Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 160 - 203 | 6.4e-07 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 82 |
| AcuI | CTGAAG | 1 cut(s) | 339 |
| AgsI | TTSAA | 7 cut(s) | 106, 278, 337, 436, 509, 585, 601 |
| AluBI | AGCT | 3 cut(s) | 119, 281, 452 |
| AluI | AGCT | 3 cut(s) | 119, 281, 452 |
| Alw26I | GTCTC | 1 cut(s) | 290 |
| AoxI | GGCC | 1 cut(s) | 540 |
| ApeKI | GCWGC | 2 cut(s) | 128, 281 |
| ApoI | RAATTY | 1 cut(s) | 82 |
| AspS9I | GGNCC | 1 cut(s) | 383 |
| AvaII | GGWCC | 1 cut(s) | 383 |
| BbsI | GAAGAC | 1 cut(s) | 596 |
| BbvI | GCAGC | 2 cut(s) | 115, 268 |
| BccI | CCATC | 3 cut(s) | 92, 246, 397 |
| BcoDI | GTCTC | 1 cut(s) | 290 |
| BfmI | CTRYAG | 1 cut(s) | 453 |
| BisI | GCNGC | 2 cut(s) | 129, 282 |
| BlsI | GCNGC | 2 cut(s) | 130, 283 |
| Bme18I | GGWCC | 1 cut(s) | 383 |
| BmgT120I | GGNCC | 1 cut(s) | 383 |
| BmiI | GGNNCC | 1 cut(s) | 385 |
| BmsI | GCATC | 1 cut(s) | 229 |
| BpiI | GAAGAC | 1 cut(s) | 596 |
| BpmI | CTGGAG | 1 cut(s) | 424 |
| BpuEI | CTTGAG | 1 cut(s) | 272 |
| Bse1I | ACTGG | 1 cut(s) | 407 |
| BseGI | GGATG | 1 cut(s) | 103 |
| BseNI | ACTGG | 1 cut(s) | 407 |
| BseXI | GCAGC | 2 cut(s) | 115, 268 |
| BseYI | CCCAGC | 1 cut(s) | 119 |
| BsgI | GTGCAG | 1 cut(s) | 267 |
| BshFI | GGCC | 1 cut(s) | 542 |
| BslFI | GGGAC | 1 cut(s) | 57 |
| BsmAI | GTCTC | 1 cut(s) | 290 |
| BsmFI | GGGAC | 1 cut(s) | 57 |
| BsmI | GAATGC | 2 cut(s) | 415, 553 |
| BsnI | GGCC | 1 cut(s) | 542 |
| BspANI | GGCC | 1 cut(s) | 542 |
| BspLI | GGNNCC | 1 cut(s) | 385 |
| BsrI | ACTGG | 1 cut(s) | 407 |
| Bst4CI | ACNGT | 4 cut(s) | 48, 143, 301, 457 |
| BstDEI | CTNAG | 1 cut(s) | 464 |
| BstF5I | GGATG | 1 cut(s) | 103 |
| BstMAI | GTCTC | 1 cut(s) | 290 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 125, 548 |
| BstSFI | CTRYAG | 1 cut(s) | 453 |
| BstV1I | GCAGC | 2 cut(s) | 115, 268 |
| BstV2I | GAAGAC | 1 cut(s) | 596 |
| BsuRI | GGCC | 1 cut(s) | 542 |
| BtgZI | GCGATG | 1 cut(s) | 150 |
| BtsCI | GGATG | 1 cut(s) | 103 |
| Cfr13I | GGNCC | 1 cut(s) | 383 |
| CviAII | CATG | 2 cut(s) | 271, 544 |
| CviJI | RGCY | 8 cut(s) | 119, 281, 317, 380, 419, 452, 463, 542 |
| CviKI_1 | RGCY | 8 cut(s) | 119, 281, 317, 380, 419, 452, 463, 542 |
| DdeI | CTNAG | 1 cut(s) | 464 |
| DraI | TTTAAA | 1 cut(s) | 567 |
| Eco47I | GGWCC | 1 cut(s) | 383 |
| Eco57I | CTGAAG | 1 cut(s) | 339 |
| FaeI | CATG | 2 cut(s) | 274, 547 |
| FaqI | GGGAC | 1 cut(s) | 57 |
| FatI | CATG | 2 cut(s) | 270, 543 |
| Fnu4HI | GCNGC | 2 cut(s) | 129, 282 |
| FokI | GGATG | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 2 cut(s) | 129, 282 |
| GluI | GCNGC | 2 cut(s) | 129, 282 |
| GsaI | CCCAGC | 1 cut(s) | 123 |
| GsuI | CTGGAG | 1 cut(s) | 424 |
| HaeIII | GGCC | 1 cut(s) | 542 |
| Hin1II | CATG | 2 cut(s) | 274, 547 |
| Hpy188III | TCNNGA | 1 cut(s) | 433 |
| HpyAV | CCTTC | 2 cut(s) | 3, 100 |
| HpyCH4III | ACNGT | 4 cut(s) | 48, 143, 301, 457 |
| HpyCH4V | TGCA | 6 cut(s) | 68, 242, 284, 413, 523, 551 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 125, 548 |
| HpyF3I | CTNAG | 1 cut(s) | 464 |
| Hsp92II | CATG | 2 cut(s) | 274, 547 |
| LpnPI | CCDG | 3 cut(s) | 105, 366, 388 |
| Lsp1109I | GCAGC | 2 cut(s) | 115, 268 |
| LweI | GCATC | 1 cut(s) | 229 |
| MaeIII | GTNAC | 2 cut(s) | 20, 154 |
| MboII | GAAGA | 6 cut(s) | 321, 332, 335, 448, 566, 601 |
| MluCI | AATT | 1 cut(s) | 82 |
| MnlI | CCTC | 4 cut(s) | 9, 391, 399, 564 |
| MseI | TTAA | 4 cut(s) | 59, 86, 147, 566 |
| MslI | CAYNNNNRTG | 1 cut(s) | 584 |
| Mva1269I | GAATGC | 2 cut(s) | 415, 553 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 125, 548 |
| NlaIII | CATG | 2 cut(s) | 274, 547 |
| NlaIV | GGNNCC | 1 cut(s) | 385 |
| PctI | GAATGC | 2 cut(s) | 415, 553 |
| PkrI | GCNGC | 2 cut(s) | 130, 283 |
| PspFI | CCCAGC | 1 cut(s) | 119 |
| PspN4I | GGNNCC | 1 cut(s) | 385 |
| PspPI | GGNCC | 1 cut(s) | 383 |
| RseI | CAYNNNNRTG | 1 cut(s) | 584 |
| SaqAI | TTAA | 4 cut(s) | 59, 86, 147, 566 |
| SatI | GCNGC | 2 cut(s) | 129, 282 |
| Sau96I | GGNCC | 1 cut(s) | 383 |
| SetI | ASST | 4 cut(s) | 14, 121, 283, 454 |
| SfaNI | GCATC | 1 cut(s) | 229 |
| SfcI | CTRYAG | 1 cut(s) | 453 |
| SinI | GGWCC | 1 cut(s) | 383 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 584 |
| SmlI | CTYRAG | 1 cut(s) | 287 |
| SmoI | CTYRAG | 1 cut(s) | 287 |
| Sse9I | AATT | 1 cut(s) | 82 |
| SspI | AATATT | 1 cut(s) | 608 |
| TaaI | ACNGT | 4 cut(s) | 48, 143, 301, 457 |
| TaqI | TCGA | 1 cut(s) | 348 |
| TasI | AATT | 1 cut(s) | 82 |
| Tru1I | TTAA | 4 cut(s) | 59, 86, 147, 566 |
| Tru9I | TTAA | 4 cut(s) | 59, 86, 147, 566 |
| TseI | GCWGC | 2 cut(s) | 128, 281 |
| TspDTI | ATGAA | 6 cut(s) | 153, 366, 462, 560, 573, 602 |
| VpaK11BI | GGWCC | 1 cut(s) | 383 |
| XapI | RAATTY | 1 cut(s) | 82 |