Zinc finger BED domain-containing protein RICESLEEPER
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 139 - 240 | 3.1e-15 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 71, 299 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 195 |
| AciI | CCGC | 2 cut(s) | 272, 985 |
| AclWI | GGATC | 5 cut(s) | 96, 587, 699, 875, 896 |
| AcsI | RAATTY | 2 cut(s) | 199, 233 |
| AdeI | CACNNNGTG | 1 cut(s) | 195 |
| AfaI | GTAC | 1 cut(s) | 439 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 114, 195, 323, 712, 911 |
| AgsI | TTSAA | 8 cut(s) | 143, 232, 296, 403, 562, 829, 911, 940 |
| AjiI | CACGTC | 1 cut(s) | 599 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 729, 761 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 775, 807 |
| AluBI | AGCT | 2 cut(s) | 245, 549 |
| AluI | AGCT | 2 cut(s) | 245, 549 |
| Alw26I | GTCTC | 2 cut(s) | 373, 473 |
| AlwI | GGATC | 5 cut(s) | 96, 587, 699, 875, 896 |
| AoxI | GGCC | 2 cut(s) | 326, 981 |
| ApoI | RAATTY | 2 cut(s) | 199, 233 |
| AspS9I | GGNCC | 2 cut(s) | 326, 982 |
| AsuHPI | GGTGA | 7 cut(s) | 100, 320, 458, 504, 761, 932, 964 |
| BanI | GGYRCC | 2 cut(s) | 71, 299 |
| BccI | CCATC | 3 cut(s) | 35, 638, 911 |
| BcoDI | GTCTC | 2 cut(s) | 373, 473 |
| BfaI | CTAG | 4 cut(s) | 155, 192, 789, 1003 |
| BmcAI | AGTACT | 1 cut(s) | 439 |
| BmgBI | CACGTC | 1 cut(s) | 599 |
| BmgT120I | GGNCC | 2 cut(s) | 326, 982 |
| BmiI | GGNNCC | 2 cut(s) | 73, 301 |
| BmsI | GCATC | 1 cut(s) | 259 |
| BpuEI | CTTGAG | 4 cut(s) | 397, 518, 629, 750 |
| BsaBI | GATNNNNATC | 1 cut(s) | 891 |
| BsaI | GGTCTC | 2 cut(s) | 373, 473 |
| BsaJI | CCNNGG | 1 cut(s) | 303 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 114, 195, 323, 712, 911 |
| Bse118I | RCCGGY | 1 cut(s) | 331 |
| Bse1I | ACTGG | 1 cut(s) | 795 |
| Bse3DI | GCAATG | 3 cut(s) | 576, 861, 987 |
| Bse8I | GATNNNNATC | 1 cut(s) | 891 |
| BseDI | CCNNGG | 1 cut(s) | 303 |
| BseGI | GGATG | 1 cut(s) | 1002 |
| BseJI | GATNNNNATC | 1 cut(s) | 891 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 114, 195, 323, 712, 911 |
| BseMI | GCAATG | 3 cut(s) | 576, 861, 987 |
| BseMII | CTCAG | 1 cut(s) | 492 |
| BseNI | ACTGG | 1 cut(s) | 795 |
| BshFI | GGCC | 2 cut(s) | 328, 983 |
| BshNI | GGYRCC | 2 cut(s) | 71, 299 |
| BsiSI | CCGG | 1 cut(s) | 332 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 114, 195, 323, 712, 911 |
| BsmAI | GTCTC | 2 cut(s) | 373, 473 |
| BsnI | GGCC | 2 cut(s) | 328, 983 |
| Bso31I | GGTCTC | 2 cut(s) | 373, 473 |
| Bsp143I | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| BspACI | CCGC | 2 cut(s) | 272, 985 |
| BspANI | GGCC | 2 cut(s) | 328, 983 |
| BspCNI | CTCAG | 1 cut(s) | 493 |
| BspLI | GGNNCC | 2 cut(s) | 73, 301 |
| BspPI | GGATC | 5 cut(s) | 96, 587, 699, 875, 896 |
| BspQI | GCTCTTC | 1 cut(s) | 844 |
| BspT107I | GGYRCC | 2 cut(s) | 71, 299 |
| BspTNI | GGTCTC | 2 cut(s) | 373, 473 |
| BsrDI | GCAATG | 3 cut(s) | 576, 861, 987 |
| BsrFI | RCCGGY | 1 cut(s) | 331 |
| BsrI | ACTGG | 1 cut(s) | 795 |
| BssAI | RCCGGY | 1 cut(s) | 331 |
| BssECI | CCNNGG | 1 cut(s) | 303 |
| BssMI | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| BssT1I | CCWWGG | 1 cut(s) | 303 |
| Bst4CI | ACNGT | 2 cut(s) | 430, 685 |
| Bst6I | CTCTTC | 1 cut(s) | 844 |
| BstC8I | GCNNGC | 1 cut(s) | 985 |
| BstDEI | CTNAG | 1 cut(s) | 501 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 710, 909 |
| BstF5I | GGATG | 1 cut(s) | 1002 |
| BstKTI | GATC | 5 cut(s) | 104, 595, 694, 870, 904 |
| BstMAI | GTCTC | 2 cut(s) | 373, 473 |
| BstMBI | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 989 |
| BstX2I | RGATCY | 3 cut(s) | 101, 691, 901 |
| BstYI | RGATCY | 3 cut(s) | 101, 691, 901 |
| BsuRI | GGCC | 2 cut(s) | 328, 983 |
| BtrI | CACGTC | 1 cut(s) | 599 |
| BtsCI | GGATG | 1 cut(s) | 1002 |
| Cac8I | GCNNGC | 1 cut(s) | 985 |
| Cfr10I | RCCGGY | 1 cut(s) | 331 |
| Cfr13I | GGNCC | 2 cut(s) | 326, 982 |
| Csp6I | GTAC | 1 cut(s) | 438 |
| CviAII | CATG | 2 cut(s) | 288, 492 |
| CviQI | GTAC | 1 cut(s) | 438 |
| DdeI | CTNAG | 1 cut(s) | 501 |
| DpnI | GATC | 5 cut(s) | 103, 594, 693, 869, 903 |
| DpnII | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| DraIII | CACNNNGTG | 1 cut(s) | 195 |
| Eam1104I | CTCTTC | 1 cut(s) | 844 |
| EarI | CTCTTC | 1 cut(s) | 844 |
| Eco130I | CCWWGG | 1 cut(s) | 303 |
| Eco31I | GGTCTC | 2 cut(s) | 373, 473 |
| Eco32I | GATATC | 3 cut(s) | 184, 786, 893 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 710, 909 |
| EcoRI | GAATTC | 1 cut(s) | 199 |
| EcoRV | GATATC | 3 cut(s) | 184, 786, 893 |
| EcoT14I | CCWWGG | 1 cut(s) | 303 |
| ErhI | CCWWGG | 1 cut(s) | 303 |
| FaeI | CATG | 2 cut(s) | 291, 495 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 680, 712 |
| FatI | CATG | 2 cut(s) | 287, 491 |
| FauI | CCCGC | 2 cut(s) | 265, 992 |
| FspBI | CTAG | 4 cut(s) | 155, 192, 789, 1003 |
| HaeIII | GGCC | 2 cut(s) | 328, 983 |
| HapII | CCGG | 1 cut(s) | 332 |
| Hin1II | CATG | 2 cut(s) | 291, 495 |
| HincII | GTYRAC | 1 cut(s) | 622 |
| HindII | GTYRAC | 1 cut(s) | 622 |
| HindIII | AAGCTT | 1 cut(s) | 243 |
| HinfI | GANTC | 2 cut(s) | 562, 634 |
| HpaII | CCGG | 1 cut(s) | 332 |
| HphI | GGTGA | 7 cut(s) | 100, 320, 458, 504, 761, 932, 964 |
| Hpy166II | GTNNAC | 2 cut(s) | 622, 874 |
| Hpy188I | TCNGA | 3 cut(s) | 24, 81, 502 |
| Hpy188III | TCNNGA | 5 cut(s) | 211, 376, 590, 638, 865 |
| Hpy8I | GTNNAC | 2 cut(s) | 622, 874 |
| HpyAV | CCTTC | 9 cut(s) | 215, 290, 317, 397, 682, 726, 829, 905, 917 |
| HpyCH4III | ACNGT | 2 cut(s) | 430, 685 |
| HpyCH4IV | ACGT | 1 cut(s) | 598 |
| HpyCH4V | TGCA | 5 cut(s) | 162, 287, 475, 520, 992 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 989 |
| HpyF3I | CTNAG | 1 cut(s) | 501 |
| HpySE526I | ACGT | 1 cut(s) | 598 |
| Hsp92II | CATG | 2 cut(s) | 291, 495 |
| Kzo9I | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| LguI | GCTCTTC | 1 cut(s) | 844 |
| LmnI | GCTCC | 2 cut(s) | 358, 838 |
| LpnPI | CCDG | 2 cut(s) | 345, 808 |
| LweI | GCATC | 1 cut(s) | 259 |
| MaeI | CTAG | 4 cut(s) | 155, 192, 789, 1003 |
| MaeII | ACGT | 1 cut(s) | 598 |
| MalI | GATC | 5 cut(s) | 103, 594, 693, 869, 903 |
| MboI | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| MboII | GAAGA | 4 cut(s) | 70, 275, 278, 861 |
| MflI | RGATCY | 3 cut(s) | 101, 691, 901 |
| MluCI | AATT | 6 cut(s) | 199, 233, 277, 362, 418, 940 |
| MmeI | TCCRAC | 1 cut(s) | 198 |
| MnlI | CCTC | 7 cut(s) | 79, 84, 115, 721, 745, 772, 942 |
| MseI | TTAA | 1 cut(s) | 129 |
| MspI | CCGG | 1 cut(s) | 332 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 989 |
| NdeII | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| NlaIII | CATG | 2 cut(s) | 291, 495 |
| NlaIV | GGNNCC | 2 cut(s) | 73, 301 |
| PciSI | GCTCTTC | 1 cut(s) | 844 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 876 |
| PfeI | GAWTC | 2 cut(s) | 562, 634 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 195 |
| PspN4I | GGNNCC | 2 cut(s) | 73, 301 |
| PspPI | GGNCC | 2 cut(s) | 326, 982 |
| PsuI | RGATCY | 3 cut(s) | 101, 691, 901 |
| RsaI | GTAC | 1 cut(s) | 439 |
| RsaNI | GTAC | 1 cut(s) | 438 |
| SapI | GCTCTTC | 1 cut(s) | 844 |
| SaqAI | TTAA | 1 cut(s) | 129 |
| Sau3AI | GATC | 5 cut(s) | 101, 592, 691, 867, 901 |
| Sau96I | GGNCC | 2 cut(s) | 326, 982 |
| ScaI | AGTACT | 1 cut(s) | 439 |
| SfaNI | GCATC | 1 cut(s) | 259 |
| SmlI | CTYRAG | 4 cut(s) | 376, 533, 608, 765 |
| SmoI | CTYRAG | 4 cut(s) | 376, 533, 608, 765 |
| Sse9I | AATT | 6 cut(s) | 199, 233, 277, 362, 418, 940 |
| SsiI | CCGC | 2 cut(s) | 272, 985 |
| SspMI | CTAG | 4 cut(s) | 155, 192, 789, 1003 |
| StyI | CCWWGG | 1 cut(s) | 303 |
| TaaI | ACNGT | 2 cut(s) | 430, 685 |
| TaiI | ACGT | 1 cut(s) | 601 |
| TasI | AATT | 6 cut(s) | 199, 233, 277, 362, 418, 940 |
| TatI | WGTACW | 1 cut(s) | 437 |
| TfiI | GAWTC | 2 cut(s) | 562, 634 |
| Tru1I | TTAA | 1 cut(s) | 129 |
| Tru9I | TTAA | 1 cut(s) | 129 |
| TspDTI | ATGAA | 8 cut(s) | 71, 405, 422, 498, 565, 668, 672, 872 |
| TspGWI | ACGGA | 1 cut(s) | 824 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 195 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 710, 909 |
| XapI | RAATTY | 2 cut(s) | 199, 233 |
| XspI | CTAG | 4 cut(s) | 155, 192, 789, 1003 |
| ZrmI | AGTACT | 1 cut(s) | 439 |