Zinc finger BED domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1569 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1475 |
| AccII | CGCG | 1 cut(s) | 291 |
| AciI | CCGC | 7 cut(s) | 14, 90, 100, 244, 289, 789, 810 |
| AclWI | GGATC | 4 cut(s) | 664, 990, 1008, 1553 |
| AcoI | YGGCCR | 2 cut(s) | 241, 1045 |
| AcuI | CTGAAG | 1 cut(s) | 102 |
| AdeI | CACNNNGTG | 2 cut(s) | 1148, 1268 |
| AfaI | GTAC | 2 cut(s) | 1169, 1466 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 688 |
| AjnI | CCWGG | 2 cut(s) | 153, 186 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 889, 921 |
| AluBI | AGCT | 8 cut(s) | 196, 333, 474, 774, 905, 1176, 1292, 1306 |
| AluI | AGCT | 8 cut(s) | 196, 333, 474, 774, 905, 1176, 1292, 1306 |
| Alw21I | GWGCWC | 1 cut(s) | 198 |
| Alw26I | GTCTC | 2 cut(s) | 116, 332 |
| AlwI | GGATC | 4 cut(s) | 664, 990, 1008, 1553 |
| Ama87I | CYCGRG | 1 cut(s) | 915 |
| AoxI | GGCC | 8 cut(s) | 159, 207, 234, 241, 1045, 1259, 1433, 1488 |
| ApeKI | GCWGC | 3 cut(s) | 434, 863, 1289 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 222, 254 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1316 |
| AspS9I | GGNCC | 5 cut(s) | 160, 208, 302, 1259, 1433 |
| AsuHPI | GGTGA | 1 cut(s) | 247 |
| AsuNHI | GCTAGC | 1 cut(s) | 770 |
| AvaI | CYCGRG | 1 cut(s) | 915 |
| AvaII | GGWCC | 1 cut(s) | 302 |
| BalI | TGGCCA | 1 cut(s) | 1047 |
| BanII | GRGCYC | 3 cut(s) | 198, 923, 1063 |
| BbsI | GAAGAC | 2 cut(s) | 699, 1309 |
| Bbv12I | GWGCWC | 1 cut(s) | 198 |
| BbvI | GCAGC | 3 cut(s) | 421, 875, 1301 |
| BccI | CCATC | 5 cut(s) | 266, 290, 316, 793, 1019 |
| BceAI | ACGGC | 1 cut(s) | 221 |
| BciT130I | CCWGG | 2 cut(s) | 155, 188 |
| BclI | TGATCA | 1 cut(s) | 25 |
| BcoDI | GTCTC | 2 cut(s) | 116, 332 |
| BfaI | CTAG | 4 cut(s) | 771, 1094, 1541, 1563 |
| BglII | AGATCT | 3 cut(s) | 743, 1402, 1411 |
| BisI | GCNGC | 6 cut(s) | 14, 244, 435, 810, 864, 1290 |
| BlpI | GCTNAGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 6 cut(s) | 15, 245, 436, 811, 865, 1291 |
| Bme1390I | CCNGG | 2 cut(s) | 155, 188 |
| Bme18I | GGWCC | 1 cut(s) | 302 |
| BmeT110I | CYCGRG | 1 cut(s) | 915 |
| BmgT120I | GGNCC | 5 cut(s) | 160, 208, 302, 1259, 1433 |
| BmiI | GGNNCC | 1 cut(s) | 88 |
| BmrFI | CCNGG | 2 cut(s) | 155, 188 |
| BmsI | GCATC | 4 cut(s) | 268, 773, 1096, 1261 |
| BmtI | GCTAGC | 1 cut(s) | 774 |
| BpiI | GAAGAC | 2 cut(s) | 699, 1309 |
| Bpu10I | CCTNAGC | 1 cut(s) | 498 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 192 |
| Bsa29I | ATCGAT | 1 cut(s) | 1023 |
| BsaBI | GATNNNNATC | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 2 cut(s) | 459, 731 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 131, 161 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 688 |
| Bse1I | ACTGG | 3 cut(s) | 37, 586, 888 |
| Bse3DI | GCAATG | 1 cut(s) | 622 |
| Bse8I | GATNNNNATC | 1 cut(s) | 24 |
| BseBI | CCWGG | 2 cut(s) | 155, 188 |
| BseCI | ATCGAT | 1 cut(s) | 1023 |
| BseDI | CCNNGG | 2 cut(s) | 459, 731 |
| BseGI | GGATG | 4 cut(s) | 508, 785, 979, 1003 |
| BseJI | GATNNNNATC | 1 cut(s) | 24 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 688 |
| BseMI | GCAATG | 1 cut(s) | 622 |
| BseMII | CTCAG | 4 cut(s) | 127, 183, 651, 1429 |
| BseNI | ACTGG | 3 cut(s) | 37, 586, 888 |
| BseRI | GAGGAG | 5 cut(s) | 766, 957, 1133, 1141, 1169 |
| BseX3I | CGGCCG | 1 cut(s) | 241 |
| BseXI | GCAGC | 3 cut(s) | 421, 875, 1301 |
| BseYI | CCCAGC | 1 cut(s) | 59 |
| BsgI | GTGCAG | 1 cut(s) | 1347 |
| Bsh1236I | CGCG | 1 cut(s) | 291 |
| Bsh1285I | CGRYCG | 1 cut(s) | 244 |
| BshFI | GGCC | 8 cut(s) | 161, 209, 236, 243, 1047, 1261, 1435, 1490 |
| BshVI | ATCGAT | 1 cut(s) | 1023 |
| BsiEI | CGRYCG | 1 cut(s) | 244 |
| BsiHKAI | GWGCWC | 1 cut(s) | 198 |
| BsiHKCI | CYCGRG | 1 cut(s) | 915 |
| BslFI | GGGAC | 2 cut(s) | 592, 1295 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 688 |
| BsmAI | GTCTC | 2 cut(s) | 116, 332 |
| BsmFI | GGGAC | 2 cut(s) | 592, 1295 |
| BsmI | GAATGC | 2 cut(s) | 514, 1373 |
| BsnI | GGCC | 8 cut(s) | 161, 209, 236, 243, 1047, 1261, 1435, 1490 |
| BsoBI | CYCGRG | 1 cut(s) | 915 |
| Bsp1286I | GDGCHC | 3 cut(s) | 198, 923, 1063 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 192 |
| BspACI | CCGC | 7 cut(s) | 14, 90, 100, 244, 289, 789, 810 |
| BspANI | GGCC | 8 cut(s) | 161, 209, 236, 243, 1047, 1261, 1435, 1490 |
| BspCNI | CTCAG | 4 cut(s) | 126, 184, 652, 1428 |
| BspDI | ATCGAT | 1 cut(s) | 1023 |
| BspFNI | CGCG | 1 cut(s) | 291 |
| BspLI | GGNNCC | 1 cut(s) | 88 |
| BspOI | GCTAGC | 1 cut(s) | 774 |
| BspPI | GGATC | 4 cut(s) | 664, 990, 1008, 1553 |
| BsrDI | GCAATG | 1 cut(s) | 622 |
| BsrI | ACTGG | 3 cut(s) | 37, 586, 888 |
| BssECI | CCNNGG | 2 cut(s) | 459, 731 |
| BssT1I | CCWWGG | 2 cut(s) | 459, 731 |
| Bst2UI | CCWGG | 2 cut(s) | 155, 188 |
| Bst4CI | ACNGT | 4 cut(s) | 74, 302, 364, 877 |
| Bst6I | CTCTTC | 3 cut(s) | 225, 934, 1541 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 713 |
| BstC8I | GCNNGC | 4 cut(s) | 11, 472, 772, 962 |
| BstDEI | CTNAG | 6 cut(s) | 113, 192, 498, 660, 1053, 1415 |
| BstF5I | GGATG | 4 cut(s) | 508, 785, 979, 1003 |
| BstFNI | CGCG | 1 cut(s) | 291 |
| BstMAI | GTCTC | 2 cut(s) | 116, 332 |
| BstMCI | CGRYCG | 1 cut(s) | 244 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 713, 1370 |
| BstNI | CCWGG | 2 cut(s) | 155, 188 |
| BstNSI | RCATGY | 2 cut(s) | 863, 1102 |
| BstSCI | CCNGG | 2 cut(s) | 153, 186 |
| BstUI | CGCG | 1 cut(s) | 291 |
| BstV1I | GCAGC | 3 cut(s) | 421, 875, 1301 |
| BstV2I | GAAGAC | 2 cut(s) | 699, 1309 |
| BstX2I | RGATCY | 5 cut(s) | 656, 743, 1402, 1411, 1558 |
| BstYI | RGATCY | 5 cut(s) | 656, 743, 1402, 1411, 1558 |
| BstZI | CGGCCG | 1 cut(s) | 241 |
| Bsu15I | ATCGAT | 1 cut(s) | 1023 |
| BsuRI | GGCC | 8 cut(s) | 161, 209, 236, 243, 1047, 1261, 1435, 1490 |
| BsuTUI | ATCGAT | 1 cut(s) | 1023 |
| BtsCI | GGATG | 4 cut(s) | 508, 785, 979, 1003 |
| BtsI | GCAGTG | 1 cut(s) | 1359 |
| BtsIMutI | CAGTG | 3 cut(s) | 30, 873, 1359 |
| Cac8I | GCNNGC | 4 cut(s) | 11, 472, 772, 962 |
| Cfr13I | GGNCC | 5 cut(s) | 160, 208, 302, 1259, 1433 |
| ClaI | ATCGAT | 1 cut(s) | 1023 |
| Csp6I | GTAC | 2 cut(s) | 1168, 1465 |
| CviQI | GTAC | 2 cut(s) | 1168, 1465 |
| DdeI | CTNAG | 6 cut(s) | 113, 192, 498, 660, 1053, 1415 |
| DraIII | CACNNNGTG | 2 cut(s) | 1148, 1268 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1475 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1475 |
| EaeI | YGGCCR | 2 cut(s) | 241, 1045 |
| EagI | CGGCCG | 1 cut(s) | 241 |
| Eam1104I | CTCTTC | 3 cut(s) | 225, 934, 1541 |
| EarI | CTCTTC | 3 cut(s) | 225, 934, 1541 |
| Ecl136II | GAGCTC | 1 cut(s) | 196 |
| EclXI | CGGCCG | 1 cut(s) | 241 |
| Eco130I | CCWWGG | 2 cut(s) | 459, 731 |
| Eco24I | GRGCYC | 3 cut(s) | 198, 923, 1063 |
| Eco47I | GGWCC | 1 cut(s) | 302 |
| Eco52I | CGGCCG | 1 cut(s) | 241 |
| Eco53kI | GAGCTC | 1 cut(s) | 196 |
| Eco57I | CTGAAG | 1 cut(s) | 102 |
| Eco88I | CYCGRG | 1 cut(s) | 915 |
| EcoICRI | GAGCTC | 1 cut(s) | 196 |
| EcoO109I | RGGNCCY | 2 cut(s) | 208, 1433 |
| EcoRII | CCWGG | 2 cut(s) | 153, 186 |
| EcoT14I | CCWWGG | 2 cut(s) | 459, 731 |
| EcoT38I | GRGCYC | 3 cut(s) | 198, 923, 1063 |
| ErhI | CCWWGG | 2 cut(s) | 459, 731 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1389, 1421 |
| FaqI | GGGAC | 2 cut(s) | 592, 1295 |
| FbaI | TGATCA | 1 cut(s) | 25 |
| Fnu4HI | GCNGC | 6 cut(s) | 14, 244, 435, 810, 864, 1290 |
| FokI | GGATG | 4 cut(s) | 515, 772, 986, 990 |
| FriOI | GRGCYC | 3 cut(s) | 198, 923, 1063 |
| Fsp4HI | GCNGC | 6 cut(s) | 14, 244, 435, 810, 864, 1290 |
| FspBI | CTAG | 4 cut(s) | 771, 1094, 1541, 1563 |
| GluI | GCNGC | 6 cut(s) | 14, 244, 435, 810, 864, 1290 |
| GsaI | CCCAGC | 1 cut(s) | 63 |
| HaeIII | GGCC | 8 cut(s) | 161, 209, 236, 243, 1047, 1261, 1435, 1490 |
| HincII | GTYRAC | 1 cut(s) | 456 |
| HindII | GTYRAC | 1 cut(s) | 456 |
| HindIII | AAGCTT | 3 cut(s) | 331, 472, 903 |
| HinfI | GANTC | 7 cut(s) | 170, 223, 600, 662, 1160, 1439, 1448 |
| HpaI | GTTAAC | 1 cut(s) | 456 |
| HphI | GGTGA | 1 cut(s) | 247 |
| Hpy166II | GTNNAC | 2 cut(s) | 456, 893 |
| Hpy188I | TCNGA | 8 cut(s) | 184, 323, 588, 596, 661, 973, 1227, 1453 |
| Hpy188III | TCNNGA | 8 cut(s) | 167, 227, 632, 640, 991, 1309, 1406, 1480 |
| Hpy8I | GTNNAC | 2 cut(s) | 456, 893 |
| Hpy99I | CGWCG | 1 cut(s) | 242 |
| HpyAV | CCTTC | 7 cut(s) | 77, 173, 199, 697, 988, 1108, 1480 |
| HpyCH4III | ACNGT | 4 cut(s) | 74, 302, 364, 877 |
| HpyCH4V | TGCA | 7 cut(s) | 512, 572, 833, 863, 1274, 1289, 1364 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 713, 1370 |
| HpyF3I | CTNAG | 6 cut(s) | 113, 192, 498, 660, 1053, 1415 |
| Ksp22I | TGATCA | 1 cut(s) | 25 |
| KspAI | GTTAAC | 1 cut(s) | 456 |
| LmnI | GCTCC | 2 cut(s) | 271, 779 |
| Lsp1109I | GCAGC | 3 cut(s) | 421, 875, 1301 |
| LweI | GCATC | 4 cut(s) | 268, 773, 1096, 1261 |
| MaeI | CTAG | 4 cut(s) | 771, 1094, 1541, 1563 |
| MaeIII | GTNAC | 4 cut(s) | 403, 1140, 1327, 1387 |
| MflI | RGATCY | 5 cut(s) | 656, 743, 1402, 1411, 1558 |
| MhlI | GDGCHC | 3 cut(s) | 198, 923, 1063 |
| MlsI | TGGCCA | 1 cut(s) | 1047 |
| MluCI | AATT | 9 cut(s) | 390, 531, 670, 697, 748, 796, 822, 1011, 1133 |
| MluNI | TGGCCA | 1 cut(s) | 1047 |
| MlyI | GAGTC | 2 cut(s) | 164, 671 |
| MmeI | TCCRAC | 5 cut(s) | 168, 207, 719, 905, 951 |
| Mox20I | TGGCCA | 1 cut(s) | 1047 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1316 |
| MscI | TGGCCA | 1 cut(s) | 1047 |
| MseI | TTAA | 8 cut(s) | 317, 417, 455, 530, 1010, 1014, 1335, 1517 |
| MslI | CAYNNNNRTG | 2 cut(s) | 21, 1149 |
| Msp20I | TGGCCA | 1 cut(s) | 1047 |
| MspA1I | CMGCKG | 1 cut(s) | 1292 |
| MspR9I | CCNGG | 2 cut(s) | 155, 188 |
| Mva1269I | GAATGC | 2 cut(s) | 514, 1373 |
| MvaI | CCWGG | 2 cut(s) | 155, 188 |
| MvnI | CGCG | 1 cut(s) | 291 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 713, 1370 |
| NheI | GCTAGC | 1 cut(s) | 770 |
| NlaIV | GGNNCC | 1 cut(s) | 88 |
| NmuCI | GTSAC | 2 cut(s) | 1140, 1327 |
| NspI | RCATGY | 2 cut(s) | 863, 1102 |
| PacI | TTAATTAA | 1 cut(s) | 1014 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 234 |
| PctI | GAATGC | 2 cut(s) | 514, 1373 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1316 |
| PfeI | GAWTC | 5 cut(s) | 223, 600, 1160, 1439, 1448 |
| PflFI | GACNNNGTC | 1 cut(s) | 1457 |
| PkrI | GCNGC | 6 cut(s) | 15, 245, 436, 811, 865, 1291 |
| PleI | GAGTC | 2 cut(s) | 164, 670 |
| PpsI | GAGTC | 2 cut(s) | 164, 670 |
| PsiI | TTATAA | 1 cut(s) | 1569 |
| Psp124BI | GAGCTC | 1 cut(s) | 198 |
| Psp6I | CCWGG | 2 cut(s) | 153, 186 |
| PspFI | CCCAGC | 1 cut(s) | 59 |
| PspGI | CCWGG | 2 cut(s) | 153, 186 |
| PspN4I | GGNNCC | 1 cut(s) | 88 |
| PspPI | GGNCC | 5 cut(s) | 160, 208, 302, 1259, 1433 |
| PsuI | RGATCY | 5 cut(s) | 656, 743, 1402, 1411, 1558 |
| PsyI | GACNNNGTC | 1 cut(s) | 1457 |
| PvuII | CAGCTG | 1 cut(s) | 1292 |
| RsaI | GTAC | 2 cut(s) | 1169, 1466 |
| RsaNI | GTAC | 2 cut(s) | 1168, 1465 |
| RseI | CAYNNNNRTG | 2 cut(s) | 21, 1149 |
| SacI | GAGCTC | 1 cut(s) | 198 |
| SaqAI | TTAA | 8 cut(s) | 317, 417, 455, 530, 1010, 1014, 1335, 1517 |
| SatI | GCNGC | 6 cut(s) | 14, 244, 435, 810, 864, 1290 |
| Sau96I | GGNCC | 5 cut(s) | 160, 208, 302, 1259, 1433 |
| SchI | GAGTC | 2 cut(s) | 164, 671 |
| ScrFI | CCNGG | 2 cut(s) | 155, 188 |
| SduI | GDGCHC | 3 cut(s) | 198, 923, 1063 |
| SfaNI | GCATC | 4 cut(s) | 268, 773, 1096, 1261 |
| SinI | GGWCC | 1 cut(s) | 302 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 21, 1149 |
| Sse9I | AATT | 9 cut(s) | 390, 531, 670, 697, 748, 796, 822, 1011, 1133 |
| SsiI | CCGC | 7 cut(s) | 14, 90, 100, 244, 289, 789, 810 |
| SspMI | CTAG | 4 cut(s) | 771, 1094, 1541, 1563 |
| SstI | GAGCTC | 1 cut(s) | 198 |
| StyD4I | CCNGG | 2 cut(s) | 153, 186 |
| StyI | CCWWGG | 2 cut(s) | 459, 731 |
| TaaI | ACNGT | 4 cut(s) | 74, 302, 364, 877 |
| TaqI | TCGA | 5 cut(s) | 134, 168, 228, 525, 1023 |
| TasI | AATT | 9 cut(s) | 390, 531, 670, 697, 748, 796, 822, 1011, 1133 |
| TauI | GCSGC | 3 cut(s) | 16, 246, 812 |
| TfiI | GAWTC | 5 cut(s) | 223, 600, 1160, 1439, 1448 |
| Tru1I | TTAA | 8 cut(s) | 317, 417, 455, 530, 1010, 1014, 1335, 1517 |
| Tru9I | TTAA | 8 cut(s) | 317, 417, 455, 530, 1010, 1014, 1335, 1517 |
| TscAI | CASTG | 3 cut(s) | 37, 880, 1366 |
| TseFI | GTSAC | 2 cut(s) | 1140, 1327 |
| TseI | GCWGC | 3 cut(s) | 434, 863, 1289 |
| Tsp45I | GTSAC | 2 cut(s) | 1140, 1327 |
| TspDTI | ATGAA | 7 cut(s) | 595, 641, 834, 1200, 1227, 1499, 1541 |
| TspGWI | ACGGA | 1 cut(s) | 139 |
| TspRI | CASTG | 3 cut(s) | 37, 880, 1366 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1457 |
| VpaK11BI | GGWCC | 1 cut(s) | 302 |
| XceI | RCATGY | 2 cut(s) | 863, 1102 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 151, 823 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1316 |
| XspI | CTAG | 4 cut(s) | 771, 1094, 1541, 1563 |