Isopentenyl-diphosphate Delta-isomerase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 694 |
| Acc36I | ACCTGC | 2 cut(s) | 694, 823 |
| AccI | GTMKAC | 1 cut(s) | 270 |
| AccII | CGCG | 3 cut(s) | 20, 71, 1432 |
| AciI | CCGC | 8 cut(s) | 62, 69, 71, 74, 163, 723, 1430, 1643 |
| AclWI | GGATC | 1 cut(s) | 850 |
| AcoI | YGGCCR | 2 cut(s) | 184, 814 |
| AcsI | RAATTY | 1 cut(s) | 600 |
| AcuI | CTGAAG | 2 cut(s) | 780, 1616 |
| AcyI | GRCGYC | 1 cut(s) | 93 |
| AdeI | CACNNNGTG | 1 cut(s) | 1574 |
| AfaI | GTAC | 5 cut(s) | 99, 236, 547, 776, 952 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1217 |
| AflIII | ACRYGT | 2 cut(s) | 1258, 1395 |
| AgsI | TTSAA | 4 cut(s) | 151, 262, 605, 1445 |
| AjnI | CCWGG | 4 cut(s) | 874, 1074, 1294, 1450 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 104, 136 |
| AluBI | AGCT | 9 cut(s) | 109, 256, 367, 460, 488, 587, 596, 866, 1138 |
| AluI | AGCT | 9 cut(s) | 109, 256, 367, 460, 488, 587, 596, 866, 1138 |
| Alw21I | GWGCWC | 3 cut(s) | 258, 717, 1351 |
| Alw26I | GTCTC | 3 cut(s) | 76, 292, 1666 |
| Alw44I | GTGCAC | 1 cut(s) | 1347 |
| AlwI | GGATC | 1 cut(s) | 850 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 109 |
| Ama87I | CYCGRG | 1 cut(s) | 251 |
| AoxI | GGCC | 3 cut(s) | 184, 294, 814 |
| ApaLI | GTGCAC | 1 cut(s) | 1347 |
| ApoI | RAATTY | 1 cut(s) | 600 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1297, 1329 |
| AspLEI | GCGC | 3 cut(s) | 20, 22, 1594 |
| AspS9I | GGNCC | 2 cut(s) | 130, 220 |
| AsuC2I | CCSGG | 2 cut(s) | 626, 840 |
| AsuHPI | GGTGA | 4 cut(s) | 151, 361, 746, 1214 |
| AvaI | CYCGRG | 1 cut(s) | 251 |
| AvaII | GGWCC | 2 cut(s) | 130, 220 |
| BaeGI | GKGCMC | 2 cut(s) | 1351, 1640 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 777, 810 |
| BalI | TGGCCA | 1 cut(s) | 816 |
| BanII | GRGCYC | 2 cut(s) | 258, 824 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 38 |
| BbsI | GAAGAC | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 3 cut(s) | 258, 717, 1351 |
| BccI | CCATC | 4 cut(s) | 373, 731, 979, 1219 |
| BceAI | ACGGC | 3 cut(s) | 80, 199, 320 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 352, 377, 386, 411 |
| BciT130I | CCWGG | 4 cut(s) | 876, 1076, 1296, 1452 |
| BcnI | CCSGG | 2 cut(s) | 626, 840 |
| BcoDI | GTCTC | 3 cut(s) | 76, 292, 1666 |
| BfaI | CTAG | 3 cut(s) | 419, 468, 948 |
| BfmI | CTRYAG | 1 cut(s) | 23 |
| BfuAI | ACCTGC | 2 cut(s) | 694, 823 |
| BlpI | GCTNAGC | 2 cut(s) | 1080, 1161 |
| BmcAI | AGTACT | 1 cut(s) | 236 |
| Bme1390I | CCNGG | 6 cut(s) | 626, 840, 876, 1076, 1296, 1452 |
| Bme18I | GGWCC | 2 cut(s) | 130, 220 |
| BmeT110I | CYCGRG | 1 cut(s) | 251 |
| BmgT120I | GGNCC | 2 cut(s) | 130, 220 |
| BmiI | GGNNCC | 2 cut(s) | 837, 1516 |
| BmrFI | CCNGG | 6 cut(s) | 626, 840, 876, 1076, 1296, 1452 |
| BmsI | GCATC | 7 cut(s) | 342, 709, 819, 878, 1038, 1141, 1527 |
| BpiI | GAAGAC | 1 cut(s) | 180 |
| BpmI | CTGGAG | 1 cut(s) | 648 |
| Bpu10I | CCTNAGC | 2 cut(s) | 227, 588 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1080, 1161 |
| BpuEI | CTTGAG | 1 cut(s) | 101 |
| BpuMI | CCSGG | 2 cut(s) | 626, 840 |
| BsaHI | GRCGYC | 1 cut(s) | 93 |
| BsaI | GGTCTC | 1 cut(s) | 292 |
| BsaJI | CCNNGG | 7 cut(s) | 9, 69, 240, 291, 336, 941, 1294 |
| BsaWI | WCCGGW | 1 cut(s) | 562 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 30, 60, 901, 931, 958, 988 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1217 |
| Bse118I | RCCGGY | 1 cut(s) | 346 |
| Bse1I | ACTGG | 3 cut(s) | 232, 1174, 1531 |
| BseBI | CCWGG | 4 cut(s) | 876, 1076, 1296, 1452 |
| BseDI | CCNNGG | 7 cut(s) | 9, 69, 240, 291, 336, 941, 1294 |
| BseGI | GGATG | 1 cut(s) | 1651 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1217 |
| BseMII | CTCAG | 6 cut(s) | 218, 602, 1094, 1175, 1379, 1616 |
| BseNI | ACTGG | 3 cut(s) | 232, 1174, 1531 |
| BsePI | GCGCGC | 1 cut(s) | 18 |
| BseRI | GAGGAG | 2 cut(s) | 966, 1050 |
| BseSI | GKGCMC | 2 cut(s) | 1351, 1640 |
| BsgI | GTGCAG | 1 cut(s) | 672 |
| Bsh1236I | CGCG | 3 cut(s) | 20, 71, 1432 |
| BshFI | GGCC | 3 cut(s) | 186, 296, 816 |
| BsiHKAI | GWGCWC | 3 cut(s) | 258, 717, 1351 |
| BsiHKCI | CYCGRG | 1 cut(s) | 251 |
| BsiSI | CCGG | 5 cut(s) | 347, 374, 563, 625, 840 |
| BslFI | GGGAC | 3 cut(s) | 659, 1167, 1247 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1217 |
| BsmAI | GTCTC | 3 cut(s) | 76, 292, 1666 |
| BsmFI | GGGAC | 3 cut(s) | 659, 1167, 1247 |
| BsmI | GAATGC | 4 cut(s) | 165, 558, 1110, 1440 |
| BsnI | GGCC | 3 cut(s) | 186, 296, 816 |
| Bso31I | GGTCTC | 1 cut(s) | 292 |
| BsoBI | CYCGRG | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 5 cut(s) | 258, 717, 824, 1351, 1640 |
| Bsp143I | GATC | 2 cut(s) | 842, 860 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1080, 1161 |
| Bsp19I | CCATGG | 2 cut(s) | 9, 240 |
| BspACI | CCGC | 8 cut(s) | 62, 69, 71, 74, 163, 723, 1430, 1643 |
| BspANI | GGCC | 3 cut(s) | 186, 296, 816 |
| BspCNI | CTCAG | 6 cut(s) | 219, 601, 1093, 1174, 1378, 1615 |
| BspFNI | CGCG | 3 cut(s) | 20, 71, 1432 |
| BspLI | GGNNCC | 2 cut(s) | 837, 1516 |
| BspMI | ACCTGC | 2 cut(s) | 694, 823 |
| BspPI | GGATC | 1 cut(s) | 850 |
| BspQI | GCTCTTC | 1 cut(s) | 263 |
| BspTNI | GGTCTC | 1 cut(s) | 292 |
| BsrFI | RCCGGY | 1 cut(s) | 346 |
| BsrI | ACTGG | 3 cut(s) | 232, 1174, 1531 |
| BssAI | RCCGGY | 1 cut(s) | 346 |
| BssECI | CCNNGG | 7 cut(s) | 9, 69, 240, 291, 336, 941, 1294 |
| BssHII | GCGCGC | 1 cut(s) | 18 |
| BssMI | GATC | 2 cut(s) | 842, 860 |
| BssNI | GRCGYC | 1 cut(s) | 93 |
| BssT1I | CCWWGG | 4 cut(s) | 9, 240, 291, 941 |
| Bst2UI | CCWGG | 4 cut(s) | 876, 1076, 1296, 1452 |
| Bst4CI | ACNGT | 2 cut(s) | 657, 1353 |
| Bst6I | CTCTTC | 1 cut(s) | 263 |
| BstACI | GRCGYC | 1 cut(s) | 93 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1138, 1147 |
| BstC8I | GCNNGC | 4 cut(s) | 20, 193, 750, 992 |
| BstDEI | CTNAG | 8 cut(s) | 227, 399, 588, 1080, 1161, 1319, 1365, 1602 |
| BstDSI | CCRYGG | 4 cut(s) | 9, 69, 240, 336 |
| BstEII | GGTNACC | 2 cut(s) | 657, 1220 |
| BstF5I | GGATG | 1 cut(s) | 1651 |
| BstFNI | CGCG | 3 cut(s) | 20, 71, 1432 |
| BstHHI | GCGC | 3 cut(s) | 20, 22, 1594 |
| BstKTI | GATC | 2 cut(s) | 845, 863 |
| BstMAI | GTCTC | 3 cut(s) | 76, 292, 1666 |
| BstMBI | GATC | 2 cut(s) | 842, 860 |
| BstNI | CCWGG | 4 cut(s) | 876, 1076, 1296, 1452 |
| BstNSI | RCATGY | 2 cut(s) | 1262, 1399 |
| BstPI | GGTNACC | 2 cut(s) | 657, 1220 |
| BstSCI | CCNGG | 6 cut(s) | 624, 838, 874, 1074, 1294, 1450 |
| BstSFI | CTRYAG | 1 cut(s) | 23 |
| BstSLI | GKGCMC | 2 cut(s) | 1351, 1640 |
| BstUI | CGCG | 3 cut(s) | 20, 71, 1432 |
| BstV2I | GAAGAC | 1 cut(s) | 180 |
| BsuRI | GGCC | 3 cut(s) | 186, 296, 816 |
| BtgI | CCRYGG | 4 cut(s) | 9, 69, 240, 336 |
| BtsCI | GGATG | 1 cut(s) | 1651 |
| BtsI | GCAGTG | 1 cut(s) | 1127 |
| BtsIMutI | CAGTG | 2 cut(s) | 1127, 1349 |
| BveI | ACCTGC | 2 cut(s) | 694, 823 |
| Cac8I | GCNNGC | 4 cut(s) | 20, 193, 750, 992 |
| CaiI | CAGNNNCTG | 1 cut(s) | 109 |
| CfoI | GCGC | 3 cut(s) | 20, 22, 1594 |
| Cfr10I | RCCGGY | 1 cut(s) | 346 |
| Cfr13I | GGNCC | 2 cut(s) | 130, 220 |
| Cfr42I | CCGCGG | 1 cut(s) | 72 |
| CseI | GACGC | 3 cut(s) | 101, 656, 753 |
| Csp6I | GTAC | 5 cut(s) | 98, 235, 546, 775, 951 |
| CviAII | CATG | 9 cut(s) | 10, 241, 1142, 1184, 1259, 1268, 1396, 1562, 1588 |
| CviQI | GTAC | 5 cut(s) | 98, 235, 546, 775, 951 |
| DdeI | CTNAG | 8 cut(s) | 227, 399, 588, 1080, 1161, 1319, 1365, 1602 |
| DpnI | GATC | 2 cut(s) | 844, 862 |
| DpnII | GATC | 2 cut(s) | 842, 860 |
| DraIII | CACNNNGTG | 1 cut(s) | 1574 |
| EaeI | YGGCCR | 2 cut(s) | 184, 814 |
| Eam1104I | CTCTTC | 1 cut(s) | 263 |
| EarI | CTCTTC | 1 cut(s) | 263 |
| Ecl136II | GAGCTC | 1 cut(s) | 256 |
| Eco130I | CCWWGG | 4 cut(s) | 9, 240, 291, 941 |
| Eco147I | AGGCCT | 1 cut(s) | 296 |
| Eco24I | GRGCYC | 2 cut(s) | 258, 824 |
| Eco31I | GGTCTC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 2 cut(s) | 130, 220 |
| Eco53kI | GAGCTC | 1 cut(s) | 256 |
| Eco57I | CTGAAG | 2 cut(s) | 780, 1616 |
| Eco88I | CYCGRG | 1 cut(s) | 251 |
| Eco91I | GGTNACC | 2 cut(s) | 657, 1220 |
| EcoICRI | GAGCTC | 1 cut(s) | 256 |
| EcoO109I | RGGNCCY | 1 cut(s) | 220 |
| EcoO65I | GGTNACC | 2 cut(s) | 657, 1220 |
| EcoRII | CCWGG | 4 cut(s) | 874, 1074, 1294, 1450 |
| EcoT14I | CCWWGG | 4 cut(s) | 9, 240, 291, 941 |
| EcoT22I | ATGCAT | 1 cut(s) | 702 |
| EcoT38I | GRGCYC | 2 cut(s) | 258, 824 |
| ErhI | CCWWGG | 4 cut(s) | 9, 240, 291, 941 |
| FaeI | CATG | 9 cut(s) | 13, 244, 1145, 1187, 1262, 1271, 1399, 1565, 1591 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1462, 1494 |
| FaqI | GGGAC | 3 cut(s) | 659, 1167, 1247 |
| FatI | CATG | 9 cut(s) | 9, 240, 1141, 1183, 1258, 1267, 1395, 1561, 1587 |
| FauI | CCCGC | 2 cut(s) | 76, 170 |
| FauNDI | CATATG | 1 cut(s) | 928 |
| FblI | GTMKAC | 1 cut(s) | 270 |
| FokI | GGATG | 1 cut(s) | 1638 |
| FriOI | GRGCYC | 2 cut(s) | 258, 824 |
| FspBI | CTAG | 3 cut(s) | 419, 468, 948 |
| GlaI | GCGC | 3 cut(s) | 19, 21, 1593 |
| GsuI | CTGGAG | 1 cut(s) | 648 |
| HaeIII | GGCC | 3 cut(s) | 186, 296, 816 |
| HapII | CCGG | 5 cut(s) | 347, 374, 563, 625, 840 |
| HgaI | GACGC | 3 cut(s) | 101, 656, 753 |
| HhaI | GCGC | 3 cut(s) | 20, 22, 1594 |
| Hin1I | GRCGYC | 1 cut(s) | 93 |
| Hin1II | CATG | 9 cut(s) | 13, 244, 1145, 1187, 1262, 1271, 1399, 1565, 1591 |
| Hin6I | GCGC | 3 cut(s) | 18, 20, 1592 |
| HinP1I | GCGC | 3 cut(s) | 18, 20, 1592 |
| HincII | GTYRAC | 2 cut(s) | 247, 271 |
| HindII | GTYRAC | 2 cut(s) | 247, 271 |
| HinfI | GANTC | 5 cut(s) | 616, 679, 1309, 1606, 1648 |
| HpaII | CCGG | 5 cut(s) | 347, 374, 563, 625, 840 |
| HphI | GGTGA | 4 cut(s) | 151, 361, 746, 1214 |
| Hpy166II | GTNNAC | 5 cut(s) | 247, 271, 322, 1349, 1568 |
| Hpy188I | TCNGA | 2 cut(s) | 1368, 1605 |
| Hpy188III | TCNNGA | 9 cut(s) | 170, 226, 442, 578, 605, 665, 758, 1101, 1254 |
| Hpy8I | GTNNAC | 5 cut(s) | 247, 271, 322, 1349, 1568 |
| Hpy99I | CGWCG | 5 cut(s) | 95, 185, 272, 275, 364 |
| HpyAV | CCTTC | 3 cut(s) | 8, 307, 1260 |
| HpyCH4III | ACNGT | 2 cut(s) | 657, 1353 |
| HpyF3I | CTNAG | 8 cut(s) | 227, 399, 588, 1080, 1161, 1319, 1365, 1602 |
| Hsp92I | GRCGYC | 1 cut(s) | 93 |
| Hsp92II | CATG | 9 cut(s) | 13, 244, 1145, 1187, 1262, 1271, 1399, 1565, 1591 |
| HspAI | GCGC | 3 cut(s) | 18, 20, 1592 |
| KspI | CCGCGG | 1 cut(s) | 72 |
| Kzo9I | GATC | 2 cut(s) | 842, 860 |
| LguI | GCTCTTC | 1 cut(s) | 263 |
| LmnI | GCTCC | 2 cut(s) | 485, 1514 |
| LweI | GCATC | 7 cut(s) | 342, 709, 819, 878, 1038, 1141, 1527 |
| MaeI | CTAG | 3 cut(s) | 419, 468, 948 |
| MaeIII | GTNAC | 6 cut(s) | 657, 803, 1179, 1220, 1472, 1583 |
| MalI | GATC | 2 cut(s) | 844, 862 |
| MboI | GATC | 2 cut(s) | 842, 860 |
| MboII | GAAGA | 3 cut(s) | 185, 250, 870 |
| MhlI | GDGCHC | 5 cut(s) | 258, 717, 824, 1351, 1640 |
| MlsI | TGGCCA | 1 cut(s) | 816 |
| MluCI | AATT | 8 cut(s) | 450, 600, 637, 1052, 1088, 1202, 1229, 1657 |
| MluNI | TGGCCA | 1 cut(s) | 816 |
| MmeI | TCCRAC | 1 cut(s) | 73 |
| Mox20I | TGGCCA | 1 cut(s) | 816 |
| Mph1103I | ATGCAT | 1 cut(s) | 702 |
| MscI | TGGCCA | 1 cut(s) | 816 |
| MseI | TTAA | 5 cut(s) | 636, 1290, 1356, 1506, 1662 |
| Msp20I | TGGCCA | 1 cut(s) | 816 |
| MspA1I | CMGCKG | 4 cut(s) | 71, 109, 866, 1138 |
| MspI | CCGG | 5 cut(s) | 347, 374, 563, 625, 840 |
| MspR9I | CCNGG | 6 cut(s) | 626, 840, 876, 1076, 1296, 1452 |
| Mva1269I | GAATGC | 4 cut(s) | 165, 558, 1110, 1440 |
| MvaI | CCWGG | 4 cut(s) | 876, 1076, 1296, 1452 |
| MvnI | CGCG | 3 cut(s) | 20, 71, 1432 |
| NciI | CCSGG | 2 cut(s) | 626, 840 |
| NcoI | CCATGG | 2 cut(s) | 9, 240 |
| NdeI | CATATG | 1 cut(s) | 928 |
| NdeII | GATC | 2 cut(s) | 842, 860 |
| NlaIII | CATG | 9 cut(s) | 13, 244, 1145, 1187, 1262, 1271, 1399, 1565, 1591 |
| NlaIV | GGNNCC | 2 cut(s) | 837, 1516 |
| NmeAIII | GCCGAG | 3 cut(s) | 352, 529, 529 |
| NmuCI | GTSAC | 2 cut(s) | 1220, 1472 |
| NsiI | ATGCAT | 1 cut(s) | 702 |
| NspI | RCATGY | 2 cut(s) | 1262, 1399 |
| PaeR7I | CTCGAG | 1 cut(s) | 251 |
| PaqCI | CACCTGC | 1 cut(s) | 694 |
| PauI | GCGCGC | 1 cut(s) | 18 |
| PceI | AGGCCT | 1 cut(s) | 296 |
| PciI | ACATGT | 2 cut(s) | 1258, 1395 |
| PciSI | GCTCTTC | 1 cut(s) | 263 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 177 |
| PctI | GAATGC | 4 cut(s) | 165, 558, 1110, 1440 |
| PfeI | GAWTC | 5 cut(s) | 616, 679, 1309, 1606, 1648 |
| PfoI | TCCNGGA | 1 cut(s) | 838 |
| PpuMI | RGGWCCY | 1 cut(s) | 220 |
| PscI | ACATGT | 2 cut(s) | 1258, 1395 |
| Psp124BI | GAGCTC | 1 cut(s) | 258 |
| Psp5II | RGGWCCY | 1 cut(s) | 220 |
| Psp6I | CCWGG | 4 cut(s) | 874, 1074, 1294, 1450 |
| PspEI | GGTNACC | 2 cut(s) | 657, 1220 |
| PspGI | CCWGG | 4 cut(s) | 874, 1074, 1294, 1450 |
| PspN4I | GGNNCC | 2 cut(s) | 837, 1516 |
| PspPI | GGNCC | 2 cut(s) | 130, 220 |
| PspPPI | RGGWCCY | 1 cut(s) | 220 |
| PspXI | VCTCGAGB | 1 cut(s) | 251 |
| PstNI | CAGNNNCTG | 1 cut(s) | 109 |
| PteI | GCGCGC | 1 cut(s) | 18 |
| PvuII | CAGCTG | 3 cut(s) | 109, 866, 1138 |
| RsaI | GTAC | 5 cut(s) | 99, 236, 547, 776, 952 |
| RsaNI | GTAC | 5 cut(s) | 98, 235, 546, 775, 951 |
| SacI | GAGCTC | 1 cut(s) | 258 |
| SacII | CCGCGG | 1 cut(s) | 72 |
| SalI | GTCGAC | 1 cut(s) | 269 |
| SapI | GCTCTTC | 1 cut(s) | 263 |
| SaqAI | TTAA | 5 cut(s) | 636, 1290, 1356, 1506, 1662 |
| Sau3AI | GATC | 2 cut(s) | 842, 860 |
| Sau96I | GGNCC | 2 cut(s) | 130, 220 |
| ScaI | AGTACT | 1 cut(s) | 236 |
| ScrFI | CCNGG | 6 cut(s) | 626, 840, 876, 1076, 1296, 1452 |
| SduI | GDGCHC | 5 cut(s) | 258, 717, 824, 1351, 1640 |
| SfaNI | GCATC | 7 cut(s) | 342, 709, 819, 878, 1038, 1141, 1527 |
| SfcI | CTRYAG | 1 cut(s) | 23 |
| Sfr274I | CTCGAG | 1 cut(s) | 251 |
| Sfr303I | CCGCGG | 1 cut(s) | 72 |
| SgrBI | CCGCGG | 1 cut(s) | 72 |
| SgrDI | CGTCGACG | 1 cut(s) | 269 |
| SinI | GGWCC | 2 cut(s) | 130, 220 |
| SlaI | CTCGAG | 1 cut(s) | 251 |
| SmlI | CTYRAG | 2 cut(s) | 116, 251 |
| SmoI | CTYRAG | 2 cut(s) | 116, 251 |
| Sse9I | AATT | 8 cut(s) | 450, 600, 637, 1052, 1088, 1202, 1229, 1657 |
| SseBI | AGGCCT | 1 cut(s) | 296 |
| SsiI | CCGC | 8 cut(s) | 62, 69, 71, 74, 163, 723, 1430, 1643 |
| SspMI | CTAG | 3 cut(s) | 419, 468, 948 |
| SstI | GAGCTC | 1 cut(s) | 258 |
| StuI | AGGCCT | 1 cut(s) | 296 |
| StyD4I | CCNGG | 6 cut(s) | 624, 838, 874, 1074, 1294, 1450 |
| StyI | CCWWGG | 4 cut(s) | 9, 240, 291, 941 |
| TaaI | ACNGT | 2 cut(s) | 657, 1353 |
| TaqI | TCGA | 9 cut(s) | 171, 180, 252, 270, 362, 387, 443, 526, 900 |
| TaqII | GACCGA | 1 cut(s) | 147 |
| TasI | AATT | 8 cut(s) | 450, 600, 637, 1052, 1088, 1202, 1229, 1657 |
| TatI | WGTACW | 3 cut(s) | 234, 774, 950 |
| TauI | GCSGC | 2 cut(s) | 74, 1432 |
| TfiI | GAWTC | 5 cut(s) | 616, 679, 1309, 1606, 1648 |
| Tru1I | TTAA | 5 cut(s) | 636, 1290, 1356, 1506, 1662 |
| Tru9I | TTAA | 5 cut(s) | 636, 1290, 1356, 1506, 1662 |
| TscAI | CASTG | 2 cut(s) | 1134, 1356 |
| TseFI | GTSAC | 2 cut(s) | 1220, 1472 |
| Tsp45I | GTSAC | 2 cut(s) | 1220, 1472 |
| TspDTI | ATGAA | 2 cut(s) | 977, 1322 |
| TspGWI | ACGGA | 1 cut(s) | 112 |
| TspRI | CASTG | 2 cut(s) | 1134, 1356 |
| VneI | GTGCAC | 1 cut(s) | 1347 |
| VpaK11BI | GGWCC | 2 cut(s) | 130, 220 |
| XapI | RAATTY | 1 cut(s) | 600 |
| XceI | RCATGY | 2 cut(s) | 1262, 1399 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 298, 1181 |
| XhoI | CTCGAG | 1 cut(s) | 251 |
| XmiI | GTMKAC | 1 cut(s) | 270 |
| XspI | CTAG | 3 cut(s) | 419, 468, 948 |
| ZrmI | AGTACT | 1 cut(s) | 236 |
| Zsp2I | ATGCAT | 1 cut(s) | 702 |