protein dimerization activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 526 |
| Acc65I | GGTACC | 1 cut(s) | 419 |
| AccB1I | GGYRCC | 2 cut(s) | 365, 419 |
| AclWI | GGATC | 2 cut(s) | 221, 278 |
| AcoI | YGGCCR | 1 cut(s) | 12 |
| AcuI | CTGAAG | 1 cut(s) | 338 |
| AdeI | CACNNNGTG | 1 cut(s) | 538 |
| AfaI | GTAC | 1 cut(s) | 421 |
| AgsI | TTSAA | 3 cut(s) | 65, 447, 566 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 485, 517 |
| Alw26I | GTCTC | 1 cut(s) | 373 |
| AlwI | GGATC | 2 cut(s) | 221, 278 |
| AoxI | GGCC | 2 cut(s) | 12, 92 |
| ApeKI | GCWGC | 2 cut(s) | 426, 473 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 68, 100 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 41 |
| Asp718I | GGTACC | 1 cut(s) | 419 |
| AspS9I | GGNCC | 1 cut(s) | 556 |
| AsuHPI | GGTGA | 1 cut(s) | 343 |
| AvaII | GGWCC | 1 cut(s) | 556 |
| BaeGI | GKGCMC | 1 cut(s) | 368 |
| BanI | GGYRCC | 2 cut(s) | 365, 419 |
| BauI | CACGAG | 1 cut(s) | 533 |
| BbsI | GAAGAC | 2 cut(s) | 513, 573 |
| BbvI | GCAGC | 2 cut(s) | 438, 460 |
| BccI | CCATC | 2 cut(s) | 133, 463 |
| BcoDI | GTCTC | 1 cut(s) | 373 |
| BfaI | CTAG | 1 cut(s) | 432 |
| BglII | AGATCT | 1 cut(s) | 126 |
| BisI | GCNGC | 2 cut(s) | 427, 474 |
| BlsI | GCNGC | 2 cut(s) | 428, 475 |
| Bme18I | GGWCC | 1 cut(s) | 556 |
| BmgT120I | GGNCC | 1 cut(s) | 556 |
| BmiI | GGNNCC | 3 cut(s) | 367, 421, 558 |
| BpiI | GAAGAC | 2 cut(s) | 513, 573 |
| BpmI | CTGGAG | 1 cut(s) | 558 |
| BsaI | GGTCTC | 1 cut(s) | 373 |
| Bse118I | RCCGGY | 2 cut(s) | 90, 422 |
| Bse3DI | GCAATG | 3 cut(s) | 397, 608, 615 |
| BseMI | GCAATG | 3 cut(s) | 397, 608, 615 |
| BseMII | CTCAG | 5 cut(s) | 47, 60, 87, 390, 525 |
| BseRI | GAGGAG | 1 cut(s) | 169 |
| BseSI | GKGCMC | 1 cut(s) | 368 |
| BseXI | GCAGC | 2 cut(s) | 438, 460 |
| BshFI | GGCC | 2 cut(s) | 14, 94 |
| BshNI | GGYRCC | 2 cut(s) | 365, 419 |
| BsiSI | CCGG | 2 cut(s) | 91, 423 |
| BslFI | GGGAC | 1 cut(s) | 9 |
| BsmAI | GTCTC | 1 cut(s) | 373 |
| BsmFI | GGGAC | 1 cut(s) | 9 |
| BsmI | GAATGC | 1 cut(s) | 41 |
| BsnI | GGCC | 2 cut(s) | 14, 94 |
| Bso31I | GGTCTC | 1 cut(s) | 373 |
| Bsp1286I | GDGCHC | 1 cut(s) | 368 |
| Bsp143I | GATC | 4 cut(s) | 126, 226, 283, 514 |
| BspANI | GGCC | 2 cut(s) | 14, 94 |
| BspCNI | CTCAG | 5 cut(s) | 46, 61, 88, 391, 524 |
| BspLI | GGNNCC | 3 cut(s) | 367, 421, 558 |
| BspPI | GGATC | 2 cut(s) | 221, 278 |
| BspT107I | GGYRCC | 2 cut(s) | 365, 419 |
| BspTNI | GGTCTC | 1 cut(s) | 373 |
| BsrDI | GCAATG | 3 cut(s) | 397, 608, 615 |
| BsrFI | RCCGGY | 2 cut(s) | 90, 422 |
| BssAI | RCCGGY | 2 cut(s) | 90, 422 |
| BssMI | GATC | 4 cut(s) | 126, 226, 283, 514 |
| BssSI | CACGAG | 1 cut(s) | 533 |
| Bst2BI | CACGAG | 1 cut(s) | 533 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 523 |
| BstC8I | GCNNGC | 2 cut(s) | 181, 483 |
| BstDEI | CTNAG | 5 cut(s) | 33, 69, 96, 399, 511 |
| BstKTI | GATC | 4 cut(s) | 129, 229, 286, 517 |
| BstMAI | GTCTC | 1 cut(s) | 373 |
| BstMBI | GATC | 4 cut(s) | 126, 226, 283, 514 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 38, 65, 404, 432, 482 |
| BstSLI | GKGCMC | 1 cut(s) | 368 |
| BstV1I | GCAGC | 2 cut(s) | 438, 460 |
| BstV2I | GAAGAC | 2 cut(s) | 513, 573 |
| BstX2I | RGATCY | 2 cut(s) | 126, 226 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 461 |
| BstYI | RGATCY | 2 cut(s) | 126, 226 |
| BsuRI | GGCC | 2 cut(s) | 14, 94 |
| BtsI | GCAGTG | 1 cut(s) | 150 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 2 cut(s) | 181, 483 |
| Cfr10I | RCCGGY | 2 cut(s) | 90, 422 |
| Cfr13I | GGNCC | 1 cut(s) | 556 |
| Csp6I | GTAC | 1 cut(s) | 420 |
| CviAII | CATG | 4 cut(s) | 47, 193, 478, 581 |
| CviQI | GTAC | 1 cut(s) | 420 |
| DdeI | CTNAG | 5 cut(s) | 33, 69, 96, 399, 511 |
| DpnI | GATC | 4 cut(s) | 128, 228, 285, 516 |
| DpnII | GATC | 4 cut(s) | 126, 226, 283, 514 |
| DraI | TTTAAA | 1 cut(s) | 166 |
| DraIII | CACNNNGTG | 1 cut(s) | 538 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 526 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 526 |
| EaeI | YGGCCR | 1 cut(s) | 12 |
| Eco31I | GGTCTC | 1 cut(s) | 373 |
| Eco32I | GATATC | 2 cut(s) | 9, 52 |
| Eco47I | GGWCC | 1 cut(s) | 556 |
| Eco57I | CTGAAG | 1 cut(s) | 338 |
| EcoRV | GATATC | 2 cut(s) | 9, 52 |
| FaeI | CATG | 4 cut(s) | 50, 196, 481, 584 |
| FaiI | YATR | 7 cut(s) | 48, 194, 262, 271, 303, 479, 582 |
| FaqI | GGGAC | 1 cut(s) | 9 |
| FatI | CATG | 4 cut(s) | 46, 192, 477, 580 |
| Fnu4HI | GCNGC | 2 cut(s) | 427, 474 |
| Fsp4HI | GCNGC | 2 cut(s) | 427, 474 |
| FspBI | CTAG | 1 cut(s) | 432 |
| GluI | GCNGC | 2 cut(s) | 427, 474 |
| GsuI | CTGGAG | 1 cut(s) | 558 |
| HaeIII | GGCC | 2 cut(s) | 14, 94 |
| HapII | CCGG | 2 cut(s) | 91, 423 |
| Hin1II | CATG | 4 cut(s) | 50, 196, 481, 584 |
| HindIII | AAGCTT | 3 cut(s) | 239, 593, 624 |
| HinfI | GANTC | 2 cut(s) | 196, 509 |
| HpaII | CCGG | 2 cut(s) | 91, 423 |
| HphI | GGTGA | 1 cut(s) | 343 |
| Hpy166II | GTNNAC | 1 cut(s) | 334 |
| Hpy188I | TCNGA | 3 cut(s) | 36, 514, 519 |
| Hpy188III | TCNNGA | 2 cut(s) | 447, 575 |
| Hpy8I | GTNNAC | 1 cut(s) | 334 |
| HpyAV | CCTTC | 1 cut(s) | 313 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 523 |
| HpyCH4V | TGCA | 5 cut(s) | 179, 290, 481, 601, 620 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 38, 65, 404, 432, 482 |
| HpyF3I | CTNAG | 5 cut(s) | 33, 69, 96, 399, 511 |
| Hsp92II | CATG | 4 cut(s) | 50, 196, 481, 584 |
| KpnI | GGTACC | 1 cut(s) | 423 |
| Kzo9I | GATC | 4 cut(s) | 126, 226, 283, 514 |
| LmnI | GCTCC | 1 cut(s) | 156 |
| LpnPI | CCDG | 7 cut(s) | 104, 108, 300, 314, 436, 539, 588 |
| Lsp1109I | GCAGC | 2 cut(s) | 438, 460 |
| MaeI | CTAG | 1 cut(s) | 432 |
| MaeIII | GTNAC | 1 cut(s) | 528 |
| MalI | GATC | 4 cut(s) | 128, 228, 285, 516 |
| MboI | GATC | 4 cut(s) | 126, 226, 283, 514 |
| MboII | GAAGA | 5 cut(s) | 160, 478, 518, 578, 596 |
| MfeI | CAATTG | 1 cut(s) | 60 |
| MflI | RGATCY | 2 cut(s) | 126, 226 |
| MhlI | GDGCHC | 1 cut(s) | 368 |
| MluCI | AATT | 3 cut(s) | 60, 247, 323 |
| MlyI | GAGTC | 1 cut(s) | 503 |
| MmeI | TCCRAC | 1 cut(s) | 483 |
| MnlI | CCTC | 8 cut(s) | 92, 147, 240, 249, 347, 388, 529, 582 |
| MroXI | GAANNNNTTC | 1 cut(s) | 41 |
| MseI | TTAA | 3 cut(s) | 165, 276, 628 |
| MspI | CCGG | 2 cut(s) | 91, 423 |
| MunI | CAATTG | 1 cut(s) | 60 |
| Mva1269I | GAATGC | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 38, 65, 404, 432, 482 |
| NdeII | GATC | 4 cut(s) | 126, 226, 283, 514 |
| NlaIII | CATG | 4 cut(s) | 50, 196, 481, 584 |
| NlaIV | GGNNCC | 3 cut(s) | 367, 421, 558 |
| NmeAIII | GCCGAG | 1 cut(s) | 337 |
| NmuCI | GTSAC | 1 cut(s) | 528 |
| PctI | GAATGC | 1 cut(s) | 41 |
| PdmI | GAANNNNTTC | 1 cut(s) | 41 |
| PfeI | GAWTC | 1 cut(s) | 196 |
| PkrI | GCNGC | 2 cut(s) | 428, 475 |
| PleI | GAGTC | 1 cut(s) | 503 |
| PpsI | GAGTC | 1 cut(s) | 503 |
| PspN4I | GGNNCC | 3 cut(s) | 367, 421, 558 |
| PspPI | GGNCC | 1 cut(s) | 556 |
| PsuI | RGATCY | 2 cut(s) | 126, 226 |
| RsaI | GTAC | 1 cut(s) | 421 |
| RsaNI | GTAC | 1 cut(s) | 420 |
| SaqAI | TTAA | 3 cut(s) | 165, 276, 628 |
| SatI | GCNGC | 2 cut(s) | 427, 474 |
| Sau3AI | GATC | 4 cut(s) | 126, 226, 283, 514 |
| Sau96I | GGNCC | 1 cut(s) | 556 |
| SchI | GAGTC | 1 cut(s) | 503 |
| SduI | GDGCHC | 1 cut(s) | 368 |
| SinI | GGWCC | 1 cut(s) | 556 |
| Sse9I | AATT | 3 cut(s) | 60, 247, 323 |
| SspI | AATATT | 1 cut(s) | 173 |
| SspMI | CTAG | 1 cut(s) | 432 |
| TaaI | ACNGT | 2 cut(s) | 23, 523 |
| TaqI | TCGA | 1 cut(s) | 232 |
| TasI | AATT | 3 cut(s) | 60, 247, 323 |
| TfiI | GAWTC | 1 cut(s) | 196 |
| Tru1I | TTAA | 3 cut(s) | 165, 276, 628 |
| Tru9I | TTAA | 3 cut(s) | 165, 276, 628 |
| TscAI | CASTG | 1 cut(s) | 150 |
| TseFI | GTSAC | 1 cut(s) | 528 |
| TseI | GCWGC | 2 cut(s) | 426, 473 |
| Tsp45I | GTSAC | 1 cut(s) | 528 |
| TspDTI | ATGAA | 3 cut(s) | 209, 342, 597 |
| TspRI | CASTG | 1 cut(s) | 150 |
| VpaK11BI | GGWCC | 1 cut(s) | 556 |
| XmnI | GAANNNNTTC | 1 cut(s) | 41 |
| XspI | CTAG | 1 cut(s) | 432 |