Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 137 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1210 |
| AclWI | GGATC | 2 cut(s) | 1332, 1345 |
| AcsI | RAATTY | 2 cut(s) | 1042, 1282 |
| AcuI | CTGAAG | 1 cut(s) | 941 |
| AfaI | GTAC | 3 cut(s) | 100, 1322, 1331 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 338, 480, 891, 1210 |
| AhlI | ACTAGT | 1 cut(s) | 67 |
| AjnI | CCWGG | 2 cut(s) | 474, 661 |
| AluBI | AGCT | 5 cut(s) | 218, 452, 919, 931, 1252 |
| AluI | AGCT | 5 cut(s) | 218, 452, 919, 931, 1252 |
| Alw26I | GTCTC | 2 cut(s) | 372, 1268 |
| AlwI | GGATC | 2 cut(s) | 1332, 1345 |
| ApeKI | GCWGC | 6 cut(s) | 168, 392, 452, 484, 758, 1249 |
| ApoI | RAATTY | 2 cut(s) | 1042, 1282 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1267, 1299 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 884, 1142 |
| AspLEI | GCGC | 1 cut(s) | 138 |
| AspS9I | GGNCC | 2 cut(s) | 471, 1085 |
| AsuC2I | CCSGG | 2 cut(s) | 78, 813 |
| AsuHPI | GGTGA | 5 cut(s) | 262, 484, 844, 1177, 1182 |
| AsuII | TTCGAA | 1 cut(s) | 398 |
| AvaII | GGWCC | 2 cut(s) | 471, 1085 |
| BamHI | GGATCC | 1 cut(s) | 1337 |
| BbsI | GAAGAC | 2 cut(s) | 224, 416 |
| BbvCI | CCTCAGC | 1 cut(s) | 972 |
| BbvI | GCAGC | 6 cut(s) | 155, 379, 439, 496, 745, 1261 |
| BccI | CCATC | 7 cut(s) | 204, 518, 521, 701, 863, 961, 1212 |
| BciT130I | CCWGG | 2 cut(s) | 476, 663 |
| BcnI | CCSGG | 2 cut(s) | 78, 813 |
| BcoDI | GTCTC | 2 cut(s) | 372, 1268 |
| BcuI | ACTAGT | 1 cut(s) | 67 |
| BfaI | CTAG | 4 cut(s) | 68, 618, 654, 1366 |
| BfmI | CTRYAG | 1 cut(s) | 862 |
| BisI | GCNGC | 6 cut(s) | 169, 393, 453, 485, 759, 1250 |
| BlsI | GCNGC | 6 cut(s) | 170, 394, 454, 486, 760, 1251 |
| BmcAI | AGTACT | 1 cut(s) | 1331 |
| Bme1390I | CCNGG | 4 cut(s) | 78, 476, 663, 813 |
| Bme18I | GGWCC | 2 cut(s) | 471, 1085 |
| BmgT120I | GGNCC | 2 cut(s) | 471, 1085 |
| BmiI | GGNNCC | 3 cut(s) | 75, 473, 1339 |
| BmrFI | CCNGG | 4 cut(s) | 78, 476, 663, 813 |
| BmsI | GCATC | 1 cut(s) | 892 |
| BpiI | GAAGAC | 2 cut(s) | 224, 416 |
| Bpu10I | CCTNAGC | 1 cut(s) | 972 |
| Bpu14I | TTCGAA | 1 cut(s) | 398 |
| BpuMI | CCSGG | 2 cut(s) | 78, 813 |
| BsaJI | CCNNGG | 4 cut(s) | 474, 495, 661, 662 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 338, 480, 891, 1210 |
| Bse1I | ACTGG | 1 cut(s) | 1357 |
| Bse3DI | GCAATG | 2 cut(s) | 54, 753 |
| BseBI | CCWGG | 2 cut(s) | 476, 663 |
| BseDI | CCNNGG | 4 cut(s) | 474, 495, 661, 662 |
| BseGI | GGATG | 4 cut(s) | 855, 900, 972, 999 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 338, 480, 891, 1210 |
| BseMI | GCAATG | 2 cut(s) | 54, 753 |
| BseMII | CTCAG | 3 cut(s) | 137, 756, 963 |
| BseNI | ACTGG | 1 cut(s) | 1357 |
| BseRI | GAGGAG | 3 cut(s) | 989, 992, 1327 |
| BseXI | GCAGC | 6 cut(s) | 155, 379, 439, 496, 745, 1261 |
| Bsh1285I | CGRYCG | 1 cut(s) | 275 |
| BsiEI | CGRYCG | 1 cut(s) | 275 |
| BsiSI | CCGG | 2 cut(s) | 78, 812 |
| BslFI | GGGAC | 4 cut(s) | 314, 457, 827, 1121 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 338, 480, 891, 1210 |
| BsmAI | GTCTC | 2 cut(s) | 372, 1268 |
| BsmFI | GGGAC | 4 cut(s) | 314, 457, 827, 1121 |
| BsmI | GAATGC | 1 cut(s) | 382 |
| Bsp119I | TTCGAA | 1 cut(s) | 398 |
| Bsp1407I | TGTACA | 1 cut(s) | 98 |
| Bsp143I | GATC | 2 cut(s) | 502, 1337 |
| BspCNI | CTCAG | 3 cut(s) | 136, 757, 964 |
| BspLI | GGNNCC | 3 cut(s) | 75, 473, 1339 |
| BspPI | GGATC | 2 cut(s) | 1332, 1345 |
| BspT104I | TTCGAA | 1 cut(s) | 398 |
| BsrDI | GCAATG | 2 cut(s) | 54, 753 |
| BsrGI | TGTACA | 1 cut(s) | 98 |
| BsrI | ACTGG | 1 cut(s) | 1357 |
| BssECI | CCNNGG | 4 cut(s) | 474, 495, 661, 662 |
| BssMI | GATC | 2 cut(s) | 502, 1337 |
| BssT1I | CCWWGG | 1 cut(s) | 495 |
| Bst2UI | CCWGG | 2 cut(s) | 476, 663 |
| Bst4CI | ACNGT | 1 cut(s) | 541 |
| Bst6I | CTCTTC | 4 cut(s) | 425, 431, 1026, 1032 |
| BstAUI | TGTACA | 1 cut(s) | 98 |
| BstBI | TTCGAA | 1 cut(s) | 398 |
| BstDEI | CTNAG | 5 cut(s) | 123, 626, 765, 889, 972 |
| BstF5I | GGATG | 4 cut(s) | 855, 900, 972, 999 |
| BstHHI | GCGC | 1 cut(s) | 138 |
| BstKTI | GATC | 2 cut(s) | 505, 1340 |
| BstMAI | GTCTC | 2 cut(s) | 372, 1268 |
| BstMBI | GATC | 2 cut(s) | 502, 1337 |
| BstMCI | CGRYCG | 1 cut(s) | 275 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 911 |
| BstNI | CCWGG | 2 cut(s) | 476, 663 |
| BstNSI | RCATGY | 1 cut(s) | 175 |
| BstSCI | CCNGG | 4 cut(s) | 76, 474, 661, 811 |
| BstSFI | CTRYAG | 1 cut(s) | 862 |
| BstV1I | GCAGC | 6 cut(s) | 155, 379, 439, 496, 745, 1261 |
| BstV2I | GAAGAC | 2 cut(s) | 224, 416 |
| BstX2I | RGATCY | 1 cut(s) | 1337 |
| BstYI | RGATCY | 1 cut(s) | 1337 |
| BtsCI | GGATG | 4 cut(s) | 855, 900, 972, 999 |
| CfoI | GCGC | 1 cut(s) | 138 |
| Cfr13I | GGNCC | 2 cut(s) | 471, 1085 |
| CseI | GACGC | 1 cut(s) | 174 |
| Csp6I | GTAC | 3 cut(s) | 99, 1321, 1330 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 369, 404 |
| CviAII | CATG | 5 cut(s) | 102, 172, 301, 1210, 1297 |
| CviQI | GTAC | 3 cut(s) | 99, 1321, 1330 |
| DdeI | CTNAG | 5 cut(s) | 123, 626, 765, 889, 972 |
| DpnI | GATC | 2 cut(s) | 504, 1339 |
| DpnII | GATC | 2 cut(s) | 502, 1337 |
| DraI | TTTAAA | 2 cut(s) | 729, 820 |
| Eam1104I | CTCTTC | 4 cut(s) | 425, 431, 1026, 1032 |
| EarI | CTCTTC | 4 cut(s) | 425, 431, 1026, 1032 |
| Eco130I | CCWWGG | 1 cut(s) | 495 |
| Eco47I | GGWCC | 2 cut(s) | 471, 1085 |
| Eco57I | CTGAAG | 1 cut(s) | 941 |
| EcoO109I | RGGNCCY | 1 cut(s) | 471 |
| EcoRII | CCWGG | 2 cut(s) | 474, 661 |
| EcoT14I | CCWWGG | 1 cut(s) | 495 |
| ErhI | CCWWGG | 1 cut(s) | 495 |
| FaeI | CATG | 5 cut(s) | 105, 175, 304, 1213, 1300 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1130, 1162, 1316, 1348 |
| FaqI | GGGAC | 4 cut(s) | 314, 457, 827, 1121 |
| FatI | CATG | 5 cut(s) | 101, 171, 300, 1209, 1296 |
| Fnu4HI | GCNGC | 6 cut(s) | 169, 393, 453, 485, 759, 1250 |
| FokI | GGATG | 4 cut(s) | 842, 907, 979, 1006 |
| Fsp4HI | GCNGC | 6 cut(s) | 169, 393, 453, 485, 759, 1250 |
| FspBI | CTAG | 4 cut(s) | 68, 618, 654, 1366 |
| FspI | TGCGCA | 1 cut(s) | 137 |
| GlaI | GCGC | 1 cut(s) | 137 |
| GluI | GCNGC | 6 cut(s) | 169, 393, 453, 485, 759, 1250 |
| HapII | CCGG | 2 cut(s) | 78, 812 |
| HgaI | GACGC | 1 cut(s) | 174 |
| HhaI | GCGC | 1 cut(s) | 138 |
| Hin1II | CATG | 5 cut(s) | 105, 175, 304, 1213, 1300 |
| Hin6I | GCGC | 1 cut(s) | 136 |
| HinP1I | GCGC | 1 cut(s) | 136 |
| HinfI | GANTC | 6 cut(s) | 305, 356, 365, 691, 736, 1223 |
| HpaII | CCGG | 2 cut(s) | 78, 812 |
| HphI | GGTGA | 5 cut(s) | 262, 484, 844, 1177, 1182 |
| Hpy166II | GTNNAC | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 3 cut(s) | 126, 690, 715 |
| Hpy188III | TCNNGA | 3 cut(s) | 517, 740, 1216 |
| Hpy8I | GTNNAC | 1 cut(s) | 86 |
| HpyAV | CCTTC | 4 cut(s) | 895, 904, 919, 1210 |
| HpyCH4III | ACNGT | 1 cut(s) | 541 |
| HpyCH4V | TGCA | 9 cut(s) | 155, 171, 380, 651, 839, 905, 1172, 1249, 1353 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 911 |
| HpyF3I | CTNAG | 5 cut(s) | 123, 626, 765, 889, 972 |
| Hsp92II | CATG | 5 cut(s) | 105, 175, 304, 1213, 1300 |
| HspAI | GCGC | 1 cut(s) | 136 |
| Kzo9I | GATC | 2 cut(s) | 502, 1337 |
| LmnI | GCTCC | 2 cut(s) | 928, 1314 |
| Lsp1109I | GCAGC | 6 cut(s) | 155, 379, 439, 496, 745, 1261 |
| LweI | GCATC | 1 cut(s) | 892 |
| MaeI | CTAG | 4 cut(s) | 68, 618, 654, 1366 |
| MaeIII | GTNAC | 4 cut(s) | 457, 998, 1153, 1213 |
| MalI | GATC | 2 cut(s) | 504, 1339 |
| MboI | GATC | 2 cut(s) | 502, 1337 |
| MflI | RGATCY | 1 cut(s) | 1337 |
| MluCI | AATT | 6 cut(s) | 324, 745, 777, 1042, 1230, 1282 |
| MlyI | GAGTC | 3 cut(s) | 374, 685, 745 |
| MroXI | GAANNNNTTC | 2 cut(s) | 884, 1142 |
| MseI | TTAA | 4 cut(s) | 677, 728, 819, 948 |
| MspI | CCGG | 2 cut(s) | 78, 812 |
| MspR9I | CCNGG | 4 cut(s) | 78, 476, 663, 813 |
| Mva1269I | GAATGC | 1 cut(s) | 382 |
| MvaI | CCWGG | 2 cut(s) | 476, 663 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 911 |
| NciI | CCSGG | 2 cut(s) | 78, 813 |
| NdeII | GATC | 2 cut(s) | 502, 1337 |
| NlaIII | CATG | 5 cut(s) | 105, 175, 304, 1213, 1300 |
| NlaIV | GGNNCC | 3 cut(s) | 75, 473, 1339 |
| NmuCI | GTSAC | 2 cut(s) | 457, 1213 |
| NsbI | TGCGCA | 1 cut(s) | 137 |
| NspI | RCATGY | 1 cut(s) | 175 |
| NspV | TTCGAA | 1 cut(s) | 398 |
| PasI | CCCWGGG | 1 cut(s) | 662 |
| PctI | GAATGC | 1 cut(s) | 382 |
| PdmI | GAANNNNTTC | 2 cut(s) | 884, 1142 |
| PfeI | GAWTC | 3 cut(s) | 305, 356, 1223 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1210 |
| PkrI | GCNGC | 6 cut(s) | 170, 394, 454, 486, 760, 1251 |
| PleI | GAGTC | 3 cut(s) | 373, 685, 744 |
| PpsI | GAGTC | 3 cut(s) | 373, 685, 744 |
| PpuMI | RGGWCCY | 1 cut(s) | 471 |
| Psp5II | RGGWCCY | 1 cut(s) | 471 |
| Psp6I | CCWGG | 2 cut(s) | 474, 661 |
| PspGI | CCWGG | 2 cut(s) | 474, 661 |
| PspN4I | GGNNCC | 3 cut(s) | 75, 473, 1339 |
| PspPI | GGNCC | 2 cut(s) | 471, 1085 |
| PspPPI | RGGWCCY | 1 cut(s) | 471 |
| PsuI | RGATCY | 1 cut(s) | 1337 |
| RsaI | GTAC | 3 cut(s) | 100, 1322, 1331 |
| RsaNI | GTAC | 3 cut(s) | 99, 1321, 1330 |
| SaqAI | TTAA | 4 cut(s) | 677, 728, 819, 948 |
| SatI | GCNGC | 6 cut(s) | 169, 393, 453, 485, 759, 1250 |
| Sau3AI | GATC | 2 cut(s) | 502, 1337 |
| Sau96I | GGNCC | 2 cut(s) | 471, 1085 |
| ScaI | AGTACT | 1 cut(s) | 1331 |
| SchI | GAGTC | 3 cut(s) | 374, 685, 745 |
| ScrFI | CCNGG | 4 cut(s) | 78, 476, 663, 813 |
| SfaNI | GCATC | 1 cut(s) | 892 |
| SfcI | CTRYAG | 1 cut(s) | 862 |
| SfuI | TTCGAA | 1 cut(s) | 398 |
| SinI | GGWCC | 2 cut(s) | 471, 1085 |
| SpeI | ACTAGT | 1 cut(s) | 67 |
| Sse9I | AATT | 6 cut(s) | 324, 745, 777, 1042, 1230, 1282 |
| SspMI | CTAG | 4 cut(s) | 68, 618, 654, 1366 |
| StyD4I | CCNGG | 4 cut(s) | 76, 474, 661, 811 |
| StyI | CCWWGG | 1 cut(s) | 495 |
| TaaI | ACNGT | 1 cut(s) | 541 |
| TaqI | TCGA | 4 cut(s) | 398, 404, 705, 1005 |
| TaqII | GACCGA | 2 cut(s) | 47, 289 |
| TasI | AATT | 6 cut(s) | 324, 745, 777, 1042, 1230, 1282 |
| TatI | WGTACW | 3 cut(s) | 98, 1320, 1329 |
| TfiI | GAWTC | 3 cut(s) | 305, 356, 1223 |
| Tru1I | TTAA | 4 cut(s) | 677, 728, 819, 948 |
| Tru9I | TTAA | 4 cut(s) | 677, 728, 819, 948 |
| TseFI | GTSAC | 2 cut(s) | 457, 1213 |
| TseI | GCWGC | 6 cut(s) | 168, 392, 452, 484, 758, 1249 |
| Tsp45I | GTSAC | 2 cut(s) | 457, 1213 |
| TspDTI | ATGAA | 9 cut(s) | 57, 195, 224, 443, 732, 798, 1032, 1110, 1248 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1210 |
| VpaK11BI | GGWCC | 2 cut(s) | 471, 1085 |
| XapI | RAATTY | 2 cut(s) | 1042, 1282 |
| XceI | RCATGY | 1 cut(s) | 175 |
| XmnI | GAANNNNTTC | 2 cut(s) | 884, 1142 |
| XspI | CTAG | 4 cut(s) | 68, 618, 654, 1366 |
| ZrmI | AGTACT | 1 cut(s) | 1331 |