 1530, 1570 |
| EcoT14I | CCWWGG | 1 cut(s) | 1592 |
| EcoT38I | GRGCYC | 2 cut(s) | 90, 1521 |
| ErhI | CCWWGG | 1 cut(s) | 1592 |
| FaeI | CATG | 6 cut(s) | 524, 937, 1076, 1321, 1446, 1591 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1350, 1382 |
| FaqI | GGGAC | 4 cut(s) | 274, 1509, 1520, 1564 |
| FatI | CATG | 6 cut(s) | 520, 933, 1072, 1317, 1442, 1587 |
| FauI | CCCGC | 1 cut(s) | 242 |
| FauNDI | CATATG | 1 cut(s) | 282 |
| Fnu4HI | GCNGC | 3 cut(s) | 509, 967, 1185 |
| FokI | GGATG | 4 cut(s) | 283, 860, 1030, 1204 |
| FriOI | GRGCYC | 2 cut(s) | 90, 1521 |
| Fsp4HI | GCNGC | 3 cut(s) | 509, 967, 1185 |
| FspBI | CTAG | 3 cut(s) | 483, 1431, 1593 |
| FspI | TGCGCA | 1 cut(s) | 938 |
| GlaI | GCGC | 2 cut(s) | 51, 938 |
| GluI | GCNGC | 3 cut(s) | 509, 967, 1185 |
| GsuI | CTGGAG | 1 cut(s) | 1272 |
| HaeIII | GGCC | 6 cut(s) | 554, 1508, 1519, 1530, 1575, 1597 |
| HapII | CCGG | 2 cut(s) | 1521, 1527 |
| HhaI | GCGC | 2 cut(s) | 52, 939 |
| Hin1II | CATG | 6 cut(s) | 524, 937, 1076, 1321, 1446, 1591 |
| Hin6I | GCGC | 2 cut(s) | 50, 937 |
| HinP1I | GCGC | 2 cut(s) | 50, 937 |
| HindIII | AAGCTT | 1 cut(s) | 797 |
| HinfI | GANTC | 5 cut(s) | 59, 325, 1235, 1288, 1546 |
| HpaII | CCGG | 2 cut(s) | 1521, 1527 |
| HphI | GGTGA | 4 cut(s) | 69, 356, 579, 1553 |
| Hpy188I | TCNGA | 6 cut(s) | 85, 330, 612, 1017, 1167, 1234 |
| Hpy188III | TCNNGA | 5 cut(s) | 176, 659, 1103, 1456, 1556 |
| HpyCH4III | ACNGT | 4 cut(s) | 605, 916, 1225, 1387 |
| HpyCH4IV | ACGT | 2 cut(s) | 105, 1637 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 517, 1190 |
| HpyF3I | CTNAG | 3 cut(s) | 84, 321, 354 |
| HpySE526I | ACGT | 2 cut(s) | 105, 1637 |
| Hsp92II | CATG | 6 cut(s) | 524, 937, 1076, 1321, 1446, 1591 |
| HspAI | GCGC | 2 cut(s) | 50, 937 |
| Kzo9I | GATC | 3 cut(s) | 751, 1081, 1558 |
| LmnI | GCTCC | 3 cut(s) | 145, 196, 214 |
| Lsp1109I | GCAGC | 3 cut(s) | 495, 978, 1196 |
| LweI | GCATC | 2 cut(s) | 1238, 1436 |
| MaeI | CTAG | 3 cut(s) | 483, 1431, 1593 |
| MaeII | ACGT | 2 cut(s) | 105, 1637 |
| MaeIII | GTNAC | 1 cut(s) | 1617 |
| MalI | GATC | 3 cut(s) | 753, 1083, 1560 |
| MbiI | CCGCTC | 1 cut(s) | 249 |
| MboI | GATC | 3 cut(s) | 751, 1081, 1558 |
| MfeI | CAATTG | 2 cut(s) | 411, 1027 |
| MhlI | GDGCHC | 4 cut(s) | 90, 1099, 1424, 1521 |
| MlsI | TGGCCA | 1 cut(s) | 554 |
| MluNI | TGGCCA | 1 cut(s) | 554 |
| MlyI | GAGTC | 3 cut(s) | 334, 1244, 1282 |
| MmeI | TCCRAC | 3 cut(s) | 678, 692, 995 |
| Mox20I | TGGCCA | 1 cut(s) | 554 |
| MroXI | GAANNNNTTC | 1 cut(s) | 770 |
| MscI | TGGCCA | 1 cut(s) | 554 |
| MseI | TTAA | 3 cut(s) | 873, 1109, 1113 |
| Msp20I | TGGCCA | 1 cut(s) | 554 |
| MspA1I | CMGCKG | 1 cut(s) | 508 |
| MspI | CCGG | 2 cut(s) | 1521, 1527 |
| MspR9I | CCNGG | 5 cut(s) | 144, 1521, 1527, 1532, 1572 |
| MunI | CAATTG | 2 cut(s) | 411, 1027 |
| Mva1269I | GAATGC | 1 cut(s) | 568 |
| MvaI | CCWGG | 3 cut(s) | 144, 1532, 1572 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 517, 1190 |
| NciI | CCSGG | 2 cut(s) | 1521, 1527 |
| NdeI | CATATG | 1 cut(s) | 282 |
| NdeII | GATC | 3 cut(s) | 751, 1081, 1558 |
| NlaIII | CATG | 6 cut(s) | 524, 937, 1076, 1321, 1446, 1591 |
| NlaIV | GGNNCC | 3 cut(s) | 1519, 1525, 1536 |
| NmeAIII | GCCGAG | 1 cut(s) | 7 |
| NsbI | TGCGCA | 1 cut(s) | 938 |
| NspI | RCATGY | 3 cut(s) | 937, 1321, 1446 |
| NspV | TTCGAA | 1 cut(s) | 1118 |
| PacI | TTAATTAA | 1 cut(s) | 1113 |
| PaeI | GCATGC | 1 cut(s) | 1321 |
| PceI | AGGCCT | 1 cut(s) | 1597 |
| PctI | GAATGC | 1 cut(s) | 568 |
| PdmI | GAANNNNTTC | 1 cut(s) | 770 |
| PfeI | GAWTC | 2 cut(s) | 59, 1546 |
| PfoI | TCCNGGA | 1 cut(s) | 142 |
| PkrI | GCNGC | 3 cut(s) | 510, 968, 1186 |
| PleI | GAGTC | 3 cut(s) | 333, 1243, 1282 |
| PpsI | GAGTC | 3 cut(s) | 333, 1243, 1282 |
| PshBI | ATTAAT | 2 cut(s) | 1109, 1113 |
| PsiI | TTATAA | 2 cut(s) | 384, 996 |
| Psp6I | CCWGG | 3 cut(s) | 142, 1530, 1570 |
| PspGI | CCWGG | 3 cut(s) | 142, 1530, 1570 |
| PspN4I | GGNNCC | 3 cut(s) | 1519, 1525, 1536 |
| PspOMI | GGGCCC | 1 cut(s) | 1517 |
| PspPI | GGNCC | 9 cut(s) | 161, 1042, 1163, 1507, 1517, 1518, 1523, 1534, 1574 |
| RsaI | GTAC | 4 cut(s) | 302, 716, 1071, 1203 |
| RsaNI | GTAC | 4 cut(s) | 301, 715, 1070, 1202 |
| SaqAI | TTAA | 3 cut(s) | 873, 1109, 1113 |
| SatI | GCNGC | 3 cut(s) | 509, 967, 1185 |
| Sau3AI | GATC | 3 cut(s) | 751, 1081, 1558 |
| Sau96I | GGNCC | 9 cut(s) | 161, 1042, 1163, 1507, 1517, 1518, 1523, 1534, 1574 |
| SchI | GAGTC | 3 cut(s) | 334, 1244, 1282 |
| ScrFI | CCNGG | 5 cut(s) | 144, 1521, 1527, 1532, 1572 |
| SduI | GDGCHC | 4 cut(s) | 90, 1099, 1424, 1521 |
| SfaNI | GCATC | 2 cut(s) | 1238, 1436 |
| SfuI | TTCGAA | 1 cut(s) | 1118 |
| SinI | GGWCC | 5 cut(s) | 161, 1042, 1163, 1523, 1534 |
| SphI | GCATGC | 1 cut(s) | 1321 |
| SseBI | AGGCCT | 1 cut(s) | 1597 |
| SsiI | CCGC | 4 cut(s) | 249, 472, 506, 518 |
| SspI | AATATT | 1 cut(s) | 1088 |
| SspMI | CTAG | 3 cut(s) | 483, 1431, 1593 |
| StuI | AGGCCT | 1 cut(s) | 1597 |
| StyD4I | CCNGG | 5 cut(s) | 142, 1519, 1525, 1530, 1570 |
| StyI | CCWWGG | 1 cut(s) | 1592 |
| TaaI | ACNGT | 4 cut(s) | 605, 916, 1225, 1387 |
| TaiI | ACGT | 2 cut(s) | 108, 1640 |
| TaqI | TCGA | 4 cut(s) | 595, 1118, 1134, 1463 |
| TatI | WGTACW | 2 cut(s) | 714, 1201 |
| TfiI | GAWTC | 2 cut(s) | 59, 1546 |
| Tru1I | TTAA | 3 cut(s) | 873, 1109, 1113 |
| Tru9I | TTAA | 3 cut(s) | 873, 1109, 1113 |
| TscAI | CASTG | 6 cut(s) | 246, 649, 1255, 1305, 1429, 1632 |
| TseI | GCWGC | 3 cut(s) | 508, 966, 1184 |
| TspDTI | ATGAA | 6 cut(s) | 51, 402, 1089, 1272, 1356, 1410 |
| TspRI | CASTG | 6 cut(s) | 246, 649, 1255, 1305, 1429, 1632 |
| VpaK11BI | GGWCC | 5 cut(s) | 161, 1042, 1163, 1523, 1534 |
| VspI | ATTAAT | 2 cut(s) | 1109, 1113 |
| XapI | RAATTY | 2 cut(s) | 679, 791 |
| XceI | RCATGY | 3 cut(s) | 937, 1321, 1446 |
| XmaJI | CCTAGG | 1 cut(s) | 1592 |
| XmnI | GAANNNNTTC | 1 cut(s) | 770 |
| XspI | CTAG | 3 cut(s) | 483, 1431, 1593 |