Domain of unknown function (DUF4413)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-BED | PF02892 | 18 - 60 | 1.7e-07 | BED zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 314 |
| AciI | CCGC | 1 cut(s) | 363 |
| AclWI | GGATC | 3 cut(s) | 139, 323, 336 |
| AfaI | GTAC | 1 cut(s) | 108 |
| AgsI | TTSAA | 1 cut(s) | 68 |
| AhlI | ACTAGT | 1 cut(s) | 346 |
| AluBI | AGCT | 1 cut(s) | 124 |
| AluI | AGCT | 1 cut(s) | 124 |
| AlwI | GGATC | 3 cut(s) | 139, 323, 336 |
| AseI | ATTAAT | 1 cut(s) | 264 |
| AspS9I | GGNCC | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 2 cut(s) | 281, 425 |
| AvaII | GGWCC | 1 cut(s) | 147 |
| BamHI | GGATCC | 1 cut(s) | 328 |
| BccI | CCATC | 1 cut(s) | 162 |
| BclI | TGATCA | 2 cut(s) | 322, 373 |
| BcuI | ACTAGT | 1 cut(s) | 346 |
| BfaI | CTAG | 1 cut(s) | 347 |
| Bme18I | GGWCC | 1 cut(s) | 147 |
| BmgT120I | GGNCC | 1 cut(s) | 147 |
| BmiI | GGNNCC | 2 cut(s) | 148, 330 |
| BoxI | GACNNNNGTC | 1 cut(s) | 384 |
| Bsa29I | ATCGAT | 1 cut(s) | 394 |
| BsaBI | GATNNNNATC | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 1 cut(s) | 436 |
| Bse1I | ACTGG | 1 cut(s) | 11 |
| Bse3DI | GCAATG | 1 cut(s) | 354 |
| Bse8I | GATNNNNATC | 1 cut(s) | 327 |
| BseCI | ATCGAT | 1 cut(s) | 394 |
| BseDI | CCNNGG | 1 cut(s) | 436 |
| BseGI | GGATG | 1 cut(s) | 346 |
| BseJI | GATNNNNATC | 1 cut(s) | 327 |
| BseMI | GCAATG | 1 cut(s) | 354 |
| BseMII | CTCAG | 2 cut(s) | 139, 149 |
| BseNI | ACTGG | 1 cut(s) | 11 |
| Bsh1285I | CGRYCG | 1 cut(s) | 191 |
| BshVI | ATCGAT | 1 cut(s) | 394 |
| BsiEI | CGRYCG | 1 cut(s) | 191 |
| BslFI | GGGAC | 1 cut(s) | 160 |
| BsmFI | GGGAC | 1 cut(s) | 160 |
| Bsp1407I | TGTACA | 1 cut(s) | 106 |
| Bsp143I | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| Bsp19I | CCATGG | 1 cut(s) | 436 |
| BspACI | CCGC | 1 cut(s) | 363 |
| BspCNI | CTCAG | 2 cut(s) | 138, 150 |
| BspDI | ATCGAT | 1 cut(s) | 394 |
| BspHI | TCATGA | 1 cut(s) | 376 |
| BspLI | GGNNCC | 2 cut(s) | 148, 330 |
| BspPI | GGATC | 3 cut(s) | 139, 323, 336 |
| BsrDI | GCAATG | 1 cut(s) | 354 |
| BsrGI | TGTACA | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 11 |
| BssECI | CCNNGG | 1 cut(s) | 436 |
| BssMI | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| BssT1I | CCWWGG | 1 cut(s) | 436 |
| Bst4CI | ACNGT | 1 cut(s) | 383 |
| Bst6I | CTCTTC | 1 cut(s) | 218 |
| BstAUI | TGTACA | 1 cut(s) | 106 |
| BstC8I | GCNNGC | 2 cut(s) | 306, 361 |
| BstDEI | CTNAG | 3 cut(s) | 24, 125, 158 |
| BstDSI | CCRYGG | 1 cut(s) | 436 |
| BstEII | GGTNACC | 1 cut(s) | 423 |
| BstF5I | GGATG | 1 cut(s) | 346 |
| BstKTI | GATC | 6 cut(s) | 134, 191, 325, 331, 376, 398 |
| BstMBI | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| BstMCI | CGRYCG | 1 cut(s) | 191 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 384 |
| BstPI | GGTNACC | 1 cut(s) | 423 |
| BstX2I | RGATCY | 1 cut(s) | 328 |
| BstYI | RGATCY | 1 cut(s) | 328 |
| Bsu15I | ATCGAT | 1 cut(s) | 394 |
| BsuTUI | ATCGAT | 1 cut(s) | 394 |
| BtgI | CCRYGG | 1 cut(s) | 436 |
| BtgZI | GCGATG | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 346 |
| BtsIMutI | CAGTG | 1 cut(s) | 133 |
| Cac8I | GCNNGC | 2 cut(s) | 306, 361 |
| CciI | TCATGA | 1 cut(s) | 376 |
| Cfr13I | GGNCC | 1 cut(s) | 147 |
| ClaI | ATCGAT | 1 cut(s) | 394 |
| Csp6I | GTAC | 1 cut(s) | 107 |
| CviAII | CATG | 3 cut(s) | 377, 420, 437 |
| CviJI | RGCY | 3 cut(s) | 83, 124, 304 |
| CviKI_1 | RGCY | 3 cut(s) | 83, 124, 304 |
| CviQI | GTAC | 1 cut(s) | 107 |
| DdeI | CTNAG | 3 cut(s) | 24, 125, 158 |
| DpnI | GATC | 6 cut(s) | 133, 190, 324, 330, 375, 397 |
| DpnII | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| Eam1104I | CTCTTC | 1 cut(s) | 218 |
| EarI | CTCTTC | 1 cut(s) | 218 |
| Eco130I | CCWWGG | 1 cut(s) | 436 |
| Eco47I | GGWCC | 1 cut(s) | 147 |
| Eco91I | GGTNACC | 1 cut(s) | 423 |
| EcoO65I | GGTNACC | 1 cut(s) | 423 |
| EcoT14I | CCWWGG | 1 cut(s) | 436 |
| ErhI | CCWWGG | 1 cut(s) | 436 |
| FaeI | CATG | 3 cut(s) | 380, 423, 440 |
| FaiI | YATR | 9 cut(s) | 91, 96, 254, 297, 314, 378, 408, 421, 438 |
| FaqI | GGGAC | 1 cut(s) | 160 |
| FatI | CATG | 3 cut(s) | 376, 419, 436 |
| FbaI | TGATCA | 2 cut(s) | 322, 373 |
| FokI | GGATG | 1 cut(s) | 353 |
| FspBI | CTAG | 1 cut(s) | 347 |
| Hin1II | CATG | 3 cut(s) | 380, 423, 440 |
| HincII | GTYRAC | 1 cut(s) | 42 |
| HindII | GTYRAC | 1 cut(s) | 42 |
| HinfI | GANTC | 2 cut(s) | 17, 58 |
| HphI | GGTGA | 2 cut(s) | 281, 425 |
| Hpy166II | GTNNAC | 3 cut(s) | 42, 107, 433 |
| Hpy188I | TCNGA | 2 cut(s) | 159, 183 |
| Hpy188III | TCNNGA | 3 cut(s) | 55, 326, 377 |
| Hpy8I | GTNNAC | 3 cut(s) | 42, 107, 433 |
| HpyAV | CCTTC | 1 cut(s) | 222 |
| HpyCH4III | ACNGT | 1 cut(s) | 383 |
| HpyCH4V | TGCA | 2 cut(s) | 359, 419 |
| HpyF3I | CTNAG | 3 cut(s) | 24, 125, 158 |
| Hsp92II | CATG | 3 cut(s) | 380, 423, 440 |
| Ksp22I | TGATCA | 2 cut(s) | 322, 373 |
| Kzo9I | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| LpnPI | CCDG | 4 cut(s) | 24, 40, 311, 318 |
| MaeI | CTAG | 1 cut(s) | 347 |
| MaeIII | GTNAC | 3 cut(s) | 113, 349, 423 |
| MalI | GATC | 6 cut(s) | 133, 190, 324, 330, 375, 397 |
| MboI | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| MboII | GAAGA | 1 cut(s) | 235 |
| MflI | RGATCY | 1 cut(s) | 328 |
| MlyI | GAGTC | 1 cut(s) | 26 |
| MnlI | CCTC | 1 cut(s) | 30 |
| MseI | TTAA | 2 cut(s) | 170, 264 |
| NcoI | CCATGG | 1 cut(s) | 436 |
| NdeII | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| NlaIII | CATG | 3 cut(s) | 380, 423, 440 |
| NlaIV | GGNNCC | 2 cut(s) | 148, 330 |
| PagI | TCATGA | 1 cut(s) | 376 |
| PfeI | GAWTC | 1 cut(s) | 58 |
| Ple19I | CGATCG | 1 cut(s) | 191 |
| PleI | GAGTC | 1 cut(s) | 25 |
| PpsI | GAGTC | 1 cut(s) | 25 |
| PshAI | GACNNNNGTC | 1 cut(s) | 384 |
| PshBI | ATTAAT | 1 cut(s) | 264 |
| PsiI | TTATAA | 1 cut(s) | 314 |
| PspEI | GGTNACC | 1 cut(s) | 423 |
| PspN4I | GGNNCC | 2 cut(s) | 148, 330 |
| PspPI | GGNCC | 1 cut(s) | 147 |
| PsuI | RGATCY | 1 cut(s) | 328 |
| PvuI | CGATCG | 1 cut(s) | 191 |
| RsaI | GTAC | 1 cut(s) | 108 |
| RsaNI | GTAC | 1 cut(s) | 107 |
| SaqAI | TTAA | 2 cut(s) | 170, 264 |
| Sau3AI | GATC | 6 cut(s) | 131, 188, 322, 328, 373, 395 |
| Sau96I | GGNCC | 1 cut(s) | 147 |
| SchI | GAGTC | 1 cut(s) | 26 |
| SetI | ASST | 2 cut(s) | 41, 126 |
| SinI | GGWCC | 1 cut(s) | 147 |
| SpeI | ACTAGT | 1 cut(s) | 346 |
| SsiI | CCGC | 1 cut(s) | 363 |
| SspMI | CTAG | 1 cut(s) | 347 |
| StyI | CCWWGG | 1 cut(s) | 436 |
| TaaI | ACNGT | 1 cut(s) | 383 |
| TaqI | TCGA | 3 cut(s) | 15, 191, 394 |
| TatI | WGTACW | 1 cut(s) | 106 |
| TfiI | GAWTC | 1 cut(s) | 58 |
| Tru1I | TTAA | 2 cut(s) | 170, 264 |
| Tru9I | TTAA | 2 cut(s) | 170, 264 |
| TscAI | CASTG | 1 cut(s) | 133 |
| TspDTI | ATGAA | 2 cut(s) | 288, 357 |
| TspRI | CASTG | 1 cut(s) | 133 |
| VpaK11BI | GGWCC | 1 cut(s) | 147 |
| VspI | ATTAAT | 1 cut(s) | 264 |
| XspI | CTAG | 1 cut(s) | 347 |