Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1651 |
| AatII | GACGTC | 1 cut(s) | 662 |
| Acc36I | ACCTGC | 2 cut(s) | 343, 1651 |
| AclWI | GGATC | 8 cut(s) | 392, 727, 740, 1493, 1506, 1742, 1755, 1825 |
| AcoI | YGGCCR | 1 cut(s) | 1104 |
| AcsI | RAATTY | 5 cut(s) | 10, 543, 571, 1045, 1784 |
| AcuI | CTGAAG | 1 cut(s) | 462 |
| AcyI | GRCGYC | 1 cut(s) | 659 |
| AfaI | GTAC | 4 cut(s) | 325, 1508, 1876, 2205 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 654, 1769 |
| AflIII | ACRYGT | 2 cut(s) | 883, 1707 |
| AhlI | ACTAGT | 1 cut(s) | 314 |
| AjnI | CCWGG | 2 cut(s) | 499, 2039 |
| Alw21I | GWGCWC | 3 cut(s) | 274, 477, 1083 |
| AlwI | GGATC | 8 cut(s) | 392, 727, 740, 1493, 1506, 1742, 1755, 1825 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 71, 2153, 2174 |
| Ama87I | CYCGRG | 1 cut(s) | 2027 |
| AoxI | GGCC | 5 cut(s) | 625, 1104, 1373, 1428, 2037 |
| ApeKI | GCWGC | 8 cut(s) | 65, 89, 92, 302, 446, 1229, 1838, 2111 |
| ApoI | RAATTY | 5 cut(s) | 10, 543, 571, 1045, 1784 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 197, 572, 822 |
| AspS9I | GGNCC | 1 cut(s) | 1428 |
| AsuHPI | GGTGA | 7 cut(s) | 571, 752, 1184, 1193, 1296, 1632, 1784 |
| AsuII | TTCGAA | 2 cut(s) | 8, 1524 |
| AvaI | CYCGRG | 1 cut(s) | 2027 |
| BamHI | GGATCC | 3 cut(s) | 732, 1498, 1747 |
| BanII | GRGCYC | 2 cut(s) | 477, 1083 |
| BbsI | GAAGAC | 2 cut(s) | 216, 923 |
| Bbv12I | GWGCWC | 3 cut(s) | 274, 477, 1083 |
| BbvI | GCAGC | 8 cut(s) | 76, 77, 104, 314, 433, 1241, 1850, 2098 |
| BccI | CCATC | 2 cut(s) | 460, 1463 |
| BciT130I | CCWGG | 2 cut(s) | 501, 2041 |
| BciVI | GTATCC | 1 cut(s) | 1429 |
| BcuI | ACTAGT | 1 cut(s) | 314 |
| BfmI | CTRYAG | 5 cut(s) | 63, 90, 489, 1752, 1842 |
| BfuAI | ACCTGC | 2 cut(s) | 343, 1651 |
| BfuI | GTATCC | 1 cut(s) | 1429 |
| BisI | GCNGC | 8 cut(s) | 66, 90, 93, 303, 447, 1230, 1839, 2112 |
| BlsI | GCNGC | 8 cut(s) | 67, 91, 94, 304, 448, 1231, 1840, 2113 |
| Bme1390I | CCNGG | 2 cut(s) | 501, 2041 |
| BmeT110I | CYCGRG | 1 cut(s) | 2027 |
| BmgT120I | GGNCC | 1 cut(s) | 1428 |
| BmiI | GGNNCC | 4 cut(s) | 734, 1155, 1500, 1749 |
| BmrFI | CCNGG | 2 cut(s) | 501, 2041 |
| BmrI | ACTGGG | 1 cut(s) | 1729 |
| BmsI | GCATC | 7 cut(s) | 121, 1341, 1460, 1646, 2132, 2146, 2168 |
| BmuI | ACTGGG | 1 cut(s) | 1729 |
| BpiI | GAAGAC | 2 cut(s) | 216, 923 |
| BpmI | CTGGAG | 1 cut(s) | 390 |
| Bpu14I | TTCGAA | 2 cut(s) | 8, 1524 |
| BpuEI | CTTGAG | 3 cut(s) | 598, 809, 1294 |
| Bsa29I | ATCGAT | 1 cut(s) | 1458 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2170 |
| BsaHI | GRCGYC | 1 cut(s) | 659 |
| BsaJI | CCNNGG | 4 cut(s) | 763, 1431, 1502, 2028 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 357, 387 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 654, 1769 |
| Bse1I | ACTGG | 3 cut(s) | 407, 812, 1724 |
| Bse3DI | GCAATG | 1 cut(s) | 1416 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2170 |
| BseBI | CCWGG | 2 cut(s) | 501, 2041 |
| BseCI | ATCGAT | 1 cut(s) | 1458 |
| BseDI | CCNNGG | 4 cut(s) | 763, 1431, 1502, 2028 |
| BseGI | GGATG | 5 cut(s) | 400, 475, 588, 1332, 1451 |
| BseJI | GATNNNNATC | 1 cut(s) | 2170 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 654, 1769 |
| BseMI | GCAATG | 1 cut(s) | 1416 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BseNI | ACTGG | 3 cut(s) | 407, 812, 1724 |
| BseRI | GAGGAG | 1 cut(s) | 260 |
| BseXI | GCAGC | 8 cut(s) | 76, 77, 104, 314, 433, 1241, 1850, 2098 |
| BseYI | CCCAGC | 1 cut(s) | 183 |
| BsgI | GTGCAG | 2 cut(s) | 686, 1014 |
| BshFI | GGCC | 5 cut(s) | 627, 1106, 1375, 1430, 2039 |
| BshVI | ATCGAT | 1 cut(s) | 1458 |
| BsiHKAI | GWGCWC | 3 cut(s) | 274, 477, 1083 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2027 |
| BslFI | GGGAC | 1 cut(s) | 90 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 654, 1769 |
| BsmFI | GGGAC | 1 cut(s) | 90 |
| BsmI | GAATGC | 1 cut(s) | 1313 |
| BsnI | GGCC | 5 cut(s) | 627, 1106, 1375, 1430, 2039 |
| BsoBI | CYCGRG | 1 cut(s) | 2027 |
| Bsp119I | TTCGAA | 2 cut(s) | 8, 1524 |
| Bsp1286I | GDGCHC | 3 cut(s) | 274, 477, 1083 |
| Bsp143I | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| BspANI | GGCC | 5 cut(s) | 627, 1106, 1375, 1430, 2039 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspDI | ATCGAT | 1 cut(s) | 1458 |
| BspLI | GGNNCC | 4 cut(s) | 734, 1155, 1500, 1749 |
| BspMAI | CTGCAG | 2 cut(s) | 67, 94 |
| BspMI | ACCTGC | 2 cut(s) | 343, 1651 |
| BspPI | GGATC | 8 cut(s) | 392, 727, 740, 1493, 1506, 1742, 1755, 1825 |
| BspT104I | TTCGAA | 2 cut(s) | 8, 1524 |
| BsrDI | GCAATG | 1 cut(s) | 1416 |
| BsrI | ACTGG | 3 cut(s) | 407, 812, 1724 |
| BssECI | CCNNGG | 4 cut(s) | 763, 1431, 1502, 2028 |
| BssMI | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| BssNI | GRCGYC | 1 cut(s) | 659 |
| BssT1I | CCWWGG | 3 cut(s) | 763, 1431, 1502 |
| Bst2UI | CCWGG | 2 cut(s) | 501, 2041 |
| Bst4CI | ACNGT | 5 cut(s) | 454, 1139, 1356, 1676, 1879 |
| Bst6I | CTCTTC | 5 cut(s) | 597, 605, 1170, 1217, 1904 |
| BstACI | GRCGYC | 1 cut(s) | 659 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1643 |
| BstBI | TTCGAA | 2 cut(s) | 8, 1524 |
| BstC8I | GCNNGC | 2 cut(s) | 436, 625 |
| BstDEI | CTNAG | 3 cut(s) | 150, 1122, 1250 |
| BstF5I | GGATG | 5 cut(s) | 400, 475, 588, 1332, 1451 |
| BstKTI | GATC | 7 cut(s) | 225, 400, 735, 1501, 1750, 1820, 2168 |
| BstMBI | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1643, 1844, 2004, 2108, 2120, 2156 |
| BstNI | CCWGG | 2 cut(s) | 501, 2041 |
| BstNSI | RCATGY | 4 cut(s) | 438, 887, 1711, 2216 |
| BstSCI | CCNGG | 2 cut(s) | 499, 2039 |
| BstSFI | CTRYAG | 5 cut(s) | 63, 90, 489, 1752, 1842 |
| BstV1I | GCAGC | 8 cut(s) | 76, 77, 104, 314, 433, 1241, 1850, 2098 |
| BstV2I | GAAGAC | 2 cut(s) | 216, 923 |
| BstX2I | RGATCY | 3 cut(s) | 732, 1498, 1747 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1041 |
| BstYI | RGATCY | 3 cut(s) | 732, 1498, 1747 |
| Bsu15I | ATCGAT | 1 cut(s) | 1458 |
| BsuI | GTATCC | 1 cut(s) | 1429 |
| BsuRI | GGCC | 5 cut(s) | 627, 1106, 1375, 1430, 2039 |
| BsuTUI | ATCGAT | 1 cut(s) | 1458 |
| BtgZI | GCGATG | 1 cut(s) | 1558 |
| BtsCI | GGATG | 5 cut(s) | 400, 475, 588, 1332, 1451 |
| BtsIMutI | CAGTG | 2 cut(s) | 438, 1884 |
| BveI | ACCTGC | 2 cut(s) | 343, 1651 |
| Cac8I | GCNNGC | 2 cut(s) | 436, 625 |
| CaiI | CAGNNNCTG | 3 cut(s) | 71, 2153, 2174 |
| Cfr13I | GGNCC | 1 cut(s) | 1428 |
| ClaI | ATCGAT | 1 cut(s) | 1458 |
| Csp6I | GTAC | 4 cut(s) | 324, 1507, 1875, 2204 |
| CviAII | CATG | 6 cut(s) | 435, 549, 682, 884, 1708, 2213 |
| CviQI | GTAC | 4 cut(s) | 324, 1507, 1875, 2204 |
| DdeI | CTNAG | 3 cut(s) | 150, 1122, 1250 |
| DpnI | GATC | 7 cut(s) | 224, 399, 734, 1500, 1749, 1819, 2167 |
| DpnII | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| EaeI | YGGCCR | 1 cut(s) | 1104 |
| Eam1104I | CTCTTC | 5 cut(s) | 597, 605, 1170, 1217, 1904 |
| EarI | CTCTTC | 5 cut(s) | 597, 605, 1170, 1217, 1904 |
| Ecl136II | GAGCTC | 2 cut(s) | 475, 1081 |
| Eco130I | CCWWGG | 3 cut(s) | 763, 1431, 1502 |
| Eco147I | AGGCCT | 1 cut(s) | 1375 |
| Eco24I | GRGCYC | 2 cut(s) | 477, 1083 |
| Eco32I | GATATC | 2 cut(s) | 1548, 1739 |
| Eco53kI | GAGCTC | 2 cut(s) | 475, 1081 |
| Eco57I | CTGAAG | 1 cut(s) | 462 |
| Eco88I | CYCGRG | 1 cut(s) | 2027 |
| EcoICRI | GAGCTC | 2 cut(s) | 475, 1081 |
| EcoRI | GAATTC | 3 cut(s) | 10, 1045, 1784 |
| EcoRII | CCWGG | 2 cut(s) | 499, 2039 |
| EcoRV | GATATC | 2 cut(s) | 1548, 1739 |
| EcoT14I | CCWWGG | 3 cut(s) | 763, 1431, 1502 |
| EcoT22I | ATGCAT | 3 cut(s) | 726, 2161, 2184 |
| EcoT38I | GRGCYC | 2 cut(s) | 477, 1083 |
| ErhI | CCWWGG | 3 cut(s) | 763, 1431, 1502 |
| FaeI | CATG | 6 cut(s) | 438, 552, 685, 887, 1711, 2216 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 151, 183, 560, 592, 2098, 2130 |
| FaqI | GGGAC | 1 cut(s) | 90 |
| FatI | CATG | 6 cut(s) | 434, 548, 681, 883, 1707, 2212 |
| Fnu4HI | GCNGC | 8 cut(s) | 66, 90, 93, 303, 447, 1230, 1839, 2112 |
| FokI | GGATG | 5 cut(s) | 407, 482, 595, 1319, 1438 |
| FriOI | GRGCYC | 2 cut(s) | 477, 1083 |
| Fsp4HI | GCNGC | 8 cut(s) | 66, 90, 93, 303, 447, 1230, 1839, 2112 |
| GluI | GCNGC | 8 cut(s) | 66, 90, 93, 303, 447, 1230, 1839, 2112 |
| GsaI | CCCAGC | 1 cut(s) | 187 |
| GsuI | CTGGAG | 1 cut(s) | 390 |
| HaeIII | GGCC | 5 cut(s) | 627, 1106, 1375, 1430, 2039 |
| Hin1I | GRCGYC | 1 cut(s) | 659 |
| Hin1II | CATG | 6 cut(s) | 438, 552, 685, 887, 1711, 2216 |
| HincII | GTYRAC | 2 cut(s) | 910, 1732 |
| HindII | GTYRAC | 2 cut(s) | 910, 1732 |
| HinfI | GANTC | 7 cut(s) | 118, 193, 504, 791, 1118, 1942, 2171 |
| HpaI | GTTAAC | 1 cut(s) | 910 |
| HphI | GGTGA | 7 cut(s) | 571, 752, 1184, 1193, 1296, 1632, 1784 |
| Hpy166II | GTNNAC | 2 cut(s) | 910, 1732 |
| Hpy188I | TCNGA | 4 cut(s) | 123, 222, 1932, 2170 |
| Hpy188III | TCNNGA | 5 cut(s) | 577, 1157, 1692, 2027, 2163 |
| Hpy8I | GTNNAC | 2 cut(s) | 910, 1732 |
| Hpy99I | CGWCG | 2 cut(s) | 664, 1112 |
| HpyAV | CCTTC | 2 cut(s) | 550, 2092 |
| HpyCH4III | ACNGT | 5 cut(s) | 454, 1139, 1356, 1676, 1879 |
| HpyCH4IV | ACGT | 2 cut(s) | 103, 659 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1643, 1844, 2004, 2108, 2120, 2156 |
| HpyF3I | CTNAG | 3 cut(s) | 150, 1122, 1250 |
| HpySE526I | ACGT | 2 cut(s) | 103, 659 |
| Hsp92I | GRCGYC | 1 cut(s) | 659 |
| Hsp92II | CATG | 6 cut(s) | 438, 552, 685, 887, 1711, 2216 |
| KspAI | GTTAAC | 1 cut(s) | 910 |
| Kzo9I | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| LmnI | GCTCC | 3 cut(s) | 73, 480, 1078 |
| Lsp1109I | GCAGC | 8 cut(s) | 76, 77, 104, 314, 433, 1241, 1850, 2098 |
| LweI | GCATC | 7 cut(s) | 121, 1341, 1460, 1646, 2132, 2146, 2168 |
| MaeII | ACGT | 2 cut(s) | 103, 659 |
| MaeIII | GTNAC | 5 cut(s) | 257, 1133, 1413, 1670, 1676 |
| MalI | GATC | 7 cut(s) | 224, 399, 734, 1500, 1749, 1819, 2167 |
| MboI | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| MflI | RGATCY | 3 cut(s) | 732, 1498, 1747 |
| MhlI | GDGCHC | 3 cut(s) | 274, 477, 1083 |
| MlyI | GAGTC | 4 cut(s) | 127, 800, 1112, 1936 |
| MmeI | TCCRAC | 2 cut(s) | 16, 1044 |
| Mph1103I | ATGCAT | 3 cut(s) | 726, 2161, 2184 |
| MroXI | GAANNNNTTC | 3 cut(s) | 197, 572, 822 |
| MseI | TTAA | 7 cut(s) | 689, 738, 909, 1025, 1467, 1518, 1560 |
| MslI | CAYNNNNRTG | 2 cut(s) | 917, 1541 |
| MspA1I | CMGCKG | 1 cut(s) | 1841 |
| MspR9I | CCNGG | 2 cut(s) | 501, 2041 |
| Mva1269I | GAATGC | 1 cut(s) | 1313 |
| MvaI | CCWGG | 2 cut(s) | 501, 2041 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1643, 1844, 2004, 2108, 2120, 2156 |
| NdeII | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| NlaIII | CATG | 6 cut(s) | 438, 552, 685, 887, 1711, 2216 |
| NlaIV | GGNNCC | 4 cut(s) | 734, 1155, 1500, 1749 |
| NmuCI | GTSAC | 3 cut(s) | 257, 1413, 1676 |
| NsiI | ATGCAT | 3 cut(s) | 726, 2161, 2184 |
| NspI | RCATGY | 4 cut(s) | 438, 887, 1711, 2216 |
| NspV | TTCGAA | 2 cut(s) | 8, 1524 |
| PaeI | GCATGC | 1 cut(s) | 438 |
| PaqCI | CACCTGC | 1 cut(s) | 1651 |
| PceI | AGGCCT | 1 cut(s) | 1375 |
| PciI | ACATGT | 2 cut(s) | 883, 1707 |
| PctI | GAATGC | 1 cut(s) | 1313 |
| PdmI | GAANNNNTTC | 3 cut(s) | 197, 572, 822 |
| PfeI | GAWTC | 3 cut(s) | 193, 504, 2171 |
| PkrI | GCNGC | 8 cut(s) | 67, 91, 94, 304, 448, 1231, 1840, 2113 |
| PleI | GAGTC | 4 cut(s) | 126, 799, 1112, 1936 |
| PpsI | GAGTC | 4 cut(s) | 126, 799, 1112, 1936 |
| PscI | ACATGT | 2 cut(s) | 883, 1707 |
| Psp124BI | GAGCTC | 2 cut(s) | 477, 1083 |
| Psp6I | CCWGG | 2 cut(s) | 499, 2039 |
| PspFI | CCCAGC | 1 cut(s) | 183 |
| PspGI | CCWGG | 2 cut(s) | 499, 2039 |
| PspN4I | GGNNCC | 4 cut(s) | 734, 1155, 1500, 1749 |
| PspPI | GGNCC | 1 cut(s) | 1428 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 662, 694 |
| PstI | CTGCAG | 2 cut(s) | 67, 94 |
| PstNI | CAGNNNCTG | 3 cut(s) | 71, 2153, 2174 |
| PsuI | RGATCY | 3 cut(s) | 732, 1498, 1747 |
| PvuII | CAGCTG | 1 cut(s) | 1841 |
| RsaI | GTAC | 4 cut(s) | 325, 1508, 1876, 2205 |
| RsaNI | GTAC | 4 cut(s) | 324, 1507, 1875, 2204 |
| RseI | CAYNNNNRTG | 2 cut(s) | 917, 1541 |
| SacI | GAGCTC | 2 cut(s) | 477, 1083 |
| SaqAI | TTAA | 7 cut(s) | 689, 738, 909, 1025, 1467, 1518, 1560 |
| SatI | GCNGC | 8 cut(s) | 66, 90, 93, 303, 447, 1230, 1839, 2112 |
| Sau3AI | GATC | 7 cut(s) | 222, 397, 732, 1498, 1747, 1817, 2165 |
| Sau96I | GGNCC | 1 cut(s) | 1428 |
| SchI | GAGTC | 4 cut(s) | 127, 800, 1112, 1936 |
| ScrFI | CCNGG | 2 cut(s) | 501, 2041 |
| SduI | GDGCHC | 3 cut(s) | 274, 477, 1083 |
| SfaNI | GCATC | 7 cut(s) | 121, 1341, 1460, 1646, 2132, 2146, 2168 |
| SfcI | CTRYAG | 5 cut(s) | 63, 90, 489, 1752, 1842 |
| SfuI | TTCGAA | 2 cut(s) | 8, 1524 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 917, 1541 |
| SmlI | CTYRAG | 3 cut(s) | 577, 788, 1273 |
| SmoI | CTYRAG | 3 cut(s) | 577, 788, 1273 |
| SpeI | ACTAGT | 1 cut(s) | 314 |
| SphI | GCATGC | 1 cut(s) | 438 |
| SseBI | AGGCCT | 1 cut(s) | 1375 |
| SstI | GAGCTC | 2 cut(s) | 477, 1083 |
| StuI | AGGCCT | 1 cut(s) | 1375 |
| StyD4I | CCNGG | 2 cut(s) | 499, 2039 |
| StyI | CCWWGG | 3 cut(s) | 763, 1431, 1502 |
| TaaI | ACNGT | 5 cut(s) | 454, 1139, 1356, 1676, 1879 |
| TaiI | ACGT | 2 cut(s) | 106, 662 |
| TaqI | TCGA | 7 cut(s) | 8, 225, 840, 1002, 1458, 1524, 2144 |
| TaqII | GACCGA | 1 cut(s) | 1749 |
| TatI | WGTACW | 1 cut(s) | 1874 |
| TfiI | GAWTC | 3 cut(s) | 193, 504, 2171 |
| Tru1I | TTAA | 7 cut(s) | 689, 738, 909, 1025, 1467, 1518, 1560 |
| Tru9I | TTAA | 7 cut(s) | 689, 738, 909, 1025, 1467, 1518, 1560 |
| TscAI | CASTG | 2 cut(s) | 445, 1884 |
| TseFI | GTSAC | 3 cut(s) | 257, 1413, 1676 |
| TseI | GCWGC | 8 cut(s) | 65, 89, 92, 302, 446, 1229, 1838, 2111 |
| Tsp45I | GTSAC | 3 cut(s) | 257, 1413, 1676 |
| TspDTI | ATGAA | 8 cut(s) | 353, 691, 923, 942, 1158, 1278, 1395, 1569 |
| TspRI | CASTG | 2 cut(s) | 445, 1884 |
| XapI | RAATTY | 5 cut(s) | 10, 543, 571, 1045, 1784 |
| XceI | RCATGY | 4 cut(s) | 438, 887, 1711, 2216 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1325 |
| XmnI | GAANNNNTTC | 3 cut(s) | 197, 572, 822 |
| ZraI | GACGTC | 1 cut(s) | 660 |
| Zsp2I | ATGCAT | 3 cut(s) | 726, 2161, 2184 |