protein dimerization activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 538 |
| AcsI | RAATTY | 8 cut(s) | 222, 414, 452, 507, 829, 904, 1000, 1301 |
| AfaI | GTAC | 4 cut(s) | 138, 196, 632, 807 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 528, 640, 641 |
| AflIII | ACRYGT | 2 cut(s) | 428, 555 |
| AgsI | TTSAA | 8 cut(s) | 104, 113, 359, 491, 671, 732, 829, 1051 |
| AhlI | ACTAGT | 3 cut(s) | 80, 197, 275 |
| AluBI | AGCT | 3 cut(s) | 35, 41, 335 |
| AluI | AGCT | 3 cut(s) | 35, 41, 335 |
| Alw21I | GWGCWC | 1 cut(s) | 820 |
| Alw26I | GTCTC | 1 cut(s) | 913 |
| AoxI | GGCC | 1 cut(s) | 1043 |
| ApeKI | GCWGC | 4 cut(s) | 299, 746, 1238, 1286 |
| ApoI | RAATTY | 8 cut(s) | 222, 414, 452, 507, 829, 904, 1000, 1301 |
| AseI | ATTAAT | 2 cut(s) | 12, 1215 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AspLEI | GCGC | 1 cut(s) | 690 |
| AspS9I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| AsuHPI | GGTGA | 1 cut(s) | 1081 |
| AsuII | TTCGAA | 1 cut(s) | 895 |
| AvaII | GGWCC | 2 cut(s) | 251, 863 |
| Bbv12I | GWGCWC | 1 cut(s) | 820 |
| BbvI | GCAGC | 4 cut(s) | 286, 733, 1250, 1273 |
| BccI | CCATC | 5 cut(s) | 719, 839, 874, 990, 1111 |
| BceAI | ACGGC | 1 cut(s) | 1030 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 278, 312 |
| BcoDI | GTCTC | 1 cut(s) | 913 |
| BcuI | ACTAGT | 3 cut(s) | 80, 197, 275 |
| BfaI | CTAG | 6 cut(s) | 72, 81, 198, 276, 1025, 1133 |
| BisI | GCNGC | 4 cut(s) | 300, 747, 1239, 1287 |
| BlsI | GCNGC | 4 cut(s) | 301, 748, 1240, 1288 |
| Bme18I | GGWCC | 2 cut(s) | 251, 863 |
| BmgT120I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| BmiI | GGNNCC | 1 cut(s) | 1044 |
| BmsI | GCATC | 3 cut(s) | 65, 1169, 1267 |
| BpmI | CTGGAG | 1 cut(s) | 57 |
| Bpu14I | TTCGAA | 1 cut(s) | 895 |
| BpuEI | CTTGAG | 1 cut(s) | 797 |
| BsaAI | YACGTR | 1 cut(s) | 305 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1229 |
| BsaJI | CCNNGG | 1 cut(s) | 124 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 528, 640, 641 |
| Bse3DI | GCAATG | 2 cut(s) | 167, 1296 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1229 |
| BseDI | CCNNGG | 1 cut(s) | 124 |
| BseGI | GGATG | 2 cut(s) | 10, 1160 |
| BseJI | GATNNNNATC | 1 cut(s) | 1229 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 528, 640, 641 |
| BseMI | GCAATG | 2 cut(s) | 167, 1296 |
| BseXI | GCAGC | 4 cut(s) | 286, 733, 1250, 1273 |
| BsgI | GTGCAG | 2 cut(s) | 285, 552 |
| Bsh1236I | CGCG | 1 cut(s) | 538 |
| BshFI | GGCC | 1 cut(s) | 1045 |
| BsiHKAI | GWGCWC | 1 cut(s) | 820 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 528, 640, 641 |
| BsmAI | GTCTC | 1 cut(s) | 913 |
| BsmI | GAATGC | 2 cut(s) | 301, 690 |
| BsnI | GGCC | 1 cut(s) | 1045 |
| Bsp119I | TTCGAA | 1 cut(s) | 895 |
| Bsp1286I | GDGCHC | 1 cut(s) | 820 |
| Bsp143I | GATC | 1 cut(s) | 472 |
| Bsp19I | CCATGG | 1 cut(s) | 124 |
| BspANI | GGCC | 1 cut(s) | 1045 |
| BspFNI | CGCG | 1 cut(s) | 538 |
| BspHI | TCATGA | 2 cut(s) | 226, 694 |
| BspLI | GGNNCC | 1 cut(s) | 1044 |
| BspT104I | TTCGAA | 1 cut(s) | 895 |
| BsrDI | GCAATG | 2 cut(s) | 167, 1296 |
| BssECI | CCNNGG | 1 cut(s) | 124 |
| BssMI | GATC | 1 cut(s) | 472 |
| BssT1I | CCWWGG | 1 cut(s) | 124 |
| Bst4CI | ACNGT | 1 cut(s) | 930 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1286 |
| BstBAI | YACGTR | 1 cut(s) | 305 |
| BstBI | TTCGAA | 1 cut(s) | 895 |
| BstDEI | CTNAG | 4 cut(s) | 63, 173, 459, 1170 |
| BstDSI | CCRYGG | 1 cut(s) | 124 |
| BstF5I | GGATG | 2 cut(s) | 10, 1160 |
| BstFNI | CGCG | 1 cut(s) | 538 |
| BstHHI | GCGC | 1 cut(s) | 690 |
| BstKTI | GATC | 1 cut(s) | 475 |
| BstMAI | GTCTC | 1 cut(s) | 913 |
| BstMBI | GATC | 1 cut(s) | 472 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1247, 1286 |
| BstNSI | RCATGY | 2 cut(s) | 432, 559 |
| BstUI | CGCG | 1 cut(s) | 538 |
| BstV1I | GCAGC | 4 cut(s) | 286, 733, 1250, 1273 |
| BsuRI | GGCC | 1 cut(s) | 1045 |
| BtgI | CCRYGG | 1 cut(s) | 124 |
| BtgZI | GCGATG | 1 cut(s) | 519 |
| BtsCI | GGATG | 2 cut(s) | 10, 1160 |
| CciI | TCATGA | 2 cut(s) | 226, 694 |
| CfoI | GCGC | 1 cut(s) | 690 |
| Cfr13I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| CseI | GACGC | 1 cut(s) | 527 |
| Csp6I | GTAC | 4 cut(s) | 137, 195, 631, 806 |
| CviJI | RGCY | 9 cut(s) | 35, 41, 335, 422, 746, 1045, 1143, 1286, 1319 |
| CviKI_1 | RGCY | 9 cut(s) | 35, 41, 335, 422, 746, 1045, 1143, 1286, 1319 |
| CviQI | GTAC | 4 cut(s) | 137, 195, 631, 806 |
| DdeI | CTNAG | 4 cut(s) | 63, 173, 459, 1170 |
| DpnI | GATC | 1 cut(s) | 474 |
| DpnII | GATC | 1 cut(s) | 472 |
| DraI | TTTAAA | 3 cut(s) | 373, 597, 1273 |
| Eco130I | CCWWGG | 1 cut(s) | 124 |
| Eco32I | GATATC | 1 cut(s) | 1231 |
| Eco47I | GGWCC | 2 cut(s) | 251, 863 |
| EcoO109I | RGGNCCY | 1 cut(s) | 251 |
| EcoRI | GAATTC | 2 cut(s) | 904, 1000 |
| EcoRV | GATATC | 1 cut(s) | 1231 |
| EcoT14I | CCWWGG | 1 cut(s) | 124 |
| EcoT22I | ATGCAT | 1 cut(s) | 1282 |
| ErhI | CCWWGG | 1 cut(s) | 124 |
| Fnu4HI | GCNGC | 4 cut(s) | 300, 747, 1239, 1287 |
| FokI | GGATG | 2 cut(s) | 17, 1147 |
| Fsp4HI | GCNGC | 4 cut(s) | 300, 747, 1239, 1287 |
| FspBI | CTAG | 6 cut(s) | 72, 81, 198, 276, 1025, 1133 |
| GlaI | GCGC | 1 cut(s) | 689 |
| GluI | GCNGC | 4 cut(s) | 300, 747, 1239, 1287 |
| GsuI | CTGGAG | 1 cut(s) | 57 |
| HaeIII | GGCC | 1 cut(s) | 1045 |
| HgaI | GACGC | 1 cut(s) | 527 |
| HhaI | GCGC | 1 cut(s) | 690 |
| Hin6I | GCGC | 1 cut(s) | 688 |
| HinP1I | GCGC | 1 cut(s) | 688 |
| HinfI | GANTC | 3 cut(s) | 75, 382, 647 |
| HphI | GGTGA | 1 cut(s) | 1081 |
| Hpy188I | TCNGA | 3 cut(s) | 523, 1108, 1258 |
| Hpy188III | TCNNGA | 4 cut(s) | 227, 254, 264, 695 |
| Hpy99I | CGWCG | 1 cut(s) | 390 |
| HpyAV | CCTTC | 2 cut(s) | 204, 1288 |
| HpyCH4III | ACNGT | 1 cut(s) | 930 |
| HpyCH4IV | ACGT | 2 cut(s) | 304, 808 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1247, 1286 |
| HpyF3I | CTNAG | 4 cut(s) | 63, 173, 459, 1170 |
| HpySE526I | ACGT | 2 cut(s) | 304, 808 |
| HspAI | GCGC | 1 cut(s) | 688 |
| Kzo9I | GATC | 1 cut(s) | 472 |
| LmnI | GCTCC | 1 cut(s) | 38 |
| LpnPI | CCDG | 5 cut(s) | 21, 177, 249, 267, 1167 |
| Lsp1109I | GCAGC | 4 cut(s) | 286, 733, 1250, 1273 |
| LweI | GCATC | 3 cut(s) | 65, 1169, 1267 |
| MaeI | CTAG | 6 cut(s) | 72, 81, 198, 276, 1025, 1133 |
| MaeII | ACGT | 2 cut(s) | 304, 808 |
| MaeIII | GTNAC | 3 cut(s) | 551, 558, 648 |
| MalI | GATC | 1 cut(s) | 474 |
| MboI | GATC | 1 cut(s) | 472 |
| MboII | GAAGA | 5 cut(s) | 51, 460, 683, 749, 900 |
| MfeI | CAATTG | 1 cut(s) | 1122 |
| MhlI | GDGCHC | 1 cut(s) | 820 |
| MlyI | GAGTC | 1 cut(s) | 656 |
| Mph1103I | ATGCAT | 1 cut(s) | 1282 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| MunI | CAATTG | 1 cut(s) | 1122 |
| Mva1269I | GAATGC | 2 cut(s) | 301, 690 |
| MvnI | CGCG | 1 cut(s) | 538 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1247, 1286 |
| NcoI | CCATGG | 1 cut(s) | 124 |
| NdeII | GATC | 1 cut(s) | 472 |
| NlaIV | GGNNCC | 1 cut(s) | 1044 |
| NmuCI | GTSAC | 2 cut(s) | 558, 648 |
| NsiI | ATGCAT | 1 cut(s) | 1282 |
| NspI | RCATGY | 2 cut(s) | 432, 559 |
| NspV | TTCGAA | 1 cut(s) | 895 |
| PagI | TCATGA | 2 cut(s) | 226, 694 |
| PciI | ACATGT | 2 cut(s) | 428, 555 |
| PctI | GAATGC | 2 cut(s) | 301, 690 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 2 cut(s) | 75, 382 |
| PkrI | GCNGC | 4 cut(s) | 301, 748, 1240, 1288 |
| PleI | GAGTC | 1 cut(s) | 655 |
| PpsI | GAGTC | 1 cut(s) | 655 |
| Ppu21I | YACGTR | 1 cut(s) | 305 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| PscI | ACATGT | 2 cut(s) | 428, 555 |
| PshBI | ATTAAT | 2 cut(s) | 12, 1215 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| PspN4I | GGNNCC | 1 cut(s) | 1044 |
| PspPI | GGNCC | 3 cut(s) | 251, 863, 1043 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| RsaI | GTAC | 4 cut(s) | 138, 196, 632, 807 |
| RsaNI | GTAC | 4 cut(s) | 137, 195, 631, 806 |
| SatI | GCNGC | 4 cut(s) | 300, 747, 1239, 1287 |
| Sau3AI | GATC | 1 cut(s) | 472 |
| Sau96I | GGNCC | 3 cut(s) | 251, 863, 1043 |
| SchI | GAGTC | 1 cut(s) | 656 |
| SduI | GDGCHC | 1 cut(s) | 820 |
| SfaNI | GCATC | 3 cut(s) | 65, 1169, 1267 |
| SfuI | TTCGAA | 1 cut(s) | 895 |
| SinI | GGWCC | 2 cut(s) | 251, 863 |
| SmlI | CTYRAG | 1 cut(s) | 776 |
| SmoI | CTYRAG | 1 cut(s) | 776 |
| SpeI | ACTAGT | 3 cut(s) | 80, 197, 275 |
| SspI | AATATT | 2 cut(s) | 705, 973 |
| SspMI | CTAG | 6 cut(s) | 72, 81, 198, 276, 1025, 1133 |
| StyI | CCWWGG | 1 cut(s) | 124 |
| TaaI | ACNGT | 1 cut(s) | 930 |
| TaiI | ACGT | 2 cut(s) | 307, 811 |
| TaqI | TCGA | 2 cut(s) | 388, 895 |
| TfiI | GAWTC | 2 cut(s) | 75, 382 |
| TseFI | GTSAC | 2 cut(s) | 558, 648 |
| TseI | GCWGC | 4 cut(s) | 299, 746, 1238, 1286 |
| Tsp45I | GTSAC | 2 cut(s) | 558, 648 |
| VpaK11BI | GGWCC | 2 cut(s) | 251, 863 |
| VspI | ATTAAT | 2 cut(s) | 12, 1215 |
| XapI | RAATTY | 8 cut(s) | 222, 414, 452, 507, 829, 904, 1000, 1301 |
| XceI | RCATGY | 2 cut(s) | 432, 559 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 6 cut(s) | 72, 81, 198, 276, 1025, 1133 |
| Zsp2I | ATGCAT | 1 cut(s) | 1282 |