Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 1 - 70 | 1.6e-08 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 232 |
| AdeI | CACNNNGTG | 1 cut(s) | 67 |
| AgsI | TTSAA | 2 cut(s) | 31, 100 |
| AjnI | CCWGG | 2 cut(s) | 78, 167 |
| AluBI | AGCT | 1 cut(s) | 55 |
| AluI | AGCT | 1 cut(s) | 55 |
| Alw21I | GWGCWC | 1 cut(s) | 57 |
| AoxI | GGCC | 1 cut(s) | 76 |
| ApeKI | GCWGC | 1 cut(s) | 5 |
| AsuHPI | GGTGA | 1 cut(s) | 155 |
| BanII | GRGCYC | 1 cut(s) | 57 |
| Bbv12I | GWGCWC | 1 cut(s) | 57 |
| BccI | CCATC | 2 cut(s) | 18, 218 |
| BciT130I | CCWGG | 2 cut(s) | 80, 169 |
| BclI | TGATCA | 2 cut(s) | 69, 202 |
| BfmI | CTRYAG | 1 cut(s) | 239 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 2 cut(s) | 80, 169 |
| BmrFI | CCNGG | 2 cut(s) | 80, 169 |
| BmsI | GCATC | 1 cut(s) | 79 |
| BsaJI | CCNNGG | 1 cut(s) | 168 |
| BseBI | CCWGG | 2 cut(s) | 80, 169 |
| BseDI | CCNNGG | 1 cut(s) | 168 |
| BseRI | GAGGAG | 1 cut(s) | 164 |
| BshFI | GGCC | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 1 cut(s) | 57 |
| BsnI | GGCC | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 57 |
| Bsp143I | GATC | 3 cut(s) | 69, 174, 202 |
| BspANI | GGCC | 1 cut(s) | 78 |
| BspHI | TCATGA | 1 cut(s) | 49 |
| BssECI | CCNNGG | 1 cut(s) | 168 |
| BssMI | GATC | 3 cut(s) | 69, 174, 202 |
| Bst2UI | CCWGG | 2 cut(s) | 80, 169 |
| Bst6I | CTCTTC | 1 cut(s) | 141 |
| BstKTI | GATC | 3 cut(s) | 72, 177, 205 |
| BstMBI | GATC | 3 cut(s) | 69, 174, 202 |
| BstNI | CCWGG | 2 cut(s) | 80, 169 |
| BstSCI | CCNGG | 2 cut(s) | 78, 167 |
| BstSFI | CTRYAG | 1 cut(s) | 239 |
| BsuRI | GGCC | 1 cut(s) | 78 |
| CciI | TCATGA | 1 cut(s) | 49 |
| CviAII | CATG | 1 cut(s) | 50 |
| CviJI | RGCY | 3 cut(s) | 5, 55, 78 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 55, 78 |
| DpnI | GATC | 3 cut(s) | 71, 176, 204 |
| DpnII | GATC | 3 cut(s) | 69, 174, 202 |
| DraIII | CACNNNGTG | 1 cut(s) | 67 |
| Eam1104I | CTCTTC | 1 cut(s) | 141 |
| EarI | CTCTTC | 1 cut(s) | 141 |
| Ecl136II | GAGCTC | 1 cut(s) | 55 |
| Eco24I | GRGCYC | 1 cut(s) | 57 |
| Eco53kI | GAGCTC | 1 cut(s) | 55 |
| EcoICRI | GAGCTC | 1 cut(s) | 55 |
| EcoRII | CCWGG | 2 cut(s) | 78, 167 |
| EcoT38I | GRGCYC | 1 cut(s) | 57 |
| FaeI | CATG | 1 cut(s) | 53 |
| FaiI | YATR | 9 cut(s) | 14, 39, 51, 65, 190, 192, 201, 210, 241 |
| FatI | CATG | 1 cut(s) | 49 |
| FbaI | TGATCA | 2 cut(s) | 69, 202 |
| FblI | GTMKAC | 1 cut(s) | 232 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FriOI | GRGCYC | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| GluI | GCNGC | 1 cut(s) | 6 |
| HaeIII | GGCC | 1 cut(s) | 78 |
| Hin1II | CATG | 1 cut(s) | 53 |
| HphI | GGTGA | 1 cut(s) | 155 |
| Hpy166II | GTNNAC | 1 cut(s) | 233 |
| Hpy188III | TCNNGA | 1 cut(s) | 50 |
| Hpy8I | GTNNAC | 1 cut(s) | 233 |
| HpyAV | CCTTC | 2 cut(s) | 128, 194 |
| HpyCH4V | TGCA | 1 cut(s) | 92 |
| Hsp92II | CATG | 1 cut(s) | 53 |
| Ksp22I | TGATCA | 2 cut(s) | 69, 202 |
| Kzo9I | GATC | 3 cut(s) | 69, 174, 202 |
| LpnPI | CCDG | 4 cut(s) | 65, 92, 154, 181 |
| LweI | GCATC | 1 cut(s) | 79 |
| MaeIII | GTNAC | 1 cut(s) | 112 |
| MalI | GATC | 3 cut(s) | 71, 176, 204 |
| MboI | GATC | 3 cut(s) | 69, 174, 202 |
| MboII | GAAGA | 2 cut(s) | 158, 174 |
| MhlI | GDGCHC | 1 cut(s) | 57 |
| MnlI | CCTC | 3 cut(s) | 142, 145, 221 |
| MseI | TTAA | 2 cut(s) | 104, 126 |
| MspR9I | CCNGG | 2 cut(s) | 80, 169 |
| MvaI | CCWGG | 2 cut(s) | 80, 169 |
| NdeII | GATC | 3 cut(s) | 69, 174, 202 |
| NlaIII | CATG | 1 cut(s) | 53 |
| NmuCI | GTSAC | 1 cut(s) | 112 |
| PagI | TCATGA | 1 cut(s) | 49 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| Psp124BI | GAGCTC | 1 cut(s) | 57 |
| Psp6I | CCWGG | 2 cut(s) | 78, 167 |
| PspGI | CCWGG | 2 cut(s) | 78, 167 |
| SacI | GAGCTC | 1 cut(s) | 57 |
| SaqAI | TTAA | 2 cut(s) | 104, 126 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 3 cut(s) | 69, 174, 202 |
| ScrFI | CCNGG | 2 cut(s) | 80, 169 |
| SduI | GDGCHC | 1 cut(s) | 57 |
| SetI | ASST | 9 cut(s) | 57, 98, 125, 139, 145, 156, 186, 232, 240 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| SfcI | CTRYAG | 1 cut(s) | 239 |
| SgeI | CNNG | 9 cut(s) | 62, 91, 92, 105, 112, 143, 180, 181, 227 |
| SstI | GAGCTC | 1 cut(s) | 57 |
| StyD4I | CCNGG | 2 cut(s) | 78, 167 |
| Tru1I | TTAA | 2 cut(s) | 104, 126 |
| Tru9I | TTAA | 2 cut(s) | 104, 126 |
| TseFI | GTSAC | 1 cut(s) | 112 |
| TseI | GCWGC | 1 cut(s) | 5 |
| Tsp45I | GTSAC | 1 cut(s) | 112 |
| TspDTI | ATGAA | 3 cut(s) | 29, 33, 38 |
| XmiI | GTMKAC | 1 cut(s) | 232 |