Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 836 |
| AccB1I | GGYRCC | 1 cut(s) | 836 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1122 |
| AccII | CGCG | 2 cut(s) | 101, 296 |
| AciI | CCGC | 2 cut(s) | 86, 378 |
| AcoI | YGGCCR | 2 cut(s) | 87, 395 |
| AcuI | CTGAAG | 2 cut(s) | 573, 1175 |
| AfaI | GTAC | 3 cut(s) | 673, 838, 1160 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 185, 404, 1042, 1122 |
| AgsI | TTSAA | 8 cut(s) | 15, 507, 520, 699, 748, 940, 1055, 1087 |
| AjiI | CACGTC | 1 cut(s) | 898 |
| AjnI | CCWGG | 1 cut(s) | 883 |
| AluBI | AGCT | 7 cut(s) | 117, 152, 614, 992, 1147, 1165, 1169 |
| AluI | AGCT | 7 cut(s) | 117, 152, 614, 992, 1147, 1165, 1169 |
| Alw21I | GWGCWC | 1 cut(s) | 714 |
| Alw26I | GTCTC | 2 cut(s) | 161, 414 |
| Alw44I | GTGCAC | 1 cut(s) | 710 |
| AoxI | GGCC | 4 cut(s) | 46, 87, 395, 962 |
| ApaLI | GTGCAC | 1 cut(s) | 710 |
| ApeKI | GCWGC | 4 cut(s) | 117, 217, 306, 359 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 193, 1050 |
| Asp718I | GGTACC | 1 cut(s) | 836 |
| AspA2I | CCTAGG | 1 cut(s) | 1079 |
| AspLEI | GCGC | 1 cut(s) | 101 |
| AspS9I | GGNCC | 2 cut(s) | 46, 763 |
| AsuC2I | CCSGG | 1 cut(s) | 399 |
| AsuHPI | GGTGA | 3 cut(s) | 340, 427, 1025 |
| AsuNHI | GCTAGC | 2 cut(s) | 1165, 1169 |
| AvaII | GGWCC | 1 cut(s) | 763 |
| AvrII | CCTAGG | 1 cut(s) | 1079 |
| AxyI | CCTNAGG | 1 cut(s) | 50 |
| BaeGI | GKGCMC | 1 cut(s) | 714 |
| BanI | GGYRCC | 1 cut(s) | 836 |
| BanII | GRGCYC | 1 cut(s) | 501 |
| Bbv12I | GWGCWC | 1 cut(s) | 714 |
| BbvI | GCAGC | 4 cut(s) | 104, 229, 293, 346 |
| BccI | CCATC | 7 cut(s) | 235, 365, 384, 607, 625, 746, 1247 |
| BceAI | ACGGC | 1 cut(s) | 112 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 206, 240, 259, 293 |
| BciT130I | CCWGG | 1 cut(s) | 885 |
| BciVI | GTATCC | 1 cut(s) | 70 |
| BclI | TGATCA | 1 cut(s) | 417 |
| BcnI | CCSGG | 1 cut(s) | 399 |
| BcoDI | GTCTC | 2 cut(s) | 161, 414 |
| BfaI | CTAG | 5 cut(s) | 146, 585, 1080, 1166, 1170 |
| BfmI | CTRYAG | 1 cut(s) | 307 |
| BfuI | GTATCC | 1 cut(s) | 70 |
| BisI | GCNGC | 5 cut(s) | 87, 118, 218, 307, 360 |
| BlnI | CCTAGG | 1 cut(s) | 1079 |
| BlsI | GCNGC | 5 cut(s) | 88, 119, 219, 308, 361 |
| Bme1390I | CCNGG | 2 cut(s) | 399, 885 |
| Bme18I | GGWCC | 1 cut(s) | 763 |
| BmgBI | CACGTC | 1 cut(s) | 898 |
| BmgT120I | GGNCC | 2 cut(s) | 46, 763 |
| BmiI | GGNNCC | 3 cut(s) | 47, 442, 838 |
| BmrFI | CCNGG | 2 cut(s) | 399, 885 |
| BmsI | GCATC | 2 cut(s) | 305, 967 |
| BmtI | GCTAGC | 2 cut(s) | 1169, 1173 |
| BpuMI | CCSGG | 1 cut(s) | 399 |
| BsaAI | YACGTR | 1 cut(s) | 1200 |
| BsaBI | GATNNNNATC | 1 cut(s) | 519 |
| BsaI | GGTCTC | 1 cut(s) | 414 |
| BsaJI | CCNNGG | 4 cut(s) | 183, 398, 436, 1079 |
| BsaWI | WCCGGW | 2 cut(s) | 210, 412 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 141, 171, 205, 235, 377, 407, 598, 628 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 185, 404, 1042, 1122 |
| Bse1I | ACTGG | 2 cut(s) | 454, 840 |
| Bse21I | CCTNAGG | 1 cut(s) | 50 |
| Bse8I | GATNNNNATC | 1 cut(s) | 519 |
| BseBI | CCWGG | 1 cut(s) | 885 |
| BseDI | CCNNGG | 4 cut(s) | 183, 398, 436, 1079 |
| BseGI | GGATG | 1 cut(s) | 674 |
| BseJI | GATNNNNATC | 1 cut(s) | 519 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 185, 404, 1042, 1122 |
| BseMII | CTCAG | 1 cut(s) | 64 |
| BseNI | ACTGG | 2 cut(s) | 454, 840 |
| BseRI | GAGGAG | 1 cut(s) | 917 |
| BseSI | GKGCMC | 1 cut(s) | 714 |
| BseXI | GCAGC | 4 cut(s) | 104, 229, 293, 346 |
| BseYI | CCCAGC | 1 cut(s) | 403 |
| Bsh1236I | CGCG | 2 cut(s) | 101, 296 |
| BshFI | GGCC | 4 cut(s) | 48, 89, 397, 964 |
| BshNI | GGYRCC | 1 cut(s) | 836 |
| BsiHKAI | GWGCWC | 1 cut(s) | 714 |
| BsiSI | CCGG | 3 cut(s) | 211, 398, 413 |
| BslFI | GGGAC | 2 cut(s) | 560, 787 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 185, 404, 1042, 1122 |
| BsmAI | GTCTC | 2 cut(s) | 161, 414 |
| BsmBI | CGTCTC | 1 cut(s) | 161 |
| BsmFI | GGGAC | 2 cut(s) | 560, 787 |
| BsnI | GGCC | 4 cut(s) | 48, 89, 397, 964 |
| Bso31I | GGTCTC | 1 cut(s) | 414 |
| Bsp1286I | GDGCHC | 2 cut(s) | 501, 714 |
| Bsp143I | GATC | 1 cut(s) | 417 |
| Bsp19I | CCATGG | 2 cut(s) | 183, 436 |
| BspACI | CCGC | 2 cut(s) | 86, 378 |
| BspANI | GGCC | 4 cut(s) | 48, 89, 397, 964 |
| BspCNI | CTCAG | 1 cut(s) | 63 |
| BspFNI | CGCG | 2 cut(s) | 101, 296 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspLI | GGNNCC | 3 cut(s) | 47, 442, 838 |
| BspMAI | CTGCAG | 1 cut(s) | 311 |
| BspOI | GCTAGC | 2 cut(s) | 1169, 1173 |
| BspT107I | GGYRCC | 1 cut(s) | 836 |
| BspTNI | GGTCTC | 1 cut(s) | 414 |
| BsrI | ACTGG | 2 cut(s) | 454, 840 |
| BssECI | CCNNGG | 4 cut(s) | 183, 398, 436, 1079 |
| BssMI | GATC | 1 cut(s) | 417 |
| BssT1I | CCWWGG | 3 cut(s) | 183, 436, 1079 |
| Bst2UI | CCWGG | 1 cut(s) | 885 |
| Bst4CI | ACNGT | 1 cut(s) | 1178 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 315, 798 |
| BstBAI | YACGTR | 1 cut(s) | 1200 |
| BstC8I | GCNNGC | 6 cut(s) | 84, 91, 311, 982, 1167, 1171 |
| BstDEI | CTNAG | 2 cut(s) | 50, 986 |
| BstDSI | CCRYGG | 2 cut(s) | 183, 436 |
| BstF5I | GGATG | 1 cut(s) | 674 |
| BstFNI | CGCG | 2 cut(s) | 101, 296 |
| BstHHI | GCGC | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 420 |
| BstMAI | GTCTC | 2 cut(s) | 161, 414 |
| BstMBI | GATC | 1 cut(s) | 417 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 107, 315, 798 |
| BstNI | CCWGG | 1 cut(s) | 885 |
| BstNSI | RCATGY | 1 cut(s) | 322 |
| BstSCI | CCNGG | 2 cut(s) | 397, 883 |
| BstSFI | CTRYAG | 1 cut(s) | 307 |
| BstSLI | GKGCMC | 1 cut(s) | 714 |
| BstUI | CGCG | 2 cut(s) | 101, 296 |
| BstV1I | GCAGC | 4 cut(s) | 104, 229, 293, 346 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 190 |
| Bsu36I | CCTNAGG | 1 cut(s) | 50 |
| BsuI | GTATCC | 1 cut(s) | 70 |
| BsuRI | GGCC | 4 cut(s) | 48, 89, 397, 964 |
| BtgI | CCRYGG | 2 cut(s) | 183, 436 |
| BtgZI | GCGATG | 2 cut(s) | 254, 328 |
| BtrI | CACGTC | 1 cut(s) | 898 |
| BtsCI | GGATG | 1 cut(s) | 674 |
| BtsI | GCAGTG | 1 cut(s) | 277 |
| BtsIMutI | CAGTG | 5 cut(s) | 277, 447, 549, 1174, 1191 |
| Cac8I | GCNNGC | 6 cut(s) | 84, 91, 311, 982, 1167, 1171 |
| CciI | TCATGA | 1 cut(s) | 523 |
| CfoI | GCGC | 1 cut(s) | 101 |
| Cfr13I | GGNCC | 2 cut(s) | 46, 763 |
| CseI | GACGC | 3 cut(s) | 178, 209, 351 |
| Csp6I | GTAC | 3 cut(s) | 672, 837, 1159 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 270, 305, 793, 828 |
| CviAII | CATG | 6 cut(s) | 184, 319, 425, 437, 524, 1228 |
| CviQI | GTAC | 3 cut(s) | 672, 837, 1159 |
| DdeI | CTNAG | 2 cut(s) | 50, 986 |
| DpnI | GATC | 1 cut(s) | 419 |
| DpnII | GATC | 1 cut(s) | 417 |
| DraI | TTTAAA | 1 cut(s) | 849 |
| EaeI | YGGCCR | 2 cut(s) | 87, 395 |
| Eco130I | CCWWGG | 3 cut(s) | 183, 436, 1079 |
| Eco24I | GRGCYC | 1 cut(s) | 501 |
| Eco31I | GGTCTC | 1 cut(s) | 414 |
| Eco47I | GGWCC | 1 cut(s) | 763 |
| Eco57I | CTGAAG | 2 cut(s) | 573, 1175 |
| Eco81I | CCTNAGG | 1 cut(s) | 50 |
| EcoO109I | RGGNCCY | 1 cut(s) | 46 |
| EcoRII | CCWGG | 1 cut(s) | 883 |
| EcoT14I | CCWWGG | 3 cut(s) | 183, 436, 1079 |
| EcoT22I | ATGCAT | 1 cut(s) | 320 |
| EcoT38I | GRGCYC | 1 cut(s) | 501 |
| ErhI | CCWWGG | 3 cut(s) | 183, 436, 1079 |
| Esp3I | CGTCTC | 1 cut(s) | 161 |
| FaeI | CATG | 6 cut(s) | 187, 322, 428, 440, 527, 1231 |
| FaqI | GGGAC | 2 cut(s) | 560, 787 |
| FatI | CATG | 6 cut(s) | 183, 318, 424, 436, 523, 1227 |
| FbaI | TGATCA | 1 cut(s) | 417 |
| Fnu4HI | GCNGC | 5 cut(s) | 87, 118, 218, 307, 360 |
| FokI | GGATG | 1 cut(s) | 661 |
| FriOI | GRGCYC | 1 cut(s) | 501 |
| Fsp4HI | GCNGC | 5 cut(s) | 87, 118, 218, 307, 360 |
| FspBI | CTAG | 5 cut(s) | 146, 585, 1080, 1166, 1170 |
| GlaI | GCGC | 1 cut(s) | 100 |
| GluI | GCNGC | 5 cut(s) | 87, 118, 218, 307, 360 |
| GsaI | CCCAGC | 1 cut(s) | 407 |
| HaeIII | GGCC | 4 cut(s) | 48, 89, 397, 964 |
| HapII | CCGG | 3 cut(s) | 211, 398, 413 |
| HgaI | GACGC | 3 cut(s) | 178, 209, 351 |
| HhaI | GCGC | 1 cut(s) | 101 |
| Hin1II | CATG | 6 cut(s) | 187, 322, 428, 440, 527, 1231 |
| Hin6I | GCGC | 1 cut(s) | 99 |
| HinP1I | GCGC | 1 cut(s) | 99 |
| HinfI | GANTC | 6 cut(s) | 130, 175, 429, 479, 520, 542 |
| HpaII | CCGG | 3 cut(s) | 211, 398, 413 |
| HphI | GGTGA | 3 cut(s) | 340, 427, 1025 |
| Hpy166II | GTNNAC | 2 cut(s) | 712, 1203 |
| Hpy188I | TCNGA | 4 cut(s) | 129, 135, 496, 541 |
| Hpy188III | TCNNGA | 3 cut(s) | 164, 524, 974 |
| Hpy8I | GTNNAC | 2 cut(s) | 712, 1203 |
| Hpy99I | CGWCG | 5 cut(s) | 98, 225, 228, 258, 367 |
| HpyAV | CCTTC | 5 cut(s) | 259, 319, 754, 957, 1040 |
| HpyCH4III | ACNGT | 1 cut(s) | 1178 |
| HpyCH4IV | ACGT | 3 cut(s) | 156, 897, 1199 |
| HpyCH4V | TGCA | 6 cut(s) | 309, 318, 581, 712, 792, 1213 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 107, 315, 798 |
| HpyF3I | CTNAG | 2 cut(s) | 50, 986 |
| HpySE526I | ACGT | 3 cut(s) | 156, 897, 1199 |
| Hsp92II | CATG | 6 cut(s) | 187, 322, 428, 440, 527, 1231 |
| HspAI | GCGC | 1 cut(s) | 99 |
| KpnI | GGTACC | 1 cut(s) | 840 |
| Ksp22I | TGATCA | 1 cut(s) | 417 |
| Kzo9I | GATC | 1 cut(s) | 417 |
| LmnI | GCTCC | 3 cut(s) | 149, 619, 806 |
| Lsp1109I | GCAGC | 4 cut(s) | 104, 229, 293, 346 |
| LweI | GCATC | 2 cut(s) | 305, 967 |
| MaeI | CTAG | 5 cut(s) | 146, 585, 1080, 1166, 1170 |
| MaeII | ACGT | 3 cut(s) | 156, 897, 1199 |
| MaeIII | GTNAC | 3 cut(s) | 633, 1031, 1111 |
| MalI | GATC | 1 cut(s) | 419 |
| MboI | GATC | 1 cut(s) | 417 |
| MboII | GAAGA | 3 cut(s) | 594, 733, 1086 |
| MhlI | GDGCHC | 2 cut(s) | 501, 714 |
| MluCI | AATT | 5 cut(s) | 9, 502, 535, 1183, 1222 |
| MlyI | GAGTC | 1 cut(s) | 139 |
| MmeI | TCCRAC | 5 cut(s) | 107, 113, 203, 226, 570 |
| Mph1103I | ATGCAT | 1 cut(s) | 320 |
| MroXI | GAANNNNTTC | 2 cut(s) | 193, 1050 |
| MseI | TTAA | 4 cut(s) | 848, 953, 1182, 1187 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| MspI | CCGG | 3 cut(s) | 211, 398, 413 |
| MspR9I | CCNGG | 2 cut(s) | 399, 885 |
| MvaI | CCWGG | 1 cut(s) | 885 |
| MvnI | CGCG | 2 cut(s) | 101, 296 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 107, 315, 798 |
| NciI | CCSGG | 1 cut(s) | 399 |
| NcoI | CCATGG | 2 cut(s) | 183, 436 |
| NdeII | GATC | 1 cut(s) | 417 |
| NheI | GCTAGC | 2 cut(s) | 1165, 1169 |
| NlaIII | CATG | 6 cut(s) | 187, 322, 428, 440, 527, 1231 |
| NlaIV | GGNNCC | 3 cut(s) | 47, 442, 838 |
| NmeAIII | GCCGAG | 1 cut(s) | 586 |
| NmuCI | GTSAC | 2 cut(s) | 633, 1031 |
| NsiI | ATGCAT | 1 cut(s) | 320 |
| NspI | RCATGY | 1 cut(s) | 322 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PdmI | GAANNNNTTC | 2 cut(s) | 193, 1050 |
| PfeI | GAWTC | 5 cut(s) | 175, 429, 479, 520, 542 |
| PflFI | GACNNNGTC | 1 cut(s) | 631 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1122 |
| PkrI | GCNGC | 5 cut(s) | 88, 119, 219, 308, 361 |
| PleI | GAGTC | 1 cut(s) | 138 |
| PpsI | GAGTC | 1 cut(s) | 138 |
| Ppu21I | YACGTR | 1 cut(s) | 1200 |
| Psp6I | CCWGG | 1 cut(s) | 883 |
| PspFI | CCCAGC | 1 cut(s) | 403 |
| PspGI | CCWGG | 1 cut(s) | 883 |
| PspN4I | GGNNCC | 3 cut(s) | 47, 442, 838 |
| PspPI | GGNCC | 2 cut(s) | 46, 763 |
| PstI | CTGCAG | 1 cut(s) | 311 |
| PsyI | GACNNNGTC | 1 cut(s) | 631 |
| RsaI | GTAC | 3 cut(s) | 673, 838, 1160 |
| RsaNI | GTAC | 3 cut(s) | 672, 837, 1159 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SaqAI | TTAA | 4 cut(s) | 848, 953, 1182, 1187 |
| SatI | GCNGC | 5 cut(s) | 87, 118, 218, 307, 360 |
| Sau3AI | GATC | 1 cut(s) | 417 |
| Sau96I | GGNCC | 2 cut(s) | 46, 763 |
| SchI | GAGTC | 1 cut(s) | 139 |
| ScrFI | CCNGG | 2 cut(s) | 399, 885 |
| SduI | GDGCHC | 2 cut(s) | 501, 714 |
| SfaNI | GCATC | 2 cut(s) | 305, 967 |
| SfcI | CTRYAG | 1 cut(s) | 307 |
| SinI | GGWCC | 1 cut(s) | 763 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| Sse9I | AATT | 5 cut(s) | 9, 502, 535, 1183, 1222 |
| SsiI | CCGC | 2 cut(s) | 86, 378 |
| SspMI | CTAG | 5 cut(s) | 146, 585, 1080, 1166, 1170 |
| StyD4I | CCNGG | 2 cut(s) | 397, 883 |
| StyI | CCWWGG | 3 cut(s) | 183, 436, 1079 |
| TaaI | ACNGT | 1 cut(s) | 1178 |
| TaiI | ACGT | 3 cut(s) | 159, 900, 1202 |
| TaqI | TCGA | 5 cut(s) | 140, 201, 253, 323, 365 |
| TasI | AATT | 5 cut(s) | 9, 502, 535, 1183, 1222 |
| TatI | WGTACW | 1 cut(s) | 671 |
| TauI | GCSGC | 1 cut(s) | 89 |
| TfiI | GAWTC | 5 cut(s) | 175, 429, 479, 520, 542 |
| Tru1I | TTAA | 4 cut(s) | 848, 953, 1182, 1187 |
| Tru9I | TTAA | 4 cut(s) | 848, 953, 1182, 1187 |
| TscAI | CASTG | 5 cut(s) | 277, 454, 556, 1181, 1198 |
| TseFI | GTSAC | 2 cut(s) | 633, 1031 |
| TseI | GCWGC | 4 cut(s) | 117, 217, 306, 359 |
| Tsp45I | GTSAC | 2 cut(s) | 633, 1031 |
| TspDTI | ATGAA | 3 cut(s) | 540, 957, 1237 |
| TspGWI | ACGGA | 1 cut(s) | 271 |
| TspRI | CASTG | 5 cut(s) | 277, 454, 556, 1181, 1198 |
| Tth111I | GACNNNGTC | 1 cut(s) | 631 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1122 |
| VneI | GTGCAC | 1 cut(s) | 710 |
| VpaK11BI | GGWCC | 1 cut(s) | 763 |
| XceI | RCATGY | 1 cut(s) | 322 |
| XmaJI | CCTAGG | 1 cut(s) | 1079 |
| XmnI | GAANNNNTTC | 2 cut(s) | 193, 1050 |
| XspI | CTAG | 5 cut(s) | 146, 585, 1080, 1166, 1170 |
| Zsp2I | ATGCAT | 1 cut(s) | 320 |