Zinc finger BED domain-containing protein RICESLEEPER
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 60 - 142 | 3.1e-31 | hAT family C-terminal dimerisation region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 475 |
| AcsI | RAATTY | 1 cut(s) | 58 |
| AcuI | CTGAAG | 1 cut(s) | 483 |
| AgsI | TTSAA | 1 cut(s) | 238 |
| AluBI | AGCT | 3 cut(s) | 218, 311, 323 |
| AluI | AGCT | 3 cut(s) | 218, 311, 323 |
| Alw26I | GTCTC | 1 cut(s) | 457 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 392 |
| ApeKI | GCWGC | 1 cut(s) | 332 |
| ApoI | RAATTY | 1 cut(s) | 58 |
| AseI | ATTAAT | 1 cut(s) | 252 |
| AsuHPI | GGTGA | 1 cut(s) | 418 |
| BanI | GGYRCC | 1 cut(s) | 475 |
| BauI | CACGAG | 2 cut(s) | 288, 369 |
| BbsI | GAAGAC | 1 cut(s) | 141 |
| BbvI | GCAGC | 1 cut(s) | 344 |
| BccI | CCATC | 1 cut(s) | 43 |
| BcoDI | GTCTC | 1 cut(s) | 457 |
| BfaI | CTAG | 1 cut(s) | 102 |
| BfmI | CTRYAG | 2 cut(s) | 315, 393 |
| BglII | AGATCT | 1 cut(s) | 446 |
| BisI | GCNGC | 1 cut(s) | 333 |
| BlsI | GCNGC | 1 cut(s) | 334 |
| BmiI | GGNNCC | 2 cut(s) | 201, 477 |
| BmsI | GCATC | 1 cut(s) | 118 |
| BpiI | GAAGAC | 1 cut(s) | 141 |
| BpmI | CTGGAG | 1 cut(s) | 215 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 191, 221, 339, 369 |
| Bse1I | ACTGG | 1 cut(s) | 245 |
| BseMII | CTCAG | 3 cut(s) | 9, 36, 318 |
| BseNI | ACTGG | 1 cut(s) | 245 |
| BseRI | GAGGAG | 1 cut(s) | 212 |
| BseXI | GCAGC | 1 cut(s) | 344 |
| BshNI | GGYRCC | 1 cut(s) | 475 |
| BsmAI | GTCTC | 1 cut(s) | 457 |
| Bsp143I | GATC | 2 cut(s) | 7, 446 |
| BspCNI | CTCAG | 3 cut(s) | 10, 37, 319 |
| BspLI | GGNNCC | 2 cut(s) | 201, 477 |
| BspT107I | GGYRCC | 1 cut(s) | 475 |
| BsrI | ACTGG | 1 cut(s) | 245 |
| BssMI | GATC | 2 cut(s) | 7, 446 |
| BssSI | CACGAG | 2 cut(s) | 288, 369 |
| Bst2BI | CACGAG | 2 cut(s) | 288, 369 |
| Bst4CI | ACNGT | 3 cut(s) | 94, 319, 394 |
| Bst6I | CTCTTC | 2 cut(s) | 346, 465 |
| BstDEI | CTNAG | 4 cut(s) | 18, 45, 165, 327 |
| BstKTI | GATC | 2 cut(s) | 10, 449 |
| BstMAI | GTCTC | 1 cut(s) | 457 |
| BstMBI | GATC | 2 cut(s) | 7, 446 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 284, 308, 329 |
| BstSFI | CTRYAG | 2 cut(s) | 315, 393 |
| BstV1I | GCAGC | 1 cut(s) | 344 |
| BstV2I | GAAGAC | 1 cut(s) | 141 |
| BstX2I | RGATCY | 1 cut(s) | 446 |
| BstYI | RGATCY | 1 cut(s) | 446 |
| BtsIMutI | CAGTG | 3 cut(s) | 15, 76, 99 |
| CaiI | CAGNNNCTG | 1 cut(s) | 392 |
| CviJI | RGCY | 8 cut(s) | 98, 202, 218, 287, 311, 323, 401, 424 |
| CviKI_1 | RGCY | 8 cut(s) | 98, 202, 218, 287, 311, 323, 401, 424 |
| DdeI | CTNAG | 4 cut(s) | 18, 45, 165, 327 |
| DpnI | GATC | 2 cut(s) | 9, 448 |
| DpnII | GATC | 2 cut(s) | 7, 446 |
| Eam1104I | CTCTTC | 2 cut(s) | 346, 465 |
| EarI | CTCTTC | 2 cut(s) | 346, 465 |
| Eco57I | CTGAAG | 1 cut(s) | 483 |
| EcoT22I | ATGCAT | 1 cut(s) | 133 |
| FaiI | YATR | 4 cut(s) | 24, 156, 296, 380 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 408, 440 |
| Fnu4HI | GCNGC | 1 cut(s) | 333 |
| Fsp4HI | GCNGC | 1 cut(s) | 333 |
| FspBI | CTAG | 1 cut(s) | 102 |
| GluI | GCNGC | 1 cut(s) | 333 |
| GsuI | CTGGAG | 1 cut(s) | 215 |
| HinfI | GANTC | 3 cut(s) | 32, 53, 365 |
| HphI | GGTGA | 1 cut(s) | 418 |
| Hpy188I | TCNGA | 4 cut(s) | 46, 178, 328, 463 |
| Hpy188III | TCNNGA | 5 cut(s) | 102, 194, 290, 386, 432 |
| HpyAV | CCTTC | 1 cut(s) | 137 |
| HpyCH4III | ACNGT | 3 cut(s) | 94, 319, 394 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 131, 260 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 284, 308, 329 |
| HpyF3I | CTNAG | 4 cut(s) | 18, 45, 165, 327 |
| Kzo9I | GATC | 2 cut(s) | 7, 446 |
| LmnI | GCTCC | 2 cut(s) | 184, 199 |
| LpnPI | CCDG | 4 cut(s) | 179, 226, 321, 399 |
| Lsp1109I | GCAGC | 1 cut(s) | 344 |
| LweI | GCATC | 1 cut(s) | 118 |
| MaeI | CTAG | 1 cut(s) | 102 |
| MaeIII | GTNAC | 2 cut(s) | 290, 406 |
| MalI | GATC | 2 cut(s) | 9, 448 |
| MboI | GATC | 2 cut(s) | 7, 446 |
| MboII | GAAGA | 6 cut(s) | 38, 141, 363, 476, 479, 482 |
| MflI | RGATCY | 1 cut(s) | 446 |
| MluCI | AATT | 4 cut(s) | 58, 65, 113, 249 |
| MmeI | TCCRAC | 2 cut(s) | 162, 325 |
| MnlI | CCTC | 7 cut(s) | 132, 190, 322, 341, 391, 439, 466 |
| Mph1103I | ATGCAT | 1 cut(s) | 133 |
| MseI | TTAA | 2 cut(s) | 228, 252 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 284, 308, 329 |
| NdeII | GATC | 2 cut(s) | 7, 446 |
| NlaIV | GGNNCC | 2 cut(s) | 201, 477 |
| NmuCI | GTSAC | 2 cut(s) | 290, 406 |
| NsiI | ATGCAT | 1 cut(s) | 133 |
| PfeI | GAWTC | 3 cut(s) | 32, 53, 365 |
| PkrI | GCNGC | 1 cut(s) | 334 |
| PshBI | ATTAAT | 1 cut(s) | 252 |
| PspN4I | GGNNCC | 2 cut(s) | 201, 477 |
| PstNI | CAGNNNCTG | 1 cut(s) | 392 |
| PsuI | RGATCY | 1 cut(s) | 446 |
| SaqAI | TTAA | 2 cut(s) | 228, 252 |
| SatI | GCNGC | 1 cut(s) | 333 |
| Sau3AI | GATC | 2 cut(s) | 7, 446 |
| SetI | ASST | 4 cut(s) | 220, 313, 325, 477 |
| SfaNI | GCATC | 1 cut(s) | 118 |
| SfcI | CTRYAG | 2 cut(s) | 315, 393 |
| Sse9I | AATT | 4 cut(s) | 58, 65, 113, 249 |
| SspMI | CTAG | 1 cut(s) | 102 |
| TaaI | ACNGT | 3 cut(s) | 94, 319, 394 |
| TaqI | TCGA | 1 cut(s) | 433 |
| TasI | AATT | 4 cut(s) | 58, 65, 113, 249 |
| TfiI | GAWTC | 3 cut(s) | 32, 53, 365 |
| Tru1I | TTAA | 2 cut(s) | 228, 252 |
| Tru9I | TTAA | 2 cut(s) | 228, 252 |
| TscAI | CASTG | 3 cut(s) | 22, 76, 99 |
| TseFI | GTSAC | 2 cut(s) | 290, 406 |
| TseI | GCWGC | 1 cut(s) | 332 |
| Tsp45I | GTSAC | 2 cut(s) | 290, 406 |
| TspDTI | ATGAA | 4 cut(s) | 24, 39, 126, 378 |
| TspGWI | ACGGA | 1 cut(s) | 454 |
| TspRI | CASTG | 3 cut(s) | 22, 76, 99 |
| VspI | ATTAAT | 1 cut(s) | 252 |
| XapI | RAATTY | 1 cut(s) | 58 |
| XbaI | TCTAGA | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 102 |
| Zsp2I | ATGCAT | 1 cut(s) | 133 |