Zinc finger BED domain-containing protein RICESLEEPER
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 25 - 112 | 1.6e-30 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 189 |
| AclWI | GGATC | 1 cut(s) | 89 |
| AcoI | YGGCCR | 2 cut(s) | 186, 420 |
| AcuI | CTGAAG | 1 cut(s) | 510 |
| AfaI | GTAC | 1 cut(s) | 105 |
| AgeI | ACCGGT | 1 cut(s) | 254 |
| AgsI | TTSAA | 6 cut(s) | 44, 218, 378, 410, 435, 573 |
| AluBI | AGCT | 2 cut(s) | 476, 551 |
| AluI | AGCT | 2 cut(s) | 476, 551 |
| AlwI | GGATC | 1 cut(s) | 89 |
| AoxI | GGCC | 4 cut(s) | 186, 309, 420, 557 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 107, 139 |
| AsiGI | ACCGGT | 1 cut(s) | 254 |
| AsuHPI | GGTGA | 2 cut(s) | 172, 353 |
| BalI | TGGCCA | 1 cut(s) | 422 |
| BbsI | GAAGAC | 1 cut(s) | 534 |
| BciVI | GTATCC | 1 cut(s) | 186 |
| BclI | TGATCA | 1 cut(s) | 457 |
| BfuI | GTATCC | 1 cut(s) | 186 |
| BisI | GCNGC | 1 cut(s) | 189 |
| BlsI | GCNGC | 1 cut(s) | 190 |
| BmsI | GCATC | 3 cut(s) | 21, 242, 358 |
| BpiI | GAAGAC | 1 cut(s) | 534 |
| BsaJI | CCNNGG | 2 cut(s) | 99, 228 |
| BsaWI | WCCGGW | 1 cut(s) | 254 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 60, 90 |
| Bse118I | RCCGGY | 1 cut(s) | 254 |
| Bse3DI | GCAATG | 1 cut(s) | 438 |
| BseDI | CCNNGG | 2 cut(s) | 99, 228 |
| BseGI | GGATG | 2 cut(s) | 36, 370 |
| BseMI | GCAATG | 1 cut(s) | 438 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| Bsh1285I | CGRYCG | 1 cut(s) | 228 |
| BshFI | GGCC | 4 cut(s) | 188, 311, 422, 559 |
| BshTI | ACCGGT | 1 cut(s) | 254 |
| BsiEI | CGRYCG | 1 cut(s) | 228 |
| BsiSI | CCGG | 1 cut(s) | 255 |
| BsnI | GGCC | 4 cut(s) | 188, 311, 422, 559 |
| Bsp143I | GATC | 3 cut(s) | 13, 94, 457 |
| BspACI | CCGC | 1 cut(s) | 189 |
| BspANI | GGCC | 4 cut(s) | 188, 311, 422, 559 |
| BspPI | GGATC | 1 cut(s) | 89 |
| BsrDI | GCAATG | 1 cut(s) | 438 |
| BsrFI | RCCGGY | 1 cut(s) | 254 |
| BssAI | RCCGGY | 1 cut(s) | 254 |
| BssECI | CCNNGG | 2 cut(s) | 99, 228 |
| BssMI | GATC | 3 cut(s) | 13, 94, 457 |
| BssT1I | CCWWGG | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| BstC8I | GCNNGC | 1 cut(s) | 323 |
| BstDSI | CCRYGG | 1 cut(s) | 228 |
| BstF5I | GGATG | 2 cut(s) | 36, 370 |
| BstKTI | GATC | 3 cut(s) | 16, 97, 460 |
| BstMBI | GATC | 3 cut(s) | 13, 94, 457 |
| BstMCI | CGRYCG | 1 cut(s) | 228 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 194 |
| BstNSI | RCATGY | 1 cut(s) | 325 |
| BstV2I | GAAGAC | 1 cut(s) | 534 |
| BsuI | GTATCC | 1 cut(s) | 186 |
| BsuRI | GGCC | 4 cut(s) | 188, 311, 422, 559 |
| BtgI | CCRYGG | 1 cut(s) | 228 |
| BtsCI | GGATG | 2 cut(s) | 36, 370 |
| Cac8I | GCNNGC | 1 cut(s) | 323 |
| Cfr10I | RCCGGY | 1 cut(s) | 254 |
| Csp6I | GTAC | 1 cut(s) | 104 |
| CspAI | ACCGGT | 1 cut(s) | 254 |
| CviAII | CATG | 1 cut(s) | 322 |
| CviJI | RGCY | 7 cut(s) | 188, 311, 422, 476, 511, 551, 559 |
| CviKI_1 | RGCY | 7 cut(s) | 188, 311, 422, 476, 511, 551, 559 |
| CviQI | GTAC | 1 cut(s) | 104 |
| DpnI | GATC | 3 cut(s) | 15, 96, 459 |
| DpnII | GATC | 3 cut(s) | 13, 94, 457 |
| EaeI | YGGCCR | 2 cut(s) | 186, 420 |
| Eco130I | CCWWGG | 1 cut(s) | 99 |
| Eco147I | AGGCCT | 2 cut(s) | 311, 559 |
| Eco57I | CTGAAG | 1 cut(s) | 510 |
| EcoT14I | CCWWGG | 1 cut(s) | 99 |
| EcoT22I | ATGCAT | 2 cut(s) | 36, 323 |
| ErhI | CCWWGG | 1 cut(s) | 99 |
| FaeI | CATG | 1 cut(s) | 325 |
| FaiI | YATR | 5 cut(s) | 151, 319, 323, 399, 521 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 192, 224 |
| FatI | CATG | 1 cut(s) | 321 |
| FbaI | TGATCA | 1 cut(s) | 457 |
| Fnu4HI | GCNGC | 1 cut(s) | 189 |
| FokI | GGATG | 2 cut(s) | 43, 377 |
| Fsp4HI | GCNGC | 1 cut(s) | 189 |
| GluI | GCNGC | 1 cut(s) | 189 |
| HaeIII | GGCC | 4 cut(s) | 188, 311, 422, 559 |
| HapII | CCGG | 1 cut(s) | 255 |
| Hin1II | CATG | 1 cut(s) | 325 |
| HinfI | GANTC | 3 cut(s) | 80, 122, 410 |
| HpaII | CCGG | 1 cut(s) | 255 |
| HphI | GGTGA | 2 cut(s) | 172, 353 |
| Hpy166II | GTNNAC | 2 cut(s) | 126, 527 |
| Hpy188I | TCNGA | 4 cut(s) | 238, 274, 415, 490 |
| Hpy188III | TCNNGA | 2 cut(s) | 455, 461 |
| Hpy8I | GTNNAC | 2 cut(s) | 126, 527 |
| HpyAV | CCTTC | 4 cut(s) | 151, 384, 485, 579 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4V | TGCA | 7 cut(s) | 34, 197, 212, 321, 325, 371, 536 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 194 |
| Hsp92II | CATG | 1 cut(s) | 325 |
| Ksp22I | TGATCA | 1 cut(s) | 457 |
| Kzo9I | GATC | 3 cut(s) | 13, 94, 457 |
| LmnI | GCTCC | 1 cut(s) | 481 |
| LpnPI | CCDG | 1 cut(s) | 268 |
| LweI | GCATC | 3 cut(s) | 21, 242, 358 |
| MaeIII | GTNAC | 1 cut(s) | 167 |
| MalI | GATC | 3 cut(s) | 15, 96, 459 |
| MboI | GATC | 3 cut(s) | 13, 94, 457 |
| MboII | GAAGA | 3 cut(s) | 20, 56, 534 |
| MfeI | CAATTG | 2 cut(s) | 192, 378 |
| MlsI | TGGCCA | 1 cut(s) | 422 |
| MluCI | AATT | 7 cut(s) | 18, 108, 192, 213, 328, 378, 499 |
| MluNI | TGGCCA | 1 cut(s) | 422 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MnlI | CCTC | 8 cut(s) | 67, 112, 301, 330, 355, 454, 522, 570 |
| Mox20I | TGGCCA | 1 cut(s) | 422 |
| Mph1103I | ATGCAT | 2 cut(s) | 36, 323 |
| MscI | TGGCCA | 1 cut(s) | 422 |
| MseI | TTAA | 2 cut(s) | 138, 290 |
| Msp20I | TGGCCA | 1 cut(s) | 422 |
| MspI | CCGG | 1 cut(s) | 255 |
| MunI | CAATTG | 2 cut(s) | 192, 378 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 194 |
| NdeII | GATC | 3 cut(s) | 13, 94, 457 |
| NlaIII | CATG | 1 cut(s) | 325 |
| NsiI | ATGCAT | 2 cut(s) | 36, 323 |
| NspI | RCATGY | 1 cut(s) | 325 |
| PaeI | GCATGC | 1 cut(s) | 325 |
| PceI | AGGCCT | 2 cut(s) | 311, 559 |
| PfeI | GAWTC | 2 cut(s) | 80, 410 |
| PinAI | ACCGGT | 1 cut(s) | 254 |
| PkrI | GCNGC | 1 cut(s) | 190 |
| PleI | GAGTC | 1 cut(s) | 130 |
| PpsI | GAGTC | 1 cut(s) | 130 |
| RsaI | GTAC | 1 cut(s) | 105 |
| RsaNI | GTAC | 1 cut(s) | 104 |
| SaqAI | TTAA | 2 cut(s) | 138, 290 |
| SatI | GCNGC | 1 cut(s) | 189 |
| Sau3AI | GATC | 3 cut(s) | 13, 94, 457 |
| SchI | GAGTC | 1 cut(s) | 131 |
| SfaNI | GCATC | 3 cut(s) | 21, 242, 358 |
| SgrAI | CRCCGGYG | 1 cut(s) | 254 |
| SphI | GCATGC | 1 cut(s) | 325 |
| Sse9I | AATT | 7 cut(s) | 18, 108, 192, 213, 328, 378, 499 |
| SseBI | AGGCCT | 2 cut(s) | 311, 559 |
| SsiI | CCGC | 1 cut(s) | 189 |
| SspI | AATATT | 2 cut(s) | 134, 349 |
| StuI | AGGCCT | 2 cut(s) | 311, 559 |
| StyI | CCWWGG | 1 cut(s) | 99 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TaqI | TCGA | 3 cut(s) | 224, 262, 428 |
| TasI | AATT | 7 cut(s) | 18, 108, 192, 213, 328, 378, 499 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 2 cut(s) | 80, 410 |
| Tru1I | TTAA | 2 cut(s) | 138, 290 |
| Tru9I | TTAA | 2 cut(s) | 138, 290 |
| TspDTI | ATGAA | 2 cut(s) | 39, 414 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| XceI | RCATGY | 1 cut(s) | 325 |
| Zsp2I | ATGCAT | 2 cut(s) | 36, 323 |