BED zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 254 |
| AccB1I | GGYRCC | 1 cut(s) | 254 |
| AciI | CCGC | 2 cut(s) | 127, 478 |
| AfaI | GTAC | 5 cut(s) | 54, 235, 256, 289, 364 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 150 |
| AgsI | TTSAA | 1 cut(s) | 170 |
| AjnI | CCWGG | 3 cut(s) | 181, 312, 350 |
| AluBI | AGCT | 3 cut(s) | 28, 73, 347 |
| AluI | AGCT | 3 cut(s) | 28, 73, 347 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 415 |
| Asp718I | GGTACC | 1 cut(s) | 254 |
| AspS9I | GGNCC | 1 cut(s) | 422 |
| AsuC2I | CCSGG | 1 cut(s) | 296 |
| AsuHPI | GGTGA | 1 cut(s) | 154 |
| AsuII | TTCGAA | 1 cut(s) | 242 |
| AvaII | GGWCC | 1 cut(s) | 422 |
| BanI | GGYRCC | 1 cut(s) | 254 |
| BceAI | ACGGC | 2 cut(s) | 398, 420 |
| BciT130I | CCWGG | 3 cut(s) | 183, 314, 352 |
| BcnI | CCSGG | 1 cut(s) | 296 |
| BmcAI | AGTACT | 2 cut(s) | 235, 364 |
| Bme1390I | CCNGG | 4 cut(s) | 183, 296, 314, 352 |
| Bme18I | GGWCC | 1 cut(s) | 422 |
| BmgT120I | GGNCC | 1 cut(s) | 422 |
| BmiI | GGNNCC | 1 cut(s) | 256 |
| BmrFI | CCNGG | 4 cut(s) | 183, 296, 314, 352 |
| BmrI | ACTGGG | 1 cut(s) | 403 |
| BmuI | ACTGGG | 1 cut(s) | 403 |
| Bpu10I | CCTNAGC | 1 cut(s) | 282 |
| Bpu14I | TTCGAA | 1 cut(s) | 242 |
| BpuMI | CCSGG | 1 cut(s) | 296 |
| BsaBI | GATNNNNATC | 1 cut(s) | 458 |
| BsaJI | CCNNGG | 1 cut(s) | 351 |
| BsaWI | WCCGGW | 1 cut(s) | 390 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 184, 214 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 150 |
| Bse118I | RCCGGY | 1 cut(s) | 251 |
| Bse1I | ACTGG | 2 cut(s) | 241, 409 |
| Bse3DI | GCAATG | 1 cut(s) | 276 |
| Bse8I | GATNNNNATC | 1 cut(s) | 458 |
| BseBI | CCWGG | 3 cut(s) | 183, 314, 352 |
| BseDI | CCNNGG | 1 cut(s) | 351 |
| BseGI | GGATG | 2 cut(s) | 115, 191 |
| BseJI | GATNNNNATC | 1 cut(s) | 458 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 150 |
| BseMI | GCAATG | 1 cut(s) | 276 |
| BseNI | ACTGG | 2 cut(s) | 241, 409 |
| BseYI | CCCAGC | 1 cut(s) | 343 |
| BshNI | GGYRCC | 1 cut(s) | 254 |
| BsiSI | CCGG | 3 cut(s) | 252, 296, 391 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 150 |
| Bsp119I | TTCGAA | 1 cut(s) | 242 |
| BspACI | CCGC | 2 cut(s) | 127, 478 |
| BspHI | TCATGA | 1 cut(s) | 439 |
| BspLI | GGNNCC | 1 cut(s) | 256 |
| BspT104I | TTCGAA | 1 cut(s) | 242 |
| BspT107I | GGYRCC | 1 cut(s) | 254 |
| BsrDI | GCAATG | 1 cut(s) | 276 |
| BsrFI | RCCGGY | 1 cut(s) | 251 |
| BsrI | ACTGG | 2 cut(s) | 241, 409 |
| BssAI | RCCGGY | 1 cut(s) | 251 |
| BssECI | CCNNGG | 1 cut(s) | 351 |
| Bst2UI | CCWGG | 3 cut(s) | 183, 314, 352 |
| Bst4CI | ACNGT | 2 cut(s) | 12, 431 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 38, 210 |
| BstBI | TTCGAA | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 2 cut(s) | 30, 206 |
| BstDEI | CTNAG | 1 cut(s) | 282 |
| BstF5I | GGATG | 2 cut(s) | 115, 191 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 38, 210 |
| BstNI | CCWGG | 3 cut(s) | 183, 314, 352 |
| BstNSI | RCATGY | 1 cut(s) | 201 |
| BstSCI | CCNGG | 4 cut(s) | 181, 294, 312, 350 |
| BtsCI | GGATG | 2 cut(s) | 115, 191 |
| BtsI | GCAGTG | 1 cut(s) | 215 |
| BtsIMutI | CAGTG | 1 cut(s) | 215 |
| Cac8I | GCNNGC | 2 cut(s) | 30, 206 |
| CaiI | CAGNNNCTG | 1 cut(s) | 415 |
| CciI | TCATGA | 1 cut(s) | 439 |
| Cfr10I | RCCGGY | 1 cut(s) | 251 |
| Cfr13I | GGNCC | 1 cut(s) | 422 |
| Csp6I | GTAC | 5 cut(s) | 53, 234, 255, 288, 363 |
| CviAII | CATG | 4 cut(s) | 23, 198, 440, 463 |
| CviJI | RGCY | 5 cut(s) | 28, 73, 251, 261, 347 |
| CviKI_1 | RGCY | 5 cut(s) | 28, 73, 251, 261, 347 |
| CviQI | GTAC | 5 cut(s) | 53, 234, 255, 288, 363 |
| DdeI | CTNAG | 1 cut(s) | 282 |
| Eco47I | GGWCC | 1 cut(s) | 422 |
| EcoRII | CCWGG | 3 cut(s) | 181, 312, 350 |
| FaeI | CATG | 4 cut(s) | 26, 201, 443, 466 |
| FatI | CATG | 4 cut(s) | 22, 197, 439, 462 |
| FokI | GGATG | 2 cut(s) | 102, 198 |
| GsaI | CCCAGC | 1 cut(s) | 347 |
| HapII | CCGG | 3 cut(s) | 252, 296, 391 |
| Hin1II | CATG | 4 cut(s) | 26, 201, 443, 466 |
| HinfI | GANTC | 1 cut(s) | 178 |
| HpaII | CCGG | 3 cut(s) | 252, 296, 391 |
| HphI | GGTGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 425, 440 |
| Hpy99I | CGWCG | 1 cut(s) | 473 |
| HpyCH4III | ACNGT | 2 cut(s) | 12, 431 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 32, 41, 204, 213, 227, 466 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 38, 210 |
| HpyF3I | CTNAG | 1 cut(s) | 282 |
| Hsp92II | CATG | 4 cut(s) | 26, 201, 443, 466 |
| KpnI | GGTACC | 1 cut(s) | 258 |
| LmnI | GCTCC | 1 cut(s) | 154 |
| MaeIII | GTNAC | 2 cut(s) | 308, 386 |
| MlyI | GAGTC | 1 cut(s) | 187 |
| MnlI | CCTC | 5 cut(s) | 88, 103, 123, 186, 275 |
| MspI | CCGG | 3 cut(s) | 252, 296, 391 |
| MspR9I | CCNGG | 4 cut(s) | 183, 296, 314, 352 |
| MvaI | CCWGG | 3 cut(s) | 183, 314, 352 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 38, 210 |
| NciI | CCSGG | 1 cut(s) | 296 |
| NlaIII | CATG | 4 cut(s) | 26, 201, 443, 466 |
| NlaIV | GGNNCC | 1 cut(s) | 256 |
| NspI | RCATGY | 1 cut(s) | 201 |
| NspV | TTCGAA | 1 cut(s) | 242 |
| PagI | TCATGA | 1 cut(s) | 439 |
| PfoI | TCCNGGA | 1 cut(s) | 181 |
| PleI | GAGTC | 1 cut(s) | 186 |
| PpsI | GAGTC | 1 cut(s) | 186 |
| Psp6I | CCWGG | 3 cut(s) | 181, 312, 350 |
| PspFI | CCCAGC | 1 cut(s) | 343 |
| PspGI | CCWGG | 3 cut(s) | 181, 312, 350 |
| PspN4I | GGNNCC | 1 cut(s) | 256 |
| PspPI | GGNCC | 1 cut(s) | 422 |
| PstNI | CAGNNNCTG | 1 cut(s) | 415 |
| RsaI | GTAC | 5 cut(s) | 54, 235, 256, 289, 364 |
| RsaNI | GTAC | 5 cut(s) | 53, 234, 255, 288, 363 |
| Sau96I | GGNCC | 1 cut(s) | 422 |
| ScaI | AGTACT | 2 cut(s) | 235, 364 |
| SchI | GAGTC | 1 cut(s) | 187 |
| ScrFI | CCNGG | 4 cut(s) | 183, 296, 314, 352 |
| SetI | ASST | 5 cut(s) | 30, 75, 83, 267, 349 |
| SfuI | TTCGAA | 1 cut(s) | 242 |
| SinI | GGWCC | 1 cut(s) | 422 |
| SsiI | CCGC | 2 cut(s) | 127, 478 |
| StyD4I | CCNGG | 4 cut(s) | 181, 294, 312, 350 |
| TaaI | ACNGT | 2 cut(s) | 12, 431 |
| TaqI | TCGA | 1 cut(s) | 242 |
| TatI | WGTACW | 2 cut(s) | 233, 362 |
| TscAI | CASTG | 1 cut(s) | 215 |
| TspDTI | ATGAA | 1 cut(s) | 99 |
| TspGWI | ACGGA | 2 cut(s) | 107, 133 |
| TspRI | CASTG | 1 cut(s) | 215 |
| VpaK11BI | GGWCC | 1 cut(s) | 422 |
| XceI | RCATGY | 1 cut(s) | 201 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 416 |
| ZrmI | AGTACT | 2 cut(s) | 235, 364 |