Domain of unknown function (DUF4413)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 314 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1834 |
| Acc65I | GGTACC | 1 cut(s) | 1788 |
| AccB1I | GGYRCC | 1 cut(s) | 1788 |
| AccI | GTMKAC | 1 cut(s) | 1172 |
| AccII | CGCG | 1 cut(s) | 1738 |
| AciI | CCGC | 3 cut(s) | 363, 1736, 1951 |
| AclI | AACGTT | 1 cut(s) | 627 |
| AclWI | GGATC | 7 cut(s) | 139, 323, 336, 857, 1439, 1452, 1647 |
| AcsI | RAATTY | 6 cut(s) | 531, 687, 694, 919, 1352, 1661 |
| AcvI | CACGTG | 1 cut(s) | 1814 |
| AfaI | GTAC | 6 cut(s) | 108, 635, 1400, 1501, 1621, 1790 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 861 |
| AhlI | ACTAGT | 1 cut(s) | 346 |
| AjnI | CCWGG | 1 cut(s) | 1600 |
| AluBI | AGCT | 8 cut(s) | 124, 1085, 1181, 1385, 1505, 1595, 1611, 1899 |
| AluI | AGCT | 8 cut(s) | 124, 1085, 1181, 1385, 1505, 1595, 1611, 1899 |
| Alw21I | GWGCWC | 1 cut(s) | 1779 |
| Alw26I | GTCTC | 1 cut(s) | 1667 |
| Alw44I | GTGCAC | 1 cut(s) | 1775 |
| AlwI | GGATC | 7 cut(s) | 139, 323, 336, 857, 1439, 1452, 1647 |
| AoxI | GGCC | 2 cut(s) | 863, 1534 |
| ApaLI | GTGCAC | 1 cut(s) | 1775 |
| ApeKI | GCWGC | 4 cut(s) | 905, 1433, 1605, 1608 |
| ApoI | RAATTY | 6 cut(s) | 531, 687, 694, 919, 1352, 1661 |
| AseI | ATTAAT | 5 cut(s) | 264, 570, 1050, 1067, 1325 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1032 |
| Asp718I | GGTACC | 1 cut(s) | 1788 |
| AspA2I | CCTAGG | 1 cut(s) | 1784 |
| AspLEI | GCGC | 1 cut(s) | 1740 |
| AspS9I | GGNCC | 2 cut(s) | 147, 874 |
| AsuHPI | GGTGA | 3 cut(s) | 281, 424, 970 |
| AvaII | GGWCC | 2 cut(s) | 147, 874 |
| AvrII | CCTAGG | 1 cut(s) | 1784 |
| BaeGI | GKGCMC | 1 cut(s) | 1779 |
| BamHI | GGATCC | 2 cut(s) | 328, 1444 |
| BanI | GGYRCC | 1 cut(s) | 1788 |
| BanII | GRGCYC | 1 cut(s) | 1346 |
| BbrPI | CACGTG | 1 cut(s) | 1814 |
| BbsI | GAAGAC | 1 cut(s) | 606 |
| Bbv12I | GWGCWC | 1 cut(s) | 1779 |
| BbvI | GCAGC | 4 cut(s) | 917, 1445, 1617, 1620 |
| BccI | CCATC | 6 cut(s) | 162, 490, 754, 1083, 1526, 1801 |
| BceAI | ACGGC | 2 cut(s) | 598, 663 |
| BciT130I | CCWGG | 1 cut(s) | 1602 |
| BclI | TGATCA | 3 cut(s) | 322, 373, 1582 |
| BcoDI | GTCTC | 1 cut(s) | 1667 |
| BcuI | ACTAGT | 1 cut(s) | 346 |
| BfaI | CTAG | 3 cut(s) | 347, 1718, 1785 |
| BisI | GCNGC | 4 cut(s) | 906, 1434, 1606, 1609 |
| BlnI | CCTAGG | 1 cut(s) | 1784 |
| BlpI | GCTNAGC | 1 cut(s) | 901 |
| BlsI | GCNGC | 4 cut(s) | 907, 1435, 1607, 1610 |
| BmcAI | AGTACT | 1 cut(s) | 1400 |
| Bme1390I | CCNGG | 1 cut(s) | 1602 |
| Bme18I | GGWCC | 2 cut(s) | 147, 874 |
| BmgT120I | GGNCC | 2 cut(s) | 147, 874 |
| BmiI | GGNNCC | 5 cut(s) | 148, 330, 1446, 1725, 1790 |
| BmrFI | CCNGG | 1 cut(s) | 1602 |
| BmrI | ACTGGG | 1 cut(s) | 775 |
| BmsI | GCATC | 1 cut(s) | 1543 |
| BmuI | ACTGGG | 1 cut(s) | 775 |
| BoxI | GACNNNNGTC | 1 cut(s) | 384 |
| BpiI | GAAGAC | 1 cut(s) | 606 |
| BpmI | CTGGAG | 2 cut(s) | 603, 1423 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 901 |
| BpuEI | CTTGAG | 1 cut(s) | 1523 |
| Bsa29I | ATCGAT | 1 cut(s) | 1642 |
| BsaAI | YACGTR | 2 cut(s) | 991, 1814 |
| BsaBI | GATNNNNATC | 1 cut(s) | 327 |
| BsaI | GGTCTC | 1 cut(s) | 1667 |
| BsaJI | CCNNGG | 3 cut(s) | 435, 877, 1784 |
| BsaWI | WCCGGW | 1 cut(s) | 846 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 836, 866 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 861 |
| Bse1I | ACTGG | 4 cut(s) | 674, 770, 1406, 1727 |
| Bse3DI | GCAATG | 2 cut(s) | 354, 954 |
| Bse8I | GATNNNNATC | 1 cut(s) | 327 |
| BseBI | CCWGG | 1 cut(s) | 1602 |
| BseCI | ATCGAT | 1 cut(s) | 1642 |
| BseDI | CCNNGG | 3 cut(s) | 435, 877, 1784 |
| BseGI | GGATG | 4 cut(s) | 346, 940, 1212, 1317 |
| BseJI | GATNNNNATC | 1 cut(s) | 327 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 861 |
| BseMI | GCAATG | 2 cut(s) | 354, 954 |
| BseMII | CTCAG | 5 cut(s) | 139, 149, 915, 1290, 1694 |
| BseNI | ACTGG | 4 cut(s) | 674, 770, 1406, 1727 |
| BseRI | GAGGAG | 1 cut(s) | 1075 |
| BseSI | GKGCMC | 1 cut(s) | 1779 |
| BseXI | GCAGC | 4 cut(s) | 917, 1445, 1617, 1620 |
| BseYI | CCCAGC | 1 cut(s) | 1081 |
| BsgI | GTGCAG | 2 cut(s) | 950, 1432 |
| Bsh1236I | CGCG | 1 cut(s) | 1738 |
| Bsh1285I | CGRYCG | 1 cut(s) | 191 |
| BshFI | GGCC | 2 cut(s) | 865, 1536 |
| BshNI | GGYRCC | 1 cut(s) | 1788 |
| BshVI | ATCGAT | 1 cut(s) | 1642 |
| BsiEI | CGRYCG | 1 cut(s) | 191 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1779 |
| BsiSI | CCGG | 1 cut(s) | 847 |
| BslFI | GGGAC | 3 cut(s) | 160, 782, 1840 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 861 |
| BsmAI | GTCTC | 1 cut(s) | 1667 |
| BsmFI | GGGAC | 3 cut(s) | 160, 782, 1840 |
| BsmI | GAATGC | 1 cut(s) | 1859 |
| BsnI | GGCC | 2 cut(s) | 865, 1536 |
| Bso31I | GGTCTC | 1 cut(s) | 1667 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1346, 1779 |
| Bsp1407I | TGTACA | 1 cut(s) | 106 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 901 |
| Bsp19I | CCATGG | 2 cut(s) | 435, 877 |
| BspACI | CCGC | 3 cut(s) | 363, 1736, 1951 |
| BspANI | GGCC | 2 cut(s) | 865, 1536 |
| BspCNI | CTCAG | 5 cut(s) | 138, 150, 914, 1291, 1693 |
| BspDI | ATCGAT | 1 cut(s) | 1642 |
| BspFNI | CGCG | 1 cut(s) | 1738 |
| BspHI | TCATGA | 1 cut(s) | 376 |
| BspLI | GGNNCC | 5 cut(s) | 148, 330, 1446, 1725, 1790 |
| BspPI | GGATC | 7 cut(s) | 139, 323, 336, 857, 1439, 1452, 1647 |
| BspT107I | GGYRCC | 1 cut(s) | 1788 |
| BspTNI | GGTCTC | 1 cut(s) | 1667 |
| BsrDI | GCAATG | 2 cut(s) | 354, 954 |
| BsrGI | TGTACA | 1 cut(s) | 106 |
| BsrI | ACTGG | 4 cut(s) | 674, 770, 1406, 1727 |
| BssECI | CCNNGG | 3 cut(s) | 435, 877, 1784 |
| BssNAI | GTATAC | 1 cut(s) | 1173 |
| BssT1I | CCWWGG | 3 cut(s) | 435, 877, 1784 |
| Bst1107I | GTATAC | 1 cut(s) | 1173 |
| Bst2UI | CCWGG | 1 cut(s) | 1602 |
| Bst4CI | ACNGT | 6 cut(s) | 383, 519, 779, 1222, 1496, 1843 |
| Bst6I | CTCTTC | 1 cut(s) | 218 |
| BstAUI | TGTACA | 1 cut(s) | 106 |
| BstBAI | YACGTR | 2 cut(s) | 991, 1814 |
| BstC8I | GCNNGC | 2 cut(s) | 306, 361 |
| BstDEI | CTNAG | 9 cut(s) | 24, 125, 158, 901, 1123, 1299, 1358, 1386, 1680 |
| BstDSI | CCRYGG | 2 cut(s) | 435, 877 |
| BstEII | GGTNACC | 1 cut(s) | 422 |
| BstF5I | GGATG | 4 cut(s) | 346, 940, 1212, 1317 |
| BstFNI | CGCG | 1 cut(s) | 1738 |
| BstHHI | GCGC | 1 cut(s) | 1740 |
| BstMAI | GTCTC | 1 cut(s) | 1667 |
| BstMCI | CGRYCG | 1 cut(s) | 191 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1433 |
| BstNI | CCWGG | 1 cut(s) | 1602 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 384 |
| BstPI | GGTNACC | 1 cut(s) | 422 |
| BstSCI | CCNGG | 1 cut(s) | 1600 |
| BstSLI | GKGCMC | 1 cut(s) | 1779 |
| BstUI | CGCG | 1 cut(s) | 1738 |
| BstV1I | GCAGC | 4 cut(s) | 917, 1445, 1617, 1620 |
| BstV2I | GAAGAC | 1 cut(s) | 606 |
| BstX2I | RGATCY | 3 cut(s) | 328, 849, 1444 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1089 |
| BstYI | RGATCY | 3 cut(s) | 328, 849, 1444 |
| BstZ17I | GTATAC | 1 cut(s) | 1173 |
| Bsu15I | ATCGAT | 1 cut(s) | 1642 |
| BsuRI | GGCC | 2 cut(s) | 865, 1536 |
| BsuTUI | ATCGAT | 1 cut(s) | 1642 |
| BtgI | CCRYGG | 2 cut(s) | 435, 877 |
| BtgZI | GCGATG | 1 cut(s) | 190 |
| BtsCI | GGATG | 4 cut(s) | 346, 940, 1212, 1317 |
| BtsIMutI | CAGTG | 3 cut(s) | 133, 1626, 1901 |
| Cac8I | GCNNGC | 2 cut(s) | 306, 361 |
| CciI | TCATGA | 1 cut(s) | 376 |
| CfoI | GCGC | 1 cut(s) | 1740 |
| Cfr13I | GGNCC | 2 cut(s) | 147, 874 |
| ClaI | ATCGAT | 1 cut(s) | 1642 |
| Csp6I | GTAC | 6 cut(s) | 107, 634, 1399, 1500, 1620, 1789 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1852, 1887 |
| CviAII | CATG | 8 cut(s) | 377, 419, 436, 526, 878, 1160, 1693, 1804 |
| CviQI | GTAC | 6 cut(s) | 107, 634, 1399, 1500, 1620, 1789 |
| DdeI | CTNAG | 9 cut(s) | 24, 125, 158, 901, 1123, 1299, 1358, 1386, 1680 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1834 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1834 |
| Eam1104I | CTCTTC | 1 cut(s) | 218 |
| EarI | CTCTTC | 1 cut(s) | 218 |
| Eco130I | CCWWGG | 3 cut(s) | 435, 877, 1784 |
| Eco147I | AGGCCT | 1 cut(s) | 865 |
| Eco24I | GRGCYC | 1 cut(s) | 1346 |
| Eco31I | GGTCTC | 1 cut(s) | 1667 |
| Eco32I | GATATC | 1 cut(s) | 1698 |
| Eco47I | GGWCC | 2 cut(s) | 147, 874 |
| Eco72I | CACGTG | 1 cut(s) | 1814 |
| Eco91I | GGTNACC | 1 cut(s) | 422 |
| EcoO65I | GGTNACC | 1 cut(s) | 422 |
| EcoRII | CCWGG | 1 cut(s) | 1600 |
| EcoRV | GATATC | 1 cut(s) | 1698 |
| EcoT14I | CCWWGG | 3 cut(s) | 435, 877, 1784 |
| EcoT22I | ATGCAT | 1 cut(s) | 1558 |
| EcoT38I | GRGCYC | 1 cut(s) | 1346 |
| ErhI | CCWWGG | 3 cut(s) | 435, 877, 1784 |
| FaeI | CATG | 8 cut(s) | 380, 422, 439, 529, 881, 1163, 1696, 1807 |
| FaqI | GGGAC | 3 cut(s) | 160, 782, 1840 |
| FatI | CATG | 8 cut(s) | 376, 418, 435, 525, 877, 1159, 1692, 1803 |
| FauI | CCCGC | 1 cut(s) | 1944 |
| FauNDI | CATATG | 2 cut(s) | 1107, 1970 |
| FbaI | TGATCA | 3 cut(s) | 322, 373, 1582 |
| FblI | GTMKAC | 1 cut(s) | 1172 |
| Fnu4HI | GCNGC | 4 cut(s) | 906, 1434, 1606, 1609 |
| FokI | GGATG | 4 cut(s) | 353, 947, 1219, 1304 |
| FriOI | GRGCYC | 1 cut(s) | 1346 |
| Fsp4HI | GCNGC | 4 cut(s) | 906, 1434, 1606, 1609 |
| FspBI | CTAG | 3 cut(s) | 347, 1718, 1785 |
| GlaI | GCGC | 1 cut(s) | 1739 |
| GluI | GCNGC | 4 cut(s) | 906, 1434, 1606, 1609 |
| GsaI | CCCAGC | 1 cut(s) | 1085 |
| GsuI | CTGGAG | 2 cut(s) | 603, 1423 |
| HaeIII | GGCC | 2 cut(s) | 865, 1536 |
| HapII | CCGG | 1 cut(s) | 847 |
| HhaI | GCGC | 1 cut(s) | 1740 |
| Hin1II | CATG | 8 cut(s) | 380, 422, 439, 529, 881, 1163, 1696, 1807 |
| Hin6I | GCGC | 1 cut(s) | 1738 |
| HinP1I | GCGC | 1 cut(s) | 1738 |
| HincII | GTYRAC | 2 cut(s) | 42, 1839 |
| HindII | GTYRAC | 2 cut(s) | 42, 1839 |
| HinfI | GANTC | 9 cut(s) | 17, 58, 453, 710, 837, 1452, 1828, 1853, 1906 |
| HpaII | CCGG | 1 cut(s) | 847 |
| HphI | GGTGA | 3 cut(s) | 281, 424, 970 |
| Hpy166II | GTNNAC | 8 cut(s) | 42, 107, 432, 1001, 1173, 1315, 1777, 1839 |
| Hpy188I | TCNGA | 9 cut(s) | 159, 183, 333, 693, 739, 1059, 1531, 1683, 1702 |
| Hpy8I | GTNNAC | 8 cut(s) | 42, 107, 432, 1001, 1173, 1315, 1777, 1839 |
| Hpy99I | CGWCG | 1 cut(s) | 818 |
| HpyAV | CCTTC | 6 cut(s) | 222, 485, 535, 1176, 1642, 1765 |
| HpyCH4III | ACNGT | 6 cut(s) | 383, 519, 779, 1222, 1496, 1843 |
| HpyCH4IV | ACGT | 5 cut(s) | 550, 627, 990, 1813, 1818 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1433 |
| HpyF3I | CTNAG | 9 cut(s) | 24, 125, 158, 901, 1123, 1299, 1358, 1386, 1680 |
| HpySE526I | ACGT | 5 cut(s) | 550, 627, 990, 1813, 1818 |
| Hsp92II | CATG | 8 cut(s) | 380, 422, 439, 529, 881, 1163, 1696, 1807 |
| HspAI | GCGC | 1 cut(s) | 1738 |
| KpnI | GGTACC | 1 cut(s) | 1792 |
| Ksp22I | TGATCA | 3 cut(s) | 322, 373, 1582 |
| LmnI | GCTCC | 1 cut(s) | 1404 |
| Lsp1109I | GCAGC | 4 cut(s) | 917, 1445, 1617, 1620 |
| LweI | GCATC | 1 cut(s) | 1543 |
| MaeI | CTAG | 3 cut(s) | 347, 1718, 1785 |
| MaeII | ACGT | 5 cut(s) | 550, 627, 990, 1813, 1818 |
| MaeIII | GTNAC | 6 cut(s) | 113, 349, 422, 700, 1216, 1814 |
| MboII | GAAGA | 4 cut(s) | 235, 481, 606, 905 |
| MfeI | CAATTG | 3 cut(s) | 924, 1004, 1741 |
| MflI | RGATCY | 3 cut(s) | 328, 849, 1444 |
| MhlI | GDGCHC | 2 cut(s) | 1346, 1779 |
| MlyI | GAGTC | 2 cut(s) | 26, 1822 |
| MmeI | TCCRAC | 2 cut(s) | 430, 1301 |
| Mph1103I | ATGCAT | 1 cut(s) | 1558 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1032 |
| MspI | CCGG | 1 cut(s) | 847 |
| MspR9I | CCNGG | 1 cut(s) | 1602 |
| MunI | CAATTG | 3 cut(s) | 924, 1004, 1741 |
| Mva1269I | GAATGC | 1 cut(s) | 1859 |
| MvaI | CCWGG | 1 cut(s) | 1602 |
| MvnI | CGCG | 1 cut(s) | 1738 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1433 |
| NcoI | CCATGG | 2 cut(s) | 435, 877 |
| NdeI | CATATG | 2 cut(s) | 1107, 1970 |
| NlaIII | CATG | 8 cut(s) | 380, 422, 439, 529, 881, 1163, 1696, 1807 |
| NlaIV | GGNNCC | 5 cut(s) | 148, 330, 1446, 1725, 1790 |
| NmuCI | GTSAC | 2 cut(s) | 700, 1814 |
| NsiI | ATGCAT | 1 cut(s) | 1558 |
| PagI | TCATGA | 1 cut(s) | 376 |
| PceI | AGGCCT | 1 cut(s) | 865 |
| PctI | GAATGC | 1 cut(s) | 1859 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1032 |
| PfeI | GAWTC | 7 cut(s) | 58, 453, 710, 837, 1452, 1853, 1906 |
| PkrI | GCNGC | 4 cut(s) | 907, 1435, 1607, 1610 |
| Ple19I | CGATCG | 1 cut(s) | 191 |
| PleI | GAGTC | 2 cut(s) | 25, 1822 |
| PmaCI | CACGTG | 1 cut(s) | 1814 |
| PmlI | CACGTG | 1 cut(s) | 1814 |
| PpsI | GAGTC | 2 cut(s) | 25, 1822 |
| Ppu21I | YACGTR | 2 cut(s) | 991, 1814 |
| PshAI | GACNNNNGTC | 1 cut(s) | 384 |
| PshBI | ATTAAT | 5 cut(s) | 264, 570, 1050, 1067, 1325 |
| PsiI | TTATAA | 1 cut(s) | 314 |
| Psp1406I | AACGTT | 1 cut(s) | 627 |
| Psp6I | CCWGG | 1 cut(s) | 1600 |
| PspCI | CACGTG | 1 cut(s) | 1814 |
| PspEI | GGTNACC | 1 cut(s) | 422 |
| PspFI | CCCAGC | 1 cut(s) | 1081 |
| PspGI | CCWGG | 1 cut(s) | 1600 |
| PspN4I | GGNNCC | 5 cut(s) | 148, 330, 1446, 1725, 1790 |
| PspPI | GGNCC | 2 cut(s) | 147, 874 |
| PsuI | RGATCY | 3 cut(s) | 328, 849, 1444 |
| PvuI | CGATCG | 1 cut(s) | 191 |
| RsaI | GTAC | 6 cut(s) | 108, 635, 1400, 1501, 1621, 1790 |
| RsaNI | GTAC | 6 cut(s) | 107, 634, 1399, 1500, 1620, 1789 |
| SatI | GCNGC | 4 cut(s) | 906, 1434, 1606, 1609 |
| Sau96I | GGNCC | 2 cut(s) | 147, 874 |
| ScaI | AGTACT | 1 cut(s) | 1400 |
| SchI | GAGTC | 2 cut(s) | 26, 1822 |
| ScrFI | CCNGG | 1 cut(s) | 1602 |
| SduI | GDGCHC | 2 cut(s) | 1346, 1779 |
| SfaNI | GCATC | 1 cut(s) | 1543 |
| SinI | GGWCC | 2 cut(s) | 147, 874 |
| SmlI | CTYRAG | 1 cut(s) | 1538 |
| SmoI | CTYRAG | 1 cut(s) | 1538 |
| SpeI | ACTAGT | 1 cut(s) | 346 |
| SseBI | AGGCCT | 1 cut(s) | 865 |
| SsiI | CCGC | 3 cut(s) | 363, 1736, 1951 |
| SspI | AATATT | 1 cut(s) | 970 |
| SspMI | CTAG | 3 cut(s) | 347, 1718, 1785 |
| StuI | AGGCCT | 1 cut(s) | 865 |
| StyD4I | CCNGG | 1 cut(s) | 1600 |
| StyI | CCWWGG | 3 cut(s) | 435, 877, 1784 |
| TaaI | ACNGT | 6 cut(s) | 383, 519, 779, 1222, 1496, 1843 |
| TaiI | ACGT | 5 cut(s) | 553, 630, 993, 1816, 1821 |
| TaqI | TCGA | 8 cut(s) | 15, 191, 816, 973, 1087, 1642, 1894, 1918 |
| TatI | WGTACW | 3 cut(s) | 106, 1398, 1499 |
| TfiI | GAWTC | 7 cut(s) | 58, 453, 710, 837, 1452, 1853, 1906 |
| TscAI | CASTG | 3 cut(s) | 133, 1633, 1908 |
| TseFI | GTSAC | 2 cut(s) | 700, 1814 |
| TseI | GCWGC | 4 cut(s) | 905, 1433, 1605, 1608 |
| Tsp45I | GTSAC | 2 cut(s) | 700, 1814 |
| TspDTI | ATGAA | 6 cut(s) | 288, 357, 1041, 1394, 1475, 1902 |
| TspGWI | ACGGA | 3 cut(s) | 737, 802, 1219 |
| TspRI | CASTG | 3 cut(s) | 133, 1633, 1908 |
| VneI | GTGCAC | 1 cut(s) | 1775 |
| VpaK11BI | GGWCC | 2 cut(s) | 147, 874 |
| VspI | ATTAAT | 5 cut(s) | 264, 570, 1050, 1067, 1325 |
| XapI | RAATTY | 6 cut(s) | 531, 687, 694, 919, 1352, 1661 |
| XbaI | TCTAGA | 1 cut(s) | 1717 |
| XmaJI | CCTAGG | 1 cut(s) | 1784 |
| XmiI | GTMKAC | 1 cut(s) | 1172 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1032 |
| XspI | CTAG | 3 cut(s) | 347, 1718, 1785 |
| ZrmI | AGTACT | 1 cut(s) | 1400 |
| Zsp2I | ATGCAT | 1 cut(s) | 1558 |