Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 73 - 156 | 6.2e-26 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 339 |
| AccI | GTMKAC | 1 cut(s) | 222 |
| AclWI | GGATC | 5 cut(s) | 65, 113, 398, 411, 525 |
| AcuI | CTGAAG | 1 cut(s) | 267 |
| AcyI | GRCGYC | 1 cut(s) | 336 |
| AfaI | GTAC | 1 cut(s) | 491 |
| AgsI | TTSAA | 4 cut(s) | 178, 239, 412, 484 |
| AluBI | AGCT | 8 cut(s) | 46, 181, 242, 353, 416, 514, 532, 579 |
| AluI | AGCT | 8 cut(s) | 46, 181, 242, 353, 416, 514, 532, 579 |
| Alw26I | GTCTC | 1 cut(s) | 458 |
| AlwI | GGATC | 5 cut(s) | 65, 113, 398, 411, 525 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 554 |
| ApeKI | GCWGC | 4 cut(s) | 43, 77, 80, 155 |
| AspA2I | CCTAGG | 1 cut(s) | 428 |
| AsuHPI | GGTGA | 2 cut(s) | 16, 571 |
| AvrII | CCTAGG | 1 cut(s) | 428 |
| BamHI | GGATCC | 1 cut(s) | 403 |
| BbsI | GAAGAC | 1 cut(s) | 255 |
| BbvI | GCAGC | 4 cut(s) | 55, 64, 67, 142 |
| BccI | CCATC | 1 cut(s) | 427 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BcoDI | GTCTC | 1 cut(s) | 458 |
| BfaI | CTAG | 1 cut(s) | 429 |
| BisI | GCNGC | 4 cut(s) | 44, 78, 81, 156 |
| BlnI | CCTAGG | 1 cut(s) | 428 |
| BlsI | GCNGC | 4 cut(s) | 45, 79, 82, 157 |
| BmiI | GGNNCC | 1 cut(s) | 405 |
| BmsI | GCATC | 1 cut(s) | 167 |
| BpiI | GAAGAC | 1 cut(s) | 255 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 131, 163 |
| Bpu10I | CCTNAGC | 2 cut(s) | 182, 330 |
| BpuEI | CTTGAG | 1 cut(s) | 554 |
| BsaHI | GRCGYC | 1 cut(s) | 336 |
| BsaJI | CCNNGG | 3 cut(s) | 360, 385, 428 |
| Bse1I | ACTGG | 1 cut(s) | 546 |
| BseDI | CCNNGG | 3 cut(s) | 360, 385, 428 |
| BseGI | GGATG | 2 cut(s) | 438, 577 |
| BseMII | CTCAG | 3 cut(s) | 196, 469, 578 |
| BseNI | ACTGG | 1 cut(s) | 546 |
| BseRI | GAGGAG | 1 cut(s) | 155 |
| BseXI | GCAGC | 4 cut(s) | 55, 64, 67, 142 |
| BsgI | GTGCAG | 1 cut(s) | 66 |
| BslFI | GGGAC | 1 cut(s) | 227 |
| BsmAI | GTCTC | 1 cut(s) | 458 |
| BsmFI | GGGAC | 1 cut(s) | 227 |
| Bsp143I | GATC | 4 cut(s) | 70, 118, 403, 517 |
| BspCNI | CTCAG | 3 cut(s) | 195, 468, 577 |
| BspLI | GGNNCC | 1 cut(s) | 405 |
| BspPI | GGATC | 5 cut(s) | 65, 113, 398, 411, 525 |
| BsrI | ACTGG | 1 cut(s) | 546 |
| BssECI | CCNNGG | 3 cut(s) | 360, 385, 428 |
| BssMI | GATC | 4 cut(s) | 70, 118, 403, 517 |
| BssNI | GRCGYC | 1 cut(s) | 336 |
| BssT1I | CCWWGG | 2 cut(s) | 385, 428 |
| Bst4CI | ACNGT | 1 cut(s) | 361 |
| BstACI | GRCGYC | 1 cut(s) | 336 |
| BstDEI | CTNAG | 5 cut(s) | 182, 330, 455, 504, 564 |
| BstDSI | CCRYGG | 1 cut(s) | 360 |
| BstF5I | GGATG | 2 cut(s) | 438, 577 |
| BstKTI | GATC | 4 cut(s) | 73, 121, 406, 520 |
| BstMAI | GTCTC | 1 cut(s) | 458 |
| BstMBI | GATC | 4 cut(s) | 70, 118, 403, 517 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 86, 350 |
| BstNSI | RCATGY | 1 cut(s) | 155 |
| BstV1I | GCAGC | 4 cut(s) | 55, 64, 67, 142 |
| BstV2I | GAAGAC | 1 cut(s) | 255 |
| BstX2I | RGATCY | 2 cut(s) | 403, 517 |
| BstYI | RGATCY | 2 cut(s) | 403, 517 |
| BtgI | CCRYGG | 1 cut(s) | 360 |
| BtsCI | GGATG | 2 cut(s) | 438, 577 |
| BtsIMutI | CAGTG | 1 cut(s) | 463 |
| CaiI | CAGNNNCTG | 1 cut(s) | 554 |
| Csp6I | GTAC | 1 cut(s) | 490 |
| CviAII | CATG | 3 cut(s) | 113, 152, 282 |
| CviQI | GTAC | 1 cut(s) | 490 |
| DdeI | CTNAG | 5 cut(s) | 182, 330, 455, 504, 564 |
| DpnI | GATC | 4 cut(s) | 72, 120, 405, 519 |
| DpnII | GATC | 4 cut(s) | 70, 118, 403, 517 |
| Eco130I | CCWWGG | 2 cut(s) | 385, 428 |
| Eco32I | GATATC | 1 cut(s) | 308 |
| Eco57I | CTGAAG | 1 cut(s) | 267 |
| EcoRV | GATATC | 1 cut(s) | 308 |
| EcoT14I | CCWWGG | 2 cut(s) | 385, 428 |
| ErhI | CCWWGG | 2 cut(s) | 385, 428 |
| FaeI | CATG | 3 cut(s) | 116, 155, 285 |
| FaiI | YATR | 5 cut(s) | 14, 114, 153, 283, 525 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 20, 52, 323, 355, 568 |
| FaqI | GGGAC | 1 cut(s) | 227 |
| FatI | CATG | 3 cut(s) | 112, 151, 281 |
| FblI | GTMKAC | 1 cut(s) | 222 |
| Fnu4HI | GCNGC | 4 cut(s) | 44, 78, 81, 156 |
| FokI | GGATG | 2 cut(s) | 445, 584 |
| Fsp4HI | GCNGC | 4 cut(s) | 44, 78, 81, 156 |
| FspBI | CTAG | 1 cut(s) | 429 |
| GluI | GCNGC | 4 cut(s) | 44, 78, 81, 156 |
| Hin1I | GRCGYC | 1 cut(s) | 336 |
| Hin1II | CATG | 3 cut(s) | 116, 155, 285 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HindIII | AAGCTT | 2 cut(s) | 240, 414 |
| HinfI | GANTC | 6 cut(s) | 146, 166, 371, 545, 551, 562 |
| HphI | GGTGA | 2 cut(s) | 16, 571 |
| Hpy166II | GTNNAC | 1 cut(s) | 223 |
| Hpy188I | TCNGA | 4 cut(s) | 70, 247, 370, 550 |
| Hpy188III | TCNNGA | 2 cut(s) | 236, 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 223 |
| HpyAV | CCTTC | 1 cut(s) | 283 |
| HpyCH4III | ACNGT | 1 cut(s) | 361 |
| HpyCH4IV | ACGT | 1 cut(s) | 336 |
| HpyCH4V | TGCA | 3 cut(s) | 83, 158, 257 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 86, 350 |
| HpyF3I | CTNAG | 5 cut(s) | 182, 330, 455, 504, 564 |
| HpySE526I | ACGT | 1 cut(s) | 336 |
| Hsp92I | GRCGYC | 1 cut(s) | 336 |
| Hsp92II | CATG | 3 cut(s) | 116, 155, 285 |
| Kzo9I | GATC | 4 cut(s) | 70, 118, 403, 517 |
| LpnPI | CCDG | 9 cut(s) | 87, 169, 267, 284, 363, 431, 500, 527, 551 |
| Lsp1109I | GCAGC | 4 cut(s) | 55, 64, 67, 142 |
| LweI | GCATC | 1 cut(s) | 167 |
| MaeI | CTAG | 1 cut(s) | 429 |
| MaeII | ACGT | 1 cut(s) | 336 |
| MaeIII | GTNAC | 1 cut(s) | 559 |
| MalI | GATC | 4 cut(s) | 72, 120, 405, 519 |
| MboI | GATC | 4 cut(s) | 70, 118, 403, 517 |
| MboII | GAAGA | 3 cut(s) | 40, 43, 260 |
| MflI | RGATCY | 2 cut(s) | 403, 517 |
| MlyI | GAGTC | 4 cut(s) | 140, 175, 380, 556 |
| MnlI | CCTC | 5 cut(s) | 100, 120, 133, 136, 433 |
| MseI | TTAA | 4 cut(s) | 278, 422, 467, 586 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 86, 350 |
| NdeII | GATC | 4 cut(s) | 70, 118, 403, 517 |
| NlaIII | CATG | 3 cut(s) | 116, 155, 285 |
| NlaIV | GGNNCC | 1 cut(s) | 405 |
| NmuCI | GTSAC | 1 cut(s) | 559 |
| NspI | RCATGY | 1 cut(s) | 155 |
| PfeI | GAWTC | 2 cut(s) | 545, 551 |
| PflFI | GACNNNGTC | 1 cut(s) | 218 |
| PkrI | GCNGC | 4 cut(s) | 45, 79, 82, 157 |
| PleI | GAGTC | 4 cut(s) | 140, 174, 379, 556 |
| PpsI | GAGTC | 4 cut(s) | 140, 174, 379, 556 |
| PspN4I | GGNNCC | 1 cut(s) | 405 |
| PstNI | CAGNNNCTG | 1 cut(s) | 554 |
| PsuI | RGATCY | 2 cut(s) | 403, 517 |
| PsyI | GACNNNGTC | 1 cut(s) | 218 |
| RsaI | GTAC | 1 cut(s) | 491 |
| RsaNI | GTAC | 1 cut(s) | 490 |
| SalI | GTCGAC | 1 cut(s) | 221 |
| SaqAI | TTAA | 4 cut(s) | 278, 422, 467, 586 |
| SatI | GCNGC | 4 cut(s) | 44, 78, 81, 156 |
| Sau3AI | GATC | 4 cut(s) | 70, 118, 403, 517 |
| SchI | GAGTC | 4 cut(s) | 140, 175, 380, 556 |
| SfaNI | GCATC | 1 cut(s) | 167 |
| SmlI | CTYRAG | 1 cut(s) | 533 |
| SmoI | CTYRAG | 1 cut(s) | 533 |
| SspMI | CTAG | 1 cut(s) | 429 |
| StyI | CCWWGG | 2 cut(s) | 385, 428 |
| TaaI | ACNGT | 1 cut(s) | 361 |
| TaiI | ACGT | 1 cut(s) | 339 |
| TaqI | TCGA | 2 cut(s) | 18, 222 |
| TatI | WGTACW | 1 cut(s) | 489 |
| TfiI | GAWTC | 2 cut(s) | 545, 551 |
| Tru1I | TTAA | 4 cut(s) | 278, 422, 467, 586 |
| Tru9I | TTAA | 4 cut(s) | 278, 422, 467, 586 |
| TscAI | CASTG | 1 cut(s) | 463 |
| TseFI | GTSAC | 1 cut(s) | 559 |
| TseI | GCWGC | 4 cut(s) | 43, 77, 80, 155 |
| Tsp45I | GTSAC | 1 cut(s) | 559 |
| TspDTI | ATGAA | 2 cut(s) | 36, 588 |
| TspRI | CASTG | 1 cut(s) | 463 |
| Tth111I | GACNNNGTC | 1 cut(s) | 218 |
| XceI | RCATGY | 1 cut(s) | 155 |
| XmaJI | CCTAGG | 1 cut(s) | 428 |
| XmiI | GTMKAC | 1 cut(s) | 222 |
| XspI | CTAG | 1 cut(s) | 429 |
| ZraI | GACGTC | 1 cut(s) | 337 |