Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 243 |
| AbsI | CCTCGAGG | 1 cut(s) | 1144 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 644, 1715 |
| AccI | GTMKAC | 1 cut(s) | 1479 |
| AciI | CCGC | 1 cut(s) | 45 |
| AclWI | GGATC | 2 cut(s) | 1133, 1364 |
| AcsI | RAATTY | 3 cut(s) | 305, 775, 806 |
| AcuI | CTGAAG | 1 cut(s) | 1604 |
| AdeI | CACNNNGTG | 1 cut(s) | 171 |
| AfaI | GTAC | 3 cut(s) | 336, 911, 1713 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 644, 1715 |
| AflII | CTTAAG | 1 cut(s) | 410 |
| AflIII | ACRYGT | 3 cut(s) | 130, 278, 442 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1459 |
| AjiI | CACGTC | 2 cut(s) | 1003, 1735 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1183, 1215 |
| AluBI | AGCT | 8 cut(s) | 383, 454, 478, 618, 989, 1341, 1618, 1815 |
| AluI | AGCT | 8 cut(s) | 383, 454, 478, 618, 989, 1341, 1618, 1815 |
| Alw21I | GWGCWC | 2 cut(s) | 832, 1048 |
| Alw26I | GTCTC | 3 cut(s) | 908, 1279, 1418 |
| Alw44I | GTGCAC | 2 cut(s) | 828, 1044 |
| AlwI | GGATC | 2 cut(s) | 1133, 1364 |
| Ama87I | CYCGRG | 1 cut(s) | 1144 |
| AoxI | GGCC | 1 cut(s) | 1401 |
| ApaLI | GTGCAC | 2 cut(s) | 828, 1044 |
| ApoI | RAATTY | 3 cut(s) | 305, 775, 806 |
| AseI | ATTAAT | 2 cut(s) | 26, 669 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 306, 1445, 1833 |
| AspA2I | CCTAGG | 1 cut(s) | 1153 |
| AspS9I | GGNCC | 3 cut(s) | 1345, 1401, 1801 |
| AsuHPI | GGTGA | 5 cut(s) | 149, 255, 1488, 1535, 1559 |
| AsuII | TTCGAA | 1 cut(s) | 1208 |
| AvaI | CYCGRG | 1 cut(s) | 1144 |
| AvaII | GGWCC | 2 cut(s) | 1345, 1801 |
| AvrII | CCTAGG | 1 cut(s) | 1153 |
| BaeGI | GKGCMC | 2 cut(s) | 832, 1048 |
| BauI | CACGAG | 1 cut(s) | 1728 |
| BbsI | GAAGAC | 2 cut(s) | 101, 264 |
| Bbv12I | GWGCWC | 2 cut(s) | 832, 1048 |
| BccI | CCATC | 5 cut(s) | 234, 545, 851, 1008, 1378 |
| BceAI | ACGGC | 2 cut(s) | 1044, 1343 |
| BciVI | GTATCC | 1 cut(s) | 1209 |
| BclI | TGATCA | 4 cut(s) | 142, 874, 958, 1068 |
| BcoDI | GTCTC | 3 cut(s) | 908, 1279, 1418 |
| BfaI | CTAG | 5 cut(s) | 35, 1011, 1037, 1154, 1913 |
| BfmI | CTRYAG | 1 cut(s) | 1417 |
| BfrI | CTTAAG | 1 cut(s) | 410 |
| BfuI | GTATCC | 1 cut(s) | 1209 |
| BlnI | CCTAGG | 1 cut(s) | 1153 |
| BmcAI | AGTACT | 1 cut(s) | 1713 |
| Bme18I | GGWCC | 2 cut(s) | 1345, 1801 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1459 |
| BmeT110I | CYCGRG | 1 cut(s) | 1144 |
| BmgBI | CACGTC | 2 cut(s) | 1003, 1735 |
| BmgT120I | GGNCC | 3 cut(s) | 1345, 1401, 1801 |
| BmiI | GGNNCC | 3 cut(s) | 42, 1151, 1192 |
| BmsI | GCATC | 5 cut(s) | 740, 1264, 1543, 1564, 1772 |
| BpiI | GAAGAC | 2 cut(s) | 101, 264 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 774, 806, 1127, 1159, 1519, 1551 |
| Bpu14I | TTCGAA | 1 cut(s) | 1208 |
| BpuEI | CTTGAG | 1 cut(s) | 890 |
| Bsa29I | ATCGAT | 1 cut(s) | 1869 |
| BsaAI | YACGTR | 1 cut(s) | 1483 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1875 |
| BsaJI | CCNNGG | 3 cut(s) | 1153, 1224, 1348 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 499, 529 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 644, 1715 |
| Bse1I | ACTGG | 1 cut(s) | 1709 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1875 |
| BseCI | ATCGAT | 1 cut(s) | 1869 |
| BseDI | CCNNGG | 3 cut(s) | 1153, 1224, 1348 |
| BseGI | GGATG | 2 cut(s) | 10, 1763 |
| BseJI | GATNNNNATC | 1 cut(s) | 1875 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 644, 1715 |
| BseMII | CTCAG | 2 cut(s) | 281, 782 |
| BseNI | ACTGG | 1 cut(s) | 1709 |
| BseSI | GKGCMC | 2 cut(s) | 832, 1048 |
| BsgI | GTGCAG | 1 cut(s) | 1443 |
| BshFI | GGCC | 1 cut(s) | 1403 |
| BshVI | ATCGAT | 1 cut(s) | 1869 |
| BsiHKAI | GWGCWC | 2 cut(s) | 832, 1048 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1144 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 644, 1715 |
| BsmAI | GTCTC | 3 cut(s) | 908, 1279, 1418 |
| BsmI | GAATGC | 2 cut(s) | 1277, 1775 |
| BsnI | GGCC | 1 cut(s) | 1403 |
| BsoBI | CYCGRG | 1 cut(s) | 1144 |
| Bsp119I | TTCGAA | 1 cut(s) | 1208 |
| Bsp1286I | GDGCHC | 2 cut(s) | 832, 1048 |
| Bsp143I | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| BspACI | CCGC | 1 cut(s) | 45 |
| BspANI | GGCC | 1 cut(s) | 1403 |
| BspCNI | CTCAG | 2 cut(s) | 280, 781 |
| BspDI | ATCGAT | 1 cut(s) | 1869 |
| BspHI | TCATGA | 2 cut(s) | 229, 1281 |
| BspLI | GGNNCC | 3 cut(s) | 42, 1151, 1192 |
| BspPI | GGATC | 2 cut(s) | 1133, 1364 |
| BspT104I | TTCGAA | 1 cut(s) | 1208 |
| BspTI | CTTAAG | 1 cut(s) | 410 |
| BsrI | ACTGG | 1 cut(s) | 1709 |
| BssECI | CCNNGG | 3 cut(s) | 1153, 1224, 1348 |
| BssMI | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| BssSI | CACGAG | 1 cut(s) | 1728 |
| BssT1I | CCWWGG | 3 cut(s) | 1153, 1224, 1348 |
| Bst2BI | CACGAG | 1 cut(s) | 1728 |
| Bst4CI | ACNGT | 6 cut(s) | 126, 433, 708, 1421, 1759, 1834 |
| Bst6I | CTCTTC | 2 cut(s) | 1055, 1475 |
| BstAFI | CTTAAG | 1 cut(s) | 410 |
| BstBAI | YACGTR | 1 cut(s) | 1483 |
| BstBI | TTCGAA | 1 cut(s) | 1208 |
| BstC8I | GCNNGC | 1 cut(s) | 156 |
| BstDEI | CTNAG | 3 cut(s) | 267, 768, 1898 |
| BstEII | GGTNACC | 1 cut(s) | 1494 |
| BstF5I | GGATG | 2 cut(s) | 10, 1763 |
| BstKTI | GATC | 8 cut(s) | 145, 877, 961, 1071, 1128, 1372, 1873, 1879 |
| BstMAI | GTCTC | 3 cut(s) | 908, 1279, 1418 |
| BstMBI | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 222 |
| BstNSI | RCATGY | 2 cut(s) | 134, 446 |
| BstPI | GGTNACC | 1 cut(s) | 1494 |
| BstSFI | CTRYAG | 1 cut(s) | 1417 |
| BstSLI | GKGCMC | 2 cut(s) | 832, 1048 |
| BstV2I | GAAGAC | 2 cut(s) | 101, 264 |
| BstX2I | RGATCY | 1 cut(s) | 1369 |
| BstYI | RGATCY | 1 cut(s) | 1369 |
| Bsu15I | ATCGAT | 1 cut(s) | 1869 |
| BsuI | GTATCC | 1 cut(s) | 1209 |
| BsuRI | GGCC | 1 cut(s) | 1403 |
| BsuTUI | ATCGAT | 1 cut(s) | 1869 |
| BtrI | CACGTC | 2 cut(s) | 1003, 1735 |
| BtsCI | GGATG | 2 cut(s) | 10, 1763 |
| BtsI | GCAGTG | 1 cut(s) | 186 |
| BtsIMutI | CAGTG | 4 cut(s) | 186, 888, 1426, 1881 |
| Cac8I | GCNNGC | 1 cut(s) | 156 |
| CciI | TCATGA | 2 cut(s) | 229, 1281 |
| Cfr13I | GGNCC | 3 cut(s) | 1345, 1401, 1801 |
| ClaI | ATCGAT | 1 cut(s) | 1869 |
| Csp6I | GTAC | 3 cut(s) | 335, 910, 1712 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1492, 1527 |
| CviAII | CATG | 8 cut(s) | 131, 230, 299, 341, 443, 815, 1282, 1303 |
| CviQI | GTAC | 3 cut(s) | 335, 910, 1712 |
| DdeI | CTNAG | 3 cut(s) | 267, 768, 1898 |
| DpnI | GATC | 8 cut(s) | 144, 876, 960, 1070, 1127, 1371, 1872, 1878 |
| DpnII | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| DraI | TTTAAA | 1 cut(s) | 121 |
| DraIII | CACNNNGTG | 1 cut(s) | 171 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1459 |
| Eam1104I | CTCTTC | 2 cut(s) | 1055, 1475 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1459 |
| EarI | CTCTTC | 2 cut(s) | 1055, 1475 |
| Eco130I | CCWWGG | 3 cut(s) | 1153, 1224, 1348 |
| Eco47I | GGWCC | 2 cut(s) | 1345, 1801 |
| Eco57I | CTGAAG | 1 cut(s) | 1604 |
| Eco88I | CYCGRG | 1 cut(s) | 1144 |
| Eco91I | GGTNACC | 1 cut(s) | 1494 |
| EcoO65I | GGTNACC | 1 cut(s) | 1494 |
| EcoT14I | CCWWGG | 3 cut(s) | 1153, 1224, 1348 |
| EcoT22I | ATGCAT | 2 cut(s) | 733, 1279 |
| ErhI | CCWWGG | 3 cut(s) | 1153, 1224, 1348 |
| FaeI | CATG | 8 cut(s) | 134, 233, 302, 344, 446, 818, 1285, 1306 |
| FatI | CATG | 8 cut(s) | 130, 229, 298, 340, 442, 814, 1281, 1302 |
| FauI | CCCGC | 1 cut(s) | 52 |
| FbaI | TGATCA | 4 cut(s) | 142, 874, 958, 1068 |
| FblI | GTMKAC | 1 cut(s) | 1479 |
| FokI | GGATG | 2 cut(s) | 17, 1750 |
| FspBI | CTAG | 5 cut(s) | 35, 1011, 1037, 1154, 1913 |
| HaeIII | GGCC | 1 cut(s) | 1403 |
| Hin1II | CATG | 8 cut(s) | 134, 233, 302, 344, 446, 818, 1285, 1306 |
| HindIII | AAGCTT | 1 cut(s) | 476 |
| HinfI | GANTC | 5 cut(s) | 743, 892, 1237, 1427, 1769 |
| HphI | GGTGA | 5 cut(s) | 149, 255, 1488, 1535, 1559 |
| Hpy166II | GTNNAC | 3 cut(s) | 830, 1046, 1480 |
| Hpy188I | TCNGA | 5 cut(s) | 147, 526, 1333, 1623, 1768 |
| Hpy8I | GTNNAC | 3 cut(s) | 830, 1046, 1480 |
| HpyAV | CCTTC | 3 cut(s) | 1119, 1435, 1538 |
| HpyCH4III | ACNGT | 6 cut(s) | 126, 433, 708, 1421, 1759, 1834 |
| HpyCH4IV | ACGT | 5 cut(s) | 280, 1002, 1482, 1734, 1908 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 222 |
| HpyF3I | CTNAG | 3 cut(s) | 267, 768, 1898 |
| HpySE526I | ACGT | 5 cut(s) | 280, 1002, 1482, 1734, 1908 |
| Hsp92II | CATG | 8 cut(s) | 134, 233, 302, 344, 446, 818, 1285, 1306 |
| Ksp22I | TGATCA | 4 cut(s) | 142, 874, 958, 1068 |
| Kzo9I | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| LmnI | GCTCC | 2 cut(s) | 176, 1891 |
| LpnPI | CCDG | 7 cut(s) | 189, 195, 1173, 1550, 1722, 1773, 1839 |
| LweI | GCATC | 5 cut(s) | 740, 1264, 1543, 1564, 1772 |
| MaeI | CTAG | 5 cut(s) | 35, 1011, 1037, 1154, 1913 |
| MaeII | ACGT | 5 cut(s) | 280, 1002, 1482, 1734, 1908 |
| MaeIII | GTNAC | 9 cut(s) | 126, 261, 438, 445, 1085, 1171, 1494, 1718, 1730 |
| MalI | GATC | 8 cut(s) | 144, 876, 960, 1070, 1127, 1371, 1872, 1878 |
| MboI | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| MboII | GAAGA | 9 cut(s) | 106, 264, 276, 619, 712, 1042, 1462, 1562, 1649 |
| MflI | RGATCY | 1 cut(s) | 1369 |
| MhlI | GDGCHC | 2 cut(s) | 832, 1048 |
| MlyI | GAGTC | 1 cut(s) | 1778 |
| MmeI | TCCRAC | 2 cut(s) | 946, 1226 |
| Mph1103I | ATGCAT | 2 cut(s) | 733, 1279 |
| MroXI | GAANNNNTTC | 3 cut(s) | 306, 1445, 1833 |
| MslI | CAYNNNNRTG | 2 cut(s) | 135, 1846 |
| MspA1I | CMGCKG | 1 cut(s) | 47 |
| MspCI | CTTAAG | 1 cut(s) | 410 |
| Mva1269I | GAATGC | 2 cut(s) | 1277, 1775 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 222 |
| NdeII | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| NlaIII | CATG | 8 cut(s) | 134, 233, 302, 344, 446, 818, 1285, 1306 |
| NlaIV | GGNNCC | 3 cut(s) | 42, 1151, 1192 |
| NmuCI | GTSAC | 7 cut(s) | 261, 438, 1085, 1171, 1494, 1718, 1730 |
| NsiI | ATGCAT | 2 cut(s) | 733, 1279 |
| NspI | RCATGY | 2 cut(s) | 134, 446 |
| NspV | TTCGAA | 1 cut(s) | 1208 |
| PaeR7I | CTCGAG | 1 cut(s) | 1144 |
| PagI | TCATGA | 2 cut(s) | 229, 1281 |
| PciI | ACATGT | 2 cut(s) | 130, 442 |
| PctI | GAATGC | 2 cut(s) | 1277, 1775 |
| PdmI | GAANNNNTTC | 3 cut(s) | 306, 1445, 1833 |
| PfeI | GAWTC | 4 cut(s) | 743, 892, 1237, 1427 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 644, 1715 |
| PleI | GAGTC | 1 cut(s) | 1777 |
| PpsI | GAGTC | 1 cut(s) | 1777 |
| Ppu21I | YACGTR | 1 cut(s) | 1483 |
| PscI | ACATGT | 2 cut(s) | 130, 442 |
| PshBI | ATTAAT | 2 cut(s) | 26, 669 |
| PsiI | TTATAA | 1 cut(s) | 243 |
| PspEI | GGTNACC | 1 cut(s) | 1494 |
| PspN4I | GGNNCC | 3 cut(s) | 42, 1151, 1192 |
| PspPI | GGNCC | 3 cut(s) | 1345, 1401, 1801 |
| PspXI | VCTCGAGB | 1 cut(s) | 1144 |
| PsuI | RGATCY | 1 cut(s) | 1369 |
| RsaI | GTAC | 3 cut(s) | 336, 911, 1713 |
| RsaNI | GTAC | 3 cut(s) | 335, 910, 1712 |
| RseI | CAYNNNNRTG | 2 cut(s) | 135, 1846 |
| Sau3AI | GATC | 8 cut(s) | 142, 874, 958, 1068, 1125, 1369, 1870, 1876 |
| Sau96I | GGNCC | 3 cut(s) | 1345, 1401, 1801 |
| ScaI | AGTACT | 1 cut(s) | 1713 |
| SchI | GAGTC | 1 cut(s) | 1778 |
| SduI | GDGCHC | 2 cut(s) | 832, 1048 |
| SfaNI | GCATC | 5 cut(s) | 740, 1264, 1543, 1564, 1772 |
| SfcI | CTRYAG | 1 cut(s) | 1417 |
| Sfr274I | CTCGAG | 1 cut(s) | 1144 |
| SfuI | TTCGAA | 1 cut(s) | 1208 |
| SinI | GGWCC | 2 cut(s) | 1345, 1801 |
| SlaI | CTCGAG | 1 cut(s) | 1144 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 135, 1846 |
| SmlI | CTYRAG | 3 cut(s) | 410, 905, 1144 |
| SmoI | CTYRAG | 3 cut(s) | 410, 905, 1144 |
| SsiI | CCGC | 1 cut(s) | 45 |
| SspI | AATATT | 2 cut(s) | 24, 1325 |
| SspMI | CTAG | 5 cut(s) | 35, 1011, 1037, 1154, 1913 |
| StyI | CCWWGG | 3 cut(s) | 1153, 1224, 1348 |
| TaaI | ACNGT | 6 cut(s) | 126, 433, 708, 1421, 1759, 1834 |
| TaiI | ACGT | 5 cut(s) | 283, 1005, 1485, 1737, 1911 |
| TaqI | TCGA | 7 cut(s) | 713, 820, 1145, 1208, 1375, 1810, 1869 |
| TatI | WGTACW | 2 cut(s) | 909, 1711 |
| TfiI | GAWTC | 4 cut(s) | 743, 892, 1237, 1427 |
| TscAI | CASTG | 4 cut(s) | 186, 888, 1426, 1888 |
| TseFI | GTSAC | 7 cut(s) | 261, 438, 1085, 1171, 1494, 1718, 1730 |
| Tsp45I | GTSAC | 7 cut(s) | 261, 438, 1085, 1171, 1494, 1718, 1730 |
| TspDTI | ATGAA | 8 cut(s) | 315, 380, 470, 803, 1134, 1270, 1319, 1650 |
| TspRI | CASTG | 4 cut(s) | 186, 888, 1426, 1888 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 644, 1715 |
| Vha464I | CTTAAG | 1 cut(s) | 410 |
| VneI | GTGCAC | 2 cut(s) | 828, 1044 |
| VpaK11BI | GGWCC | 2 cut(s) | 1345, 1801 |
| VspI | ATTAAT | 2 cut(s) | 26, 669 |
| XapI | RAATTY | 3 cut(s) | 305, 775, 806 |
| XceI | RCATGY | 2 cut(s) | 134, 446 |
| XhoI | CTCGAG | 1 cut(s) | 1144 |
| XmaJI | CCTAGG | 1 cut(s) | 1153 |
| XmiI | GTMKAC | 1 cut(s) | 1479 |
| XmnI | GAANNNNTTC | 3 cut(s) | 306, 1445, 1833 |
| XspI | CTAG | 5 cut(s) | 35, 1011, 1037, 1154, 1913 |
| ZrmI | AGTACT | 1 cut(s) | 1713 |
| Zsp2I | ATGCAT | 2 cut(s) | 733, 1279 |