Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 1 - 73 | 3.5e-18 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 41, 146, 159 |
| AcsI | RAATTY | 1 cut(s) | 70 |
| AfaI | GTAC | 2 cut(s) | 161, 173 |
| AgsI | TTSAA | 1 cut(s) | 75 |
| AluBI | AGCT | 3 cut(s) | 118, 140, 166 |
| AluI | AGCT | 3 cut(s) | 118, 140, 166 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Alw44I | GTGCAC | 1 cut(s) | 4 |
| AlwI | GGATC | 3 cut(s) | 41, 146, 159 |
| ApaLI | GTGCAC | 1 cut(s) | 4 |
| ApeKI | GCWGC | 2 cut(s) | 166, 199 |
| ApoI | RAATTY | 1 cut(s) | 70 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 86 |
| AsuNHI | GCTAGC | 1 cut(s) | 59 |
| BaeGI | GKGCMC | 1 cut(s) | 8 |
| BamHI | GGATCC | 1 cut(s) | 151 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BbvI | GCAGC | 2 cut(s) | 153, 211 |
| BccI | CCATC | 1 cut(s) | 220 |
| BfaI | CTAG | 1 cut(s) | 60 |
| BisI | GCNGC | 2 cut(s) | 167, 200 |
| BlsI | GCNGC | 2 cut(s) | 168, 201 |
| BmiI | GGNNCC | 1 cut(s) | 153 |
| BmtI | GCTAGC | 1 cut(s) | 63 |
| BpuEI | CTTGAG | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 2 cut(s) | 155, 213 |
| Bse3DI | GCAATG | 1 cut(s) | 50 |
| BseDI | CCNNGG | 2 cut(s) | 155, 213 |
| BseGI | GGATG | 2 cut(s) | 49, 226 |
| BseMI | GCAATG | 1 cut(s) | 50 |
| BseRI | GAGGAG | 1 cut(s) | 128 |
| BseSI | GKGCMC | 1 cut(s) | 8 |
| BseXI | GCAGC | 2 cut(s) | 153, 211 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp143I | GATC | 2 cut(s) | 46, 151 |
| Bsp19I | CCATGG | 1 cut(s) | 213 |
| BspLI | GGNNCC | 1 cut(s) | 153 |
| BspOI | GCTAGC | 1 cut(s) | 63 |
| BspPI | GGATC | 3 cut(s) | 41, 146, 159 |
| BsrDI | GCAATG | 1 cut(s) | 50 |
| BssECI | CCNNGG | 2 cut(s) | 155, 213 |
| BssMI | GATC | 2 cut(s) | 46, 151 |
| BssT1I | CCWWGG | 2 cut(s) | 155, 213 |
| BstC8I | GCNNGC | 2 cut(s) | 57, 61 |
| BstDSI | CCRYGG | 1 cut(s) | 213 |
| BstF5I | GGATG | 2 cut(s) | 49, 226 |
| BstKTI | GATC | 2 cut(s) | 49, 154 |
| BstMBI | GATC | 2 cut(s) | 46, 151 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 115 |
| BstSLI | GKGCMC | 1 cut(s) | 8 |
| BstV1I | GCAGC | 2 cut(s) | 153, 211 |
| BstX2I | RGATCY | 1 cut(s) | 151 |
| BstYI | RGATCY | 1 cut(s) | 151 |
| BtgI | CCRYGG | 1 cut(s) | 213 |
| BtsCI | GGATG | 2 cut(s) | 49, 226 |
| Cac8I | GCNNGC | 2 cut(s) | 57, 61 |
| Csp6I | GTAC | 2 cut(s) | 160, 172 |
| CviAII | CATG | 1 cut(s) | 214 |
| CviJI | RGCY | 4 cut(s) | 109, 118, 140, 166 |
| CviKI_1 | RGCY | 4 cut(s) | 109, 118, 140, 166 |
| CviQI | GTAC | 2 cut(s) | 160, 172 |
| DpnI | GATC | 2 cut(s) | 48, 153 |
| DpnII | GATC | 2 cut(s) | 46, 151 |
| Eco130I | CCWWGG | 2 cut(s) | 155, 213 |
| EcoRI | GAATTC | 1 cut(s) | 70 |
| EcoT14I | CCWWGG | 2 cut(s) | 155, 213 |
| ErhI | CCWWGG | 2 cut(s) | 155, 213 |
| FaeI | CATG | 1 cut(s) | 217 |
| FaiI | YATR | 2 cut(s) | 14, 215 |
| FatI | CATG | 1 cut(s) | 213 |
| Fnu4HI | GCNGC | 2 cut(s) | 167, 200 |
| FokI | GGATG | 2 cut(s) | 56, 233 |
| Fsp4HI | GCNGC | 2 cut(s) | 167, 200 |
| FspBI | CTAG | 1 cut(s) | 60 |
| GluI | GCNGC | 2 cut(s) | 167, 200 |
| Hin1II | CATG | 1 cut(s) | 217 |
| HinfI | GANTC | 1 cut(s) | 127 |
| Hpy166II | GTNNAC | 1 cut(s) | 6 |
| Hpy8I | GTNNAC | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 2 cut(s) | 6, 199 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 115 |
| Hsp92II | CATG | 1 cut(s) | 217 |
| Kzo9I | GATC | 2 cut(s) | 46, 151 |
| LmnI | GCTCC | 1 cut(s) | 115 |
| Lsp1109I | GCAGC | 2 cut(s) | 153, 211 |
| MaeI | CTAG | 1 cut(s) | 60 |
| MalI | GATC | 2 cut(s) | 48, 153 |
| MboI | GATC | 2 cut(s) | 46, 151 |
| MboII | GAAGA | 2 cut(s) | 91, 94 |
| MflI | RGATCY | 1 cut(s) | 151 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MluCI | AATT | 2 cut(s) | 70, 194 |
| MmeI | TCCRAC | 1 cut(s) | 129 |
| MnlI | CCTC | 2 cut(s) | 99, 106 |
| MroXI | GAANNNNTTC | 1 cut(s) | 86 |
| MseI | TTAA | 1 cut(s) | 36 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 115 |
| NcoI | CCATGG | 1 cut(s) | 213 |
| NdeII | GATC | 2 cut(s) | 46, 151 |
| NheI | GCTAGC | 1 cut(s) | 59 |
| NlaIII | CATG | 1 cut(s) | 217 |
| NlaIV | GGNNCC | 1 cut(s) | 153 |
| PdmI | GAANNNNTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 1 cut(s) | 127 |
| PkrI | GCNGC | 2 cut(s) | 168, 201 |
| PspN4I | GGNNCC | 1 cut(s) | 153 |
| PsuI | RGATCY | 1 cut(s) | 151 |
| RsaI | GTAC | 2 cut(s) | 161, 173 |
| RsaNI | GTAC | 2 cut(s) | 160, 172 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 2 cut(s) | 167, 200 |
| Sau3AI | GATC | 2 cut(s) | 46, 151 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SetI | ASST | 4 cut(s) | 120, 142, 161, 168 |
| SmlI | CTYRAG | 1 cut(s) | 110 |
| SmoI | CTYRAG | 1 cut(s) | 110 |
| Sse9I | AATT | 2 cut(s) | 70, 194 |
| SspI | AATATT | 2 cut(s) | 98, 182 |
| SspMI | CTAG | 1 cut(s) | 60 |
| StyI | CCWWGG | 2 cut(s) | 155, 213 |
| TaqI | TCGA | 1 cut(s) | 90 |
| TasI | AATT | 2 cut(s) | 70, 194 |
| TatI | WGTACW | 1 cut(s) | 171 |
| TfiI | GAWTC | 1 cut(s) | 127 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseI | GCWGC | 2 cut(s) | 166, 199 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| VneI | GTGCAC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 70 |
| XmnI | GAANNNNTTC | 1 cut(s) | 86 |
| XspI | CTAG | 1 cut(s) | 60 |