Domain of unknown function (DUF4413)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1945 |
| Acc36I | ACCTGC | 1 cut(s) | 1945 |
| Acc65I | GGTACC | 1 cut(s) | 1791 |
| AccB1I | GGYRCC | 1 cut(s) | 1791 |
| AccBSI | CCGCTC | 1 cut(s) | 903 |
| AciI | CCGC | 2 cut(s) | 875, 901 |
| AclWI | GGATC | 8 cut(s) | 142, 186, 339, 707, 860, 1442, 1455, 1650 |
| AcsI | RAATTY | 3 cut(s) | 534, 922, 1664 |
| AcuI | CTGAAG | 2 cut(s) | 464, 1397 |
| AcvI | CACGTG | 1 cut(s) | 1817 |
| AfaI | GTAC | 4 cut(s) | 1014, 1504, 1624, 1793 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| AflIII | ACRYGT | 1 cut(s) | 991 |
| AjnI | CCWGG | 1 cut(s) | 1603 |
| AluBI | AGCT | 7 cut(s) | 23, 127, 679, 1388, 1549, 1614, 1902 |
| AluI | AGCT | 7 cut(s) | 23, 127, 679, 1388, 1549, 1614, 1902 |
| Alw26I | GTCTC | 1 cut(s) | 1670 |
| AlwI | GGATC | 8 cut(s) | 142, 186, 339, 707, 860, 1442, 1455, 1650 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 334 |
| AoxI | GGCC | 2 cut(s) | 253, 866 |
| ApeKI | GCWGC | 6 cut(s) | 221, 908, 1436, 1608, 1611, 1997 |
| ApoI | RAATTY | 3 cut(s) | 534, 922, 1664 |
| AseI | ATTAAT | 4 cut(s) | 267, 573, 1070, 1328 |
| Asp718I | GGTACC | 1 cut(s) | 1791 |
| AspLEI | GCGC | 1 cut(s) | 1375 |
| AspS9I | GGNCC | 2 cut(s) | 150, 1777 |
| AsuHPI | GGTGA | 1 cut(s) | 973 |
| AvaII | GGWCC | 2 cut(s) | 150, 1777 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1775, 1808 |
| BamHI | GGATCC | 1 cut(s) | 1447 |
| BanI | GGYRCC | 1 cut(s) | 1791 |
| BanII | GRGCYC | 1 cut(s) | 1349 |
| BbrPI | CACGTG | 1 cut(s) | 1817 |
| BbsI | GAAGAC | 1 cut(s) | 609 |
| BbvI | GCAGC | 6 cut(s) | 233, 895, 1448, 1620, 1623, 1984 |
| BccI | CCATC | 3 cut(s) | 757, 1529, 1804 |
| BciT130I | CCWGG | 1 cut(s) | 1605 |
| BclI | TGATCA | 3 cut(s) | 445, 1585, 1888 |
| BcoDI | GTCTC | 1 cut(s) | 1670 |
| BfaI | CTAG | 3 cut(s) | 1620, 1638, 2001 |
| BfoI | RGCGCY | 1 cut(s) | 1376 |
| BfuAI | ACCTGC | 1 cut(s) | 1945 |
| BisI | GCNGC | 6 cut(s) | 222, 909, 1437, 1609, 1612, 1998 |
| BlsI | GCNGC | 6 cut(s) | 223, 910, 1438, 1610, 1613, 1999 |
| BmcAI | AGTACT | 1 cut(s) | 1504 |
| Bme1390I | CCNGG | 1 cut(s) | 1605 |
| Bme18I | GGWCC | 2 cut(s) | 150, 1777 |
| BmgT120I | GGNCC | 2 cut(s) | 150, 1777 |
| BmiI | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| BmrFI | CCNGG | 1 cut(s) | 1605 |
| BmrI | ACTGGG | 2 cut(s) | 778, 1079 |
| BmsI | GCATC | 1 cut(s) | 1548 |
| BmuI | ACTGGG | 2 cut(s) | 778, 1079 |
| BoxI | GACNNNNGTC | 1 cut(s) | 387 |
| BpiI | GAAGAC | 1 cut(s) | 609 |
| BpmI | CTGGAG | 1 cut(s) | 606 |
| BpuEI | CTTGAG | 1 cut(s) | 1969 |
| Bsa29I | ATCGAT | 1 cut(s) | 1645 |
| BsaAI | YACGTR | 2 cut(s) | 994, 1817 |
| BsaBI | GATNNNNATC | 2 cut(s) | 330, 1974 |
| BsaJI | CCNNGG | 2 cut(s) | 438, 1787 |
| BsaWI | WCCGGW | 1 cut(s) | 849 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 839, 869 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| Bse1I | ACTGG | 4 cut(s) | 677, 773, 1085, 1730 |
| Bse3DI | GCAATG | 1 cut(s) | 357 |
| Bse8I | GATNNNNATC | 2 cut(s) | 330, 1974 |
| BseBI | CCWGG | 1 cut(s) | 1605 |
| BseCI | ATCGAT | 1 cut(s) | 1645 |
| BseDI | CCNNGG | 2 cut(s) | 438, 1787 |
| BseGI | GGATG | 4 cut(s) | 349, 811, 943, 1320 |
| BseJI | GATNNNNATC | 2 cut(s) | 330, 1974 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| BseMI | GCAATG | 1 cut(s) | 357 |
| BseMII | CTCAG | 6 cut(s) | 142, 152, 717, 827, 1293, 1697 |
| BseNI | ACTGG | 4 cut(s) | 677, 773, 1085, 1730 |
| BseRI | GAGGAG | 1 cut(s) | 1078 |
| BseXI | GCAGC | 6 cut(s) | 233, 895, 1448, 1620, 1623, 1984 |
| BseYI | CCCAGC | 1 cut(s) | 1038 |
| BsgI | GTGCAG | 4 cut(s) | 636, 894, 953, 1435 |
| BshFI | GGCC | 2 cut(s) | 255, 868 |
| BshNI | GGYRCC | 1 cut(s) | 1791 |
| BshVI | ATCGAT | 1 cut(s) | 1645 |
| BsiSI | CCGG | 1 cut(s) | 850 |
| BslFI | GGGAC | 1 cut(s) | 163 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 864, 875 |
| BsmAI | GTCTC | 1 cut(s) | 1670 |
| BsmFI | GGGAC | 1 cut(s) | 163 |
| BsmI | GAATGC | 1 cut(s) | 1862 |
| BsnI | GGCC | 2 cut(s) | 255, 868 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1349 |
| Bsp19I | CCATGG | 1 cut(s) | 438 |
| BspACI | CCGC | 2 cut(s) | 875, 901 |
| BspANI | GGCC | 2 cut(s) | 255, 868 |
| BspCNI | CTCAG | 6 cut(s) | 141, 153, 718, 828, 1294, 1696 |
| BspDI | ATCGAT | 1 cut(s) | 1645 |
| BspLI | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| BspMI | ACCTGC | 1 cut(s) | 1945 |
| BspPI | GGATC | 8 cut(s) | 142, 186, 339, 707, 860, 1442, 1455, 1650 |
| BspT107I | GGYRCC | 1 cut(s) | 1791 |
| BsrBI | CCGCTC | 1 cut(s) | 903 |
| BsrDI | GCAATG | 1 cut(s) | 357 |
| BsrI | ACTGG | 4 cut(s) | 677, 773, 1085, 1730 |
| BssECI | CCNNGG | 2 cut(s) | 438, 1787 |
| BssT1I | CCWWGG | 2 cut(s) | 438, 1787 |
| Bst2UI | CCWGG | 1 cut(s) | 1605 |
| Bst4CI | ACNGT | 4 cut(s) | 250, 386, 782, 1846 |
| BstBAI | YACGTR | 2 cut(s) | 994, 1817 |
| BstC8I | GCNNGC | 2 cut(s) | 309, 1926 |
| BstDEI | CTNAG | 9 cut(s) | 128, 161, 726, 836, 1126, 1302, 1361, 1389, 1683 |
| BstDSI | CCRYGG | 1 cut(s) | 438 |
| BstEII | GGTNACC | 1 cut(s) | 425 |
| BstF5I | GGATG | 4 cut(s) | 349, 811, 943, 1320 |
| BstH2I | RGCGCY | 1 cut(s) | 1376 |
| BstHHI | GCGC | 1 cut(s) | 1375 |
| BstMAI | GTCTC | 1 cut(s) | 1670 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1436 |
| BstNI | CCWGG | 1 cut(s) | 1605 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 387 |
| BstPI | GGTNACC | 1 cut(s) | 425 |
| BstSCI | CCNGG | 1 cut(s) | 1603 |
| BstV1I | GCAGC | 6 cut(s) | 233, 895, 1448, 1620, 1623, 1984 |
| BstV2I | GAAGAC | 1 cut(s) | 609 |
| BstX2I | RGATCY | 3 cut(s) | 331, 852, 1447 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1046, 1092 |
| BstYI | RGATCY | 3 cut(s) | 331, 852, 1447 |
| Bsu15I | ATCGAT | 1 cut(s) | 1645 |
| BsuRI | GGCC | 2 cut(s) | 255, 868 |
| BsuTUI | ATCGAT | 1 cut(s) | 1645 |
| BtgI | CCRYGG | 1 cut(s) | 438 |
| BtgZI | GCGATG | 1 cut(s) | 193 |
| BtsCI | GGATG | 4 cut(s) | 349, 811, 943, 1320 |
| BtsI | GCAGTG | 1 cut(s) | 1636 |
| BtsIMutI | CAGTG | 3 cut(s) | 136, 1636, 1904 |
| BveI | ACCTGC | 1 cut(s) | 1945 |
| Cac8I | GCNNGC | 2 cut(s) | 309, 1926 |
| CaiI | CAGNNNCTG | 1 cut(s) | 334 |
| CfoI | GCGC | 1 cut(s) | 1375 |
| Cfr13I | GGNCC | 2 cut(s) | 150, 1777 |
| ClaI | ATCGAT | 1 cut(s) | 1645 |
| CseI | GACGC | 1 cut(s) | 1565 |
| Csp6I | GTAC | 4 cut(s) | 1013, 1503, 1623, 1792 |
| CviAII | CATG | 6 cut(s) | 422, 439, 449, 881, 1163, 1313 |
| CviQI | GTAC | 4 cut(s) | 1013, 1503, 1623, 1792 |
| DdeI | CTNAG | 9 cut(s) | 128, 161, 726, 836, 1126, 1302, 1361, 1389, 1683 |
| Eco130I | CCWWGG | 2 cut(s) | 438, 1787 |
| Eco147I | AGGCCT | 1 cut(s) | 868 |
| Eco24I | GRGCYC | 1 cut(s) | 1349 |
| Eco32I | GATATC | 3 cut(s) | 349, 898, 1701 |
| Eco47I | GGWCC | 2 cut(s) | 150, 1777 |
| Eco57I | CTGAAG | 2 cut(s) | 464, 1397 |
| Eco72I | CACGTG | 1 cut(s) | 1817 |
| Eco91I | GGTNACC | 1 cut(s) | 425 |
| EcoO65I | GGTNACC | 1 cut(s) | 425 |
| EcoRII | CCWGG | 1 cut(s) | 1603 |
| EcoRV | GATATC | 3 cut(s) | 349, 898, 1701 |
| EcoT14I | CCWWGG | 2 cut(s) | 438, 1787 |
| EcoT38I | GRGCYC | 1 cut(s) | 1349 |
| ErhI | CCWWGG | 2 cut(s) | 438, 1787 |
| FaeI | CATG | 6 cut(s) | 425, 442, 452, 884, 1166, 1316 |
| FaqI | GGGAC | 1 cut(s) | 163 |
| FatI | CATG | 6 cut(s) | 421, 438, 448, 880, 1162, 1312 |
| FauI | CCCGC | 1 cut(s) | 868 |
| FbaI | TGATCA | 3 cut(s) | 445, 1585, 1888 |
| Fnu4HI | GCNGC | 6 cut(s) | 222, 909, 1437, 1609, 1612, 1998 |
| FokI | GGATG | 4 cut(s) | 356, 818, 950, 1307 |
| FriOI | GRGCYC | 1 cut(s) | 1349 |
| Fsp4HI | GCNGC | 6 cut(s) | 222, 909, 1437, 1609, 1612, 1998 |
| FspBI | CTAG | 3 cut(s) | 1620, 1638, 2001 |
| GlaI | GCGC | 1 cut(s) | 1374 |
| GluI | GCNGC | 6 cut(s) | 222, 909, 1437, 1609, 1612, 1998 |
| GsaI | CCCAGC | 1 cut(s) | 1042 |
| GsuI | CTGGAG | 1 cut(s) | 606 |
| HaeII | RGCGCY | 1 cut(s) | 1376 |
| HaeIII | GGCC | 2 cut(s) | 255, 868 |
| HapII | CCGG | 1 cut(s) | 850 |
| HgaI | GACGC | 1 cut(s) | 1565 |
| HhaI | GCGC | 1 cut(s) | 1375 |
| Hin1II | CATG | 6 cut(s) | 425, 442, 452, 884, 1166, 1316 |
| Hin6I | GCGC | 1 cut(s) | 1373 |
| HinP1I | GCGC | 1 cut(s) | 1373 |
| HincII | GTYRAC | 3 cut(s) | 45, 435, 1842 |
| HindII | GTYRAC | 3 cut(s) | 45, 435, 1842 |
| HpaII | CCGG | 1 cut(s) | 850 |
| HphI | GGTGA | 1 cut(s) | 973 |
| Hpy166II | GTNNAC | 6 cut(s) | 45, 435, 1004, 1318, 1780, 1842 |
| Hpy188I | TCNGA | 9 cut(s) | 162, 336, 696, 742, 762, 837, 1534, 1686, 1705 |
| Hpy8I | GTNNAC | 6 cut(s) | 45, 435, 1004, 1318, 1780, 1842 |
| HpyAV | CCTTC | 6 cut(s) | 225, 488, 805, 1179, 1645, 1768 |
| HpyCH4III | ACNGT | 4 cut(s) | 250, 386, 782, 1846 |
| HpyCH4IV | ACGT | 4 cut(s) | 513, 553, 993, 1816 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1436 |
| HpyF3I | CTNAG | 9 cut(s) | 128, 161, 726, 836, 1126, 1302, 1361, 1389, 1683 |
| HpySE526I | ACGT | 4 cut(s) | 513, 553, 993, 1816 |
| Hsp92II | CATG | 6 cut(s) | 425, 442, 452, 884, 1166, 1316 |
| HspAI | GCGC | 1 cut(s) | 1373 |
| KpnI | GGTACC | 1 cut(s) | 1795 |
| Ksp22I | TGATCA | 3 cut(s) | 445, 1585, 1888 |
| LmnI | GCTCC | 2 cut(s) | 1407, 1546 |
| Lsp1109I | GCAGC | 6 cut(s) | 233, 895, 1448, 1620, 1623, 1984 |
| LweI | GCATC | 1 cut(s) | 1548 |
| MaeI | CTAG | 3 cut(s) | 1620, 1638, 2001 |
| MaeII | ACGT | 4 cut(s) | 513, 553, 993, 1816 |
| MaeIII | GTNAC | 5 cut(s) | 116, 352, 425, 703, 1219 |
| MbiI | CCGCTC | 1 cut(s) | 903 |
| MboII | GAAGA | 4 cut(s) | 600, 609, 908, 1390 |
| MfeI | CAATTG | 1 cut(s) | 927 |
| MflI | RGATCY | 3 cut(s) | 331, 852, 1447 |
| MhlI | GDGCHC | 1 cut(s) | 1349 |
| MlyI | GAGTC | 2 cut(s) | 26, 725 |
| MmeI | TCCRAC | 5 cut(s) | 219, 433, 924, 1027, 1304 |
| MspI | CCGG | 1 cut(s) | 850 |
| MspR9I | CCNGG | 1 cut(s) | 1605 |
| MunI | CAATTG | 1 cut(s) | 927 |
| Mva1269I | GAATGC | 1 cut(s) | 1862 |
| MvaI | CCWGG | 1 cut(s) | 1605 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1436 |
| NcoI | CCATGG | 1 cut(s) | 438 |
| NlaIII | CATG | 6 cut(s) | 425, 442, 452, 884, 1166, 1316 |
| NlaIV | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| NmuCI | GTSAC | 1 cut(s) | 703 |
| PaqCI | CACCTGC | 1 cut(s) | 1945 |
| PceI | AGGCCT | 1 cut(s) | 868 |
| PctI | GAATGC | 1 cut(s) | 1862 |
| PfeI | GAWTC | 8 cut(s) | 61, 456, 973, 1050, 1455, 1856, 1909, 2018 |
| PkrI | GCNGC | 6 cut(s) | 223, 910, 1438, 1610, 1613, 1999 |
| PleI | GAGTC | 2 cut(s) | 25, 725 |
| PmaCI | CACGTG | 1 cut(s) | 1817 |
| PmlI | CACGTG | 1 cut(s) | 1817 |
| PpsI | GAGTC | 2 cut(s) | 25, 725 |
| Ppu21I | YACGTR | 2 cut(s) | 994, 1817 |
| PshAI | GACNNNNGTC | 1 cut(s) | 387 |
| PshBI | ATTAAT | 4 cut(s) | 267, 573, 1070, 1328 |
| Psp6I | CCWGG | 1 cut(s) | 1603 |
| PspCI | CACGTG | 1 cut(s) | 1817 |
| PspEI | GGTNACC | 1 cut(s) | 425 |
| PspFI | CCCAGC | 1 cut(s) | 1038 |
| PspGI | CCWGG | 1 cut(s) | 1603 |
| PspN4I | GGNNCC | 4 cut(s) | 151, 1449, 1728, 1793 |
| PspPI | GGNCC | 2 cut(s) | 150, 1777 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1088, 1120 |
| PstNI | CAGNNNCTG | 1 cut(s) | 334 |
| PsuI | RGATCY | 3 cut(s) | 331, 852, 1447 |
| RsaI | GTAC | 4 cut(s) | 1014, 1504, 1624, 1793 |
| RsaNI | GTAC | 4 cut(s) | 1013, 1503, 1623, 1792 |
| SatI | GCNGC | 6 cut(s) | 222, 909, 1437, 1609, 1612, 1998 |
| Sau96I | GGNCC | 2 cut(s) | 150, 1777 |
| ScaI | AGTACT | 1 cut(s) | 1504 |
| SchI | GAGTC | 2 cut(s) | 26, 725 |
| ScrFI | CCNGG | 1 cut(s) | 1605 |
| SduI | GDGCHC | 1 cut(s) | 1349 |
| SfaNI | GCATC | 1 cut(s) | 1548 |
| SinI | GGWCC | 2 cut(s) | 150, 1777 |
| SmlI | CTYRAG | 1 cut(s) | 1984 |
| SmoI | CTYRAG | 1 cut(s) | 1984 |
| SseBI | AGGCCT | 1 cut(s) | 868 |
| SsiI | CCGC | 2 cut(s) | 875, 901 |
| SspI | AATATT | 3 cut(s) | 265, 1403, 1718 |
| SspMI | CTAG | 3 cut(s) | 1620, 1638, 2001 |
| StuI | AGGCCT | 1 cut(s) | 868 |
| StyD4I | CCNGG | 1 cut(s) | 1603 |
| StyI | CCWWGG | 2 cut(s) | 438, 1787 |
| TaaI | ACNGT | 4 cut(s) | 250, 386, 782, 1846 |
| TaiI | ACGT | 4 cut(s) | 516, 556, 996, 1819 |
| TaqI | TCGA | 4 cut(s) | 324, 976, 1645, 1897 |
| TatI | WGTACW | 1 cut(s) | 1502 |
| TfiI | GAWTC | 8 cut(s) | 61, 456, 973, 1050, 1455, 1856, 1909, 2018 |
| TscAI | CASTG | 3 cut(s) | 136, 1636, 1911 |
| TseFI | GTSAC | 1 cut(s) | 703 |
| TseI | GCWGC | 6 cut(s) | 221, 908, 1436, 1608, 1611, 1997 |
| Tsp45I | GTSAC | 1 cut(s) | 703 |
| TspDTI | ATGAA | 6 cut(s) | 291, 309, 317, 1170, 1397, 1478 |
| TspRI | CASTG | 3 cut(s) | 136, 1636, 1911 |
| VpaK11BI | GGWCC | 2 cut(s) | 150, 1777 |
| VspI | ATTAAT | 4 cut(s) | 267, 573, 1070, 1328 |
| XapI | RAATTY | 3 cut(s) | 534, 922, 1664 |
| XspI | CTAG | 3 cut(s) | 1620, 1638, 2001 |
| ZrmI | AGTACT | 1 cut(s) | 1504 |