Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 906, 1113 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 527 |
| AclWI | GGATC | 4 cut(s) | 618, 631, 890, 903 |
| AcsI | RAATTY | 6 cut(s) | 360, 393, 644, 736, 962, 1015 |
| AcuI | CTGAAG | 2 cut(s) | 567, 588 |
| AcvI | CACGTG | 1 cut(s) | 326 |
| AfaI | GTAC | 5 cut(s) | 19, 430, 725, 863, 1007 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 527, 633, 778 |
| AflIII | ACRYGT | 2 cut(s) | 325, 989 |
| AgsI | TTSAA | 4 cut(s) | 63, 545, 967, 1125 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1062 |
| AhlI | ACTAGT | 1 cut(s) | 1061 |
| AluBI | AGCT | 4 cut(s) | 26, 378, 940, 1253 |
| AluI | AGCT | 4 cut(s) | 26, 378, 940, 1253 |
| Alw26I | GTCTC | 5 cut(s) | 25, 233, 286, 1049, 1074 |
| AlwI | GGATC | 4 cut(s) | 618, 631, 890, 903 |
| Ama87I | CYCGRG | 1 cut(s) | 957 |
| ApeKI | GCWGC | 1 cut(s) | 782 |
| ApoI | RAATTY | 6 cut(s) | 360, 393, 644, 736, 962, 1015 |
| AspS9I | GGNCC | 1 cut(s) | 417 |
| AsuHPI | GGTGA | 1 cut(s) | 276 |
| AvaI | CYCGRG | 1 cut(s) | 957 |
| AvaII | GGWCC | 1 cut(s) | 417 |
| BamHI | GGATCC | 2 cut(s) | 623, 895 |
| BbrPI | CACGTG | 1 cut(s) | 326 |
| BbvI | GCAGC | 1 cut(s) | 794 |
| BccI | CCATC | 1 cut(s) | 428 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 641, 675 |
| BciVI | GTATCC | 1 cut(s) | 67 |
| BcoDI | GTCTC | 5 cut(s) | 25, 233, 286, 1049, 1074 |
| BcuI | ACTAGT | 1 cut(s) | 1061 |
| BfaI | CTAG | 3 cut(s) | 129, 1062, 1175 |
| BfuI | GTATCC | 1 cut(s) | 67 |
| BglII | AGATCT | 2 cut(s) | 161, 753 |
| BisI | GCNGC | 1 cut(s) | 783 |
| BlsI | GCNGC | 1 cut(s) | 784 |
| Bme18I | GGWCC | 1 cut(s) | 417 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1062 |
| BmeT110I | CYCGRG | 1 cut(s) | 957 |
| BmgT120I | GGNCC | 1 cut(s) | 417 |
| BmiI | GGNNCC | 2 cut(s) | 625, 897 |
| BmsI | GCATC | 1 cut(s) | 144 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1254 |
| BpuEI | CTTGAG | 1 cut(s) | 1112 |
| BsaAI | YACGTR | 1 cut(s) | 326 |
| BsaBI | GATNNNNATC | 1 cut(s) | 438 |
| BsaJI | CCNNGG | 2 cut(s) | 627, 786 |
| BsaWI | WCCGGW | 1 cut(s) | 286 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 527, 633, 778 |
| Bse3DI | GCAATG | 1 cut(s) | 1284 |
| Bse8I | GATNNNNATC | 1 cut(s) | 438 |
| BseDI | CCNNGG | 2 cut(s) | 627, 786 |
| BseGI | GGATG | 3 cut(s) | 10, 342, 1168 |
| BseJI | GATNNNNATC | 1 cut(s) | 438 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 527, 633, 778 |
| BseMI | GCAATG | 1 cut(s) | 1284 |
| BseMII | CTCAG | 2 cut(s) | 393, 1268 |
| BseRI | GAGGAG | 2 cut(s) | 59, 507 |
| BseXI | GCAGC | 1 cut(s) | 794 |
| BsiHKCI | CYCGRG | 1 cut(s) | 957 |
| BsiSI | CCGG | 1 cut(s) | 287 |
| BslFI | GGGAC | 1 cut(s) | 730 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 527, 633, 778 |
| BsmAI | GTCTC | 5 cut(s) | 25, 233, 286, 1049, 1074 |
| BsmFI | GGGAC | 1 cut(s) | 730 |
| BsoBI | CYCGRG | 1 cut(s) | 957 |
| Bsp1407I | TGTACA | 1 cut(s) | 1005 |
| Bsp143I | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| Bsp19I | CCATGG | 1 cut(s) | 786 |
| BspCNI | CTCAG | 2 cut(s) | 392, 1267 |
| BspHI | TCATGA | 1 cut(s) | 807 |
| BspLI | GGNNCC | 2 cut(s) | 625, 897 |
| BspPI | GGATC | 4 cut(s) | 618, 631, 890, 903 |
| BsrDI | GCAATG | 1 cut(s) | 1284 |
| BsrGI | TGTACA | 1 cut(s) | 1005 |
| BssECI | CCNNGG | 2 cut(s) | 627, 786 |
| BssMI | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| BssT1I | CCWWGG | 1 cut(s) | 786 |
| Bst4CI | ACNGT | 1 cut(s) | 947 |
| BstAUI | TGTACA | 1 cut(s) | 1005 |
| BstBAI | YACGTR | 1 cut(s) | 326 |
| BstC8I | GCNNGC | 1 cut(s) | 219 |
| BstDEI | CTNAG | 4 cut(s) | 379, 750, 936, 1254 |
| BstDSI | CCRYGG | 1 cut(s) | 786 |
| BstF5I | GGATG | 3 cut(s) | 10, 342, 1168 |
| BstKTI | GATC | 5 cut(s) | 164, 385, 626, 756, 898 |
| BstMAI | GTCTC | 5 cut(s) | 25, 233, 286, 1049, 1074 |
| BstMBI | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 117, 452, 1219 |
| BstNSI | RCATGY | 2 cut(s) | 705, 993 |
| BstV1I | GCAGC | 1 cut(s) | 794 |
| BstX2I | RGATCY | 4 cut(s) | 161, 623, 753, 895 |
| BstYI | RGATCY | 4 cut(s) | 161, 623, 753, 895 |
| BsuI | GTATCC | 1 cut(s) | 67 |
| BtgI | CCRYGG | 1 cut(s) | 786 |
| BtsCI | GGATG | 3 cut(s) | 10, 342, 1168 |
| Cac8I | GCNNGC | 1 cut(s) | 219 |
| CciI | TCATGA | 1 cut(s) | 807 |
| Cfr13I | GGNCC | 1 cut(s) | 417 |
| Csp6I | GTAC | 5 cut(s) | 18, 429, 724, 862, 1006 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1057, 1092 |
| CviAII | CATG | 6 cut(s) | 702, 787, 808, 835, 990, 1131 |
| CviJI | RGCY | 9 cut(s) | 26, 111, 127, 378, 438, 785, 929, 940, 1253 |
| CviKI_1 | RGCY | 9 cut(s) | 26, 111, 127, 378, 438, 785, 929, 940, 1253 |
| CviQI | GTAC | 5 cut(s) | 18, 429, 724, 862, 1006 |
| DdeI | CTNAG | 4 cut(s) | 379, 750, 936, 1254 |
| DpnI | GATC | 5 cut(s) | 163, 384, 625, 755, 897 |
| DpnII | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| DraI | TTTAAA | 1 cut(s) | 343 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1062 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1062 |
| Eco130I | CCWWGG | 1 cut(s) | 786 |
| Eco47I | GGWCC | 1 cut(s) | 417 |
| Eco57I | CTGAAG | 2 cut(s) | 567, 588 |
| Eco72I | CACGTG | 1 cut(s) | 326 |
| Eco88I | CYCGRG | 1 cut(s) | 957 |
| EcoRI | GAATTC | 1 cut(s) | 962 |
| EcoT14I | CCWWGG | 1 cut(s) | 786 |
| ErhI | CCWWGG | 1 cut(s) | 786 |
| FaeI | CATG | 6 cut(s) | 705, 790, 811, 838, 993, 1134 |
| FaqI | GGGAC | 1 cut(s) | 730 |
| FatI | CATG | 6 cut(s) | 701, 786, 807, 834, 989, 1130 |
| FauNDI | CATATG | 1 cut(s) | 510 |
| Fnu4HI | GCNGC | 1 cut(s) | 783 |
| FokI | GGATG | 3 cut(s) | 17, 349, 1175 |
| Fsp4HI | GCNGC | 1 cut(s) | 783 |
| FspBI | CTAG | 3 cut(s) | 129, 1062, 1175 |
| GluI | GCNGC | 1 cut(s) | 783 |
| HapII | CCGG | 1 cut(s) | 287 |
| Hin1II | CATG | 6 cut(s) | 705, 790, 811, 838, 993, 1134 |
| HincII | GTYRAC | 2 cut(s) | 466, 1266 |
| HindII | GTYRAC | 2 cut(s) | 466, 1266 |
| HindIII | AAGCTT | 1 cut(s) | 938 |
| HinfI | GANTC | 6 cut(s) | 33, 47, 104, 578, 595, 953 |
| HpaI | GTTAAC | 1 cut(s) | 1266 |
| HpaII | CCGG | 1 cut(s) | 287 |
| HphI | GGTGA | 1 cut(s) | 276 |
| Hpy166II | GTNNAC | 4 cut(s) | 466, 1006, 1008, 1266 |
| Hpy188I | TCNGA | 5 cut(s) | 366, 382, 409, 628, 1236 |
| Hpy188III | TCNNGA | 5 cut(s) | 599, 808, 957, 959, 1091 |
| Hpy8I | GTNNAC | 4 cut(s) | 466, 1006, 1008, 1266 |
| HpyAV | CCTTC | 1 cut(s) | 1067 |
| HpyCH4III | ACNGT | 1 cut(s) | 947 |
| HpyCH4IV | ACGT | 1 cut(s) | 325 |
| HpyCH4V | TGCA | 7 cut(s) | 86, 662, 878, 884, 913, 1037, 1150 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 117, 452, 1219 |
| HpyF3I | CTNAG | 4 cut(s) | 379, 750, 936, 1254 |
| HpySE526I | ACGT | 1 cut(s) | 325 |
| Hsp92II | CATG | 6 cut(s) | 705, 790, 811, 838, 993, 1134 |
| KspAI | GTTAAC | 1 cut(s) | 1266 |
| Kzo9I | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| LmnI | GCTCC | 1 cut(s) | 1219 |
| LpnPI | CCDG | 7 cut(s) | 121, 180, 300, 371, 513, 699, 1241 |
| Lsp1109I | GCAGC | 1 cut(s) | 794 |
| LweI | GCATC | 1 cut(s) | 144 |
| MaeI | CTAG | 3 cut(s) | 129, 1062, 1175 |
| MaeII | ACGT | 1 cut(s) | 325 |
| MaeIII | GTNAC | 6 cut(s) | 7, 532, 586, 697, 973, 1064 |
| MalI | GATC | 5 cut(s) | 163, 384, 625, 755, 897 |
| MboI | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| MboII | GAAGA | 8 cut(s) | 107, 215, 402, 573, 581, 736, 748, 803 |
| MfeI | CAATTG | 1 cut(s) | 879 |
| MflI | RGATCY | 4 cut(s) | 161, 623, 753, 895 |
| MlyI | GAGTC | 3 cut(s) | 27, 56, 113 |
| MmeI | TCCRAC | 2 cut(s) | 790, 1070 |
| MslI | CAYNNNNRTG | 2 cut(s) | 528, 988 |
| MspI | CCGG | 1 cut(s) | 287 |
| MunI | CAATTG | 1 cut(s) | 879 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 117, 452, 1219 |
| NcoI | CCATGG | 1 cut(s) | 786 |
| NdeI | CATATG | 1 cut(s) | 510 |
| NdeII | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| NlaIII | CATG | 6 cut(s) | 705, 790, 811, 838, 993, 1134 |
| NlaIV | GGNNCC | 2 cut(s) | 625, 897 |
| NmuCI | GTSAC | 1 cut(s) | 1064 |
| NspI | RCATGY | 2 cut(s) | 705, 993 |
| PaeR7I | CTCGAG | 1 cut(s) | 957 |
| PagI | TCATGA | 1 cut(s) | 807 |
| PciI | ACATGT | 1 cut(s) | 989 |
| PfeI | GAWTC | 3 cut(s) | 578, 595, 953 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 527 |
| PkrI | GCNGC | 1 cut(s) | 784 |
| PleI | GAGTC | 3 cut(s) | 27, 55, 112 |
| PmaCI | CACGTG | 1 cut(s) | 326 |
| PmlI | CACGTG | 1 cut(s) | 326 |
| PpsI | GAGTC | 3 cut(s) | 27, 55, 112 |
| Ppu21I | YACGTR | 1 cut(s) | 326 |
| PscI | ACATGT | 1 cut(s) | 989 |
| PsiI | TTATAA | 2 cut(s) | 906, 1113 |
| PspCI | CACGTG | 1 cut(s) | 326 |
| PspN4I | GGNNCC | 2 cut(s) | 625, 897 |
| PspPI | GGNCC | 1 cut(s) | 417 |
| PsuI | RGATCY | 4 cut(s) | 161, 623, 753, 895 |
| RsaI | GTAC | 5 cut(s) | 19, 430, 725, 863, 1007 |
| RsaNI | GTAC | 5 cut(s) | 18, 429, 724, 862, 1006 |
| RseI | CAYNNNNRTG | 2 cut(s) | 528, 988 |
| SatI | GCNGC | 1 cut(s) | 783 |
| Sau3AI | GATC | 5 cut(s) | 161, 382, 623, 753, 895 |
| Sau96I | GGNCC | 1 cut(s) | 417 |
| SchI | GAGTC | 3 cut(s) | 27, 56, 113 |
| SetI | ASST | 9 cut(s) | 28, 328, 380, 422, 686, 942, 1078, 1255, 1260 |
| SfaNI | GCATC | 1 cut(s) | 144 |
| Sfr274I | CTCGAG | 1 cut(s) | 957 |
| SinI | GGWCC | 1 cut(s) | 417 |
| SlaI | CTCGAG | 1 cut(s) | 957 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 528, 988 |
| SmlI | CTYRAG | 2 cut(s) | 957, 1091 |
| SmoI | CTYRAG | 2 cut(s) | 957, 1091 |
| SpeI | ACTAGT | 1 cut(s) | 1061 |
| SspI | AATATT | 2 cut(s) | 142, 313 |
| SspMI | CTAG | 3 cut(s) | 129, 1062, 1175 |
| StyI | CCWWGG | 1 cut(s) | 786 |
| TaaI | ACNGT | 1 cut(s) | 947 |
| TaiI | ACGT | 1 cut(s) | 328 |
| TaqI | TCGA | 2 cut(s) | 598, 958 |
| TatI | WGTACW | 3 cut(s) | 428, 861, 1005 |
| TfiI | GAWTC | 3 cut(s) | 578, 595, 953 |
| TseFI | GTSAC | 1 cut(s) | 1064 |
| TseI | GCWGC | 1 cut(s) | 782 |
| Tsp45I | GTSAC | 1 cut(s) | 1064 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 527 |
| VpaK11BI | GGWCC | 1 cut(s) | 417 |
| XapI | RAATTY | 6 cut(s) | 360, 393, 644, 736, 962, 1015 |
| XceI | RCATGY | 2 cut(s) | 705, 993 |
| XhoI | CTCGAG | 1 cut(s) | 957 |
| XspI | CTAG | 3 cut(s) | 129, 1062, 1175 |