protein dimerization activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 417 |
| AclWI | GGATC | 2 cut(s) | 731, 744 |
| AcsI | RAATTY | 5 cut(s) | 208, 283, 379, 680, 901 |
| AcuI | CTGAAG | 1 cut(s) | 1350 |
| AfaI | GTAC | 3 cut(s) | 11, 700, 1040 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 19, 20, 953 |
| AgsI | TTSAA | 8 cut(s) | 50, 208, 430, 979, 1061, 1270, 1454, 1494 |
| AhlI | ACTAGT | 1 cut(s) | 511 |
| AluBI | AGCT | 8 cut(s) | 407, 713, 796, 842, 1166, 1178, 1324, 1328 |
| AluI | AGCT | 8 cut(s) | 407, 713, 796, 842, 1166, 1178, 1324, 1328 |
| Alw21I | GWGCWC | 1 cut(s) | 928 |
| Alw26I | GTCTC | 2 cut(s) | 292, 1333 |
| AlwI | GGATC | 2 cut(s) | 731, 744 |
| Ama87I | CYCGRG | 1 cut(s) | 919 |
| AoxI | GGCC | 1 cut(s) | 422 |
| ApeKI | GCWGC | 4 cut(s) | 665, 1321, 1480, 1499 |
| ApoI | RAATTY | 5 cut(s) | 208, 283, 379, 680, 901 |
| AspA2I | CCTAGG | 1 cut(s) | 887 |
| AspLEI | GCGC | 1 cut(s) | 69 |
| AspS9I | GGNCC | 2 cut(s) | 242, 422 |
| AsuC2I | CCSGG | 1 cut(s) | 930 |
| AsuHPI | GGTGA | 1 cut(s) | 1442 |
| AsuNHI | GCTAGC | 1 cut(s) | 1324 |
| AvaI | CYCGRG | 1 cut(s) | 919 |
| AvaII | GGWCC | 1 cut(s) | 242 |
| AvrII | CCTAGG | 1 cut(s) | 887 |
| BaeGI | GKGCMC | 1 cut(s) | 199 |
| BamHI | GGATCC | 1 cut(s) | 736 |
| Bbv12I | GWGCWC | 1 cut(s) | 928 |
| BbvI | GCAGC | 4 cut(s) | 652, 1333, 1486, 1492 |
| BccI | CCATC | 5 cut(s) | 98, 218, 253, 490, 1363 |
| BclI | TGATCA | 1 cut(s) | 790 |
| BcnI | CCSGG | 1 cut(s) | 930 |
| BcoDI | GTCTC | 2 cut(s) | 292, 1333 |
| BcuI | ACTAGT | 1 cut(s) | 511 |
| BfaI | CTAG | 5 cut(s) | 512, 741, 888, 1143, 1325 |
| BfmI | CTRYAG | 5 cut(s) | 936, 1125, 1173, 1478, 1500 |
| BisI | GCNGC | 4 cut(s) | 666, 1322, 1481, 1500 |
| BlnI | CCTAGG | 1 cut(s) | 887 |
| BlpI | GCTNAGC | 1 cut(s) | 1308 |
| BlsI | GCNGC | 4 cut(s) | 667, 1323, 1482, 1501 |
| Bme1390I | CCNGG | 1 cut(s) | 930 |
| Bme18I | GGWCC | 1 cut(s) | 242 |
| BmeT110I | CYCGRG | 1 cut(s) | 919 |
| BmgT120I | GGNCC | 2 cut(s) | 242, 422 |
| BmiI | GGNNCC | 1 cut(s) | 738 |
| BmrFI | CCNGG | 1 cut(s) | 930 |
| BmsI | GCATC | 3 cut(s) | 548, 646, 1287 |
| BmtI | GCTAGC | 1 cut(s) | 1328 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1308 |
| BpuEI | CTTGAG | 2 cut(s) | 176, 1255 |
| BpuMI | CCSGG | 1 cut(s) | 930 |
| Bsa29I | ATCGAT | 1 cut(s) | 530 |
| BsaAI | YACGTR | 1 cut(s) | 233 |
| BsaBI | GATNNNNATC | 2 cut(s) | 608, 1074 |
| BsaJI | CCNNGG | 1 cut(s) | 887 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1194, 1224 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 19, 20, 953 |
| Bse3DI | GCAATG | 2 cut(s) | 675, 941 |
| Bse8I | GATNNNNATC | 2 cut(s) | 608, 1074 |
| BseCI | ATCGAT | 1 cut(s) | 530 |
| BseDI | CCNNGG | 1 cut(s) | 887 |
| BseGI | GGATG | 4 cut(s) | 539, 661, 1302, 1374 |
| BseJI | GATNNNNATC | 2 cut(s) | 608, 1074 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 19, 20, 953 |
| BseMI | GCAATG | 2 cut(s) | 675, 941 |
| BseMII | CTCAG | 2 cut(s) | 1209, 1322 |
| BseSI | GKGCMC | 1 cut(s) | 199 |
| BseXI | GCAGC | 4 cut(s) | 652, 1333, 1486, 1492 |
| BsgI | GTGCAG | 1 cut(s) | 1218 |
| BshFI | GGCC | 1 cut(s) | 424 |
| BshVI | ATCGAT | 1 cut(s) | 530 |
| BsiHKAI | GWGCWC | 1 cut(s) | 928 |
| BsiHKCI | CYCGRG | 1 cut(s) | 919 |
| BsiSI | CCGG | 1 cut(s) | 929 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 19, 20, 953 |
| BsmAI | GTCTC | 2 cut(s) | 292, 1333 |
| BsmI | GAATGC | 1 cut(s) | 69 |
| BsnI | GGCC | 1 cut(s) | 424 |
| BsoBI | CYCGRG | 1 cut(s) | 919 |
| Bsp1286I | GDGCHC | 2 cut(s) | 199, 928 |
| Bsp143I | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1308 |
| BspANI | GGCC | 1 cut(s) | 424 |
| BspCNI | CTCAG | 2 cut(s) | 1210, 1321 |
| BspDI | ATCGAT | 1 cut(s) | 530 |
| BspLI | GGNNCC | 1 cut(s) | 738 |
| BspMAI | CTGCAG | 2 cut(s) | 1482, 1504 |
| BspOI | GCTAGC | 1 cut(s) | 1328 |
| BspPI | GGATC | 2 cut(s) | 731, 744 |
| BsrDI | GCAATG | 2 cut(s) | 675, 941 |
| BssECI | CCNNGG | 1 cut(s) | 887 |
| BssMI | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| BssT1I | CCWWGG | 1 cut(s) | 887 |
| Bst4CI | ACNGT | 2 cut(s) | 1174, 1437 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 665 |
| BstBAI | YACGTR | 1 cut(s) | 233 |
| BstC8I | GCNNGC | 3 cut(s) | 840, 1231, 1326 |
| BstDEI | CTNAG | 2 cut(s) | 1218, 1308 |
| BstF5I | GGATG | 4 cut(s) | 539, 661, 1302, 1374 |
| BstHHI | GCGC | 1 cut(s) | 69 |
| BstKTI | GATC | 4 cut(s) | 464, 739, 793, 1448 |
| BstMAI | GTCTC | 2 cut(s) | 292, 1333 |
| BstMBI | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 626, 665, 1318 |
| BstNSI | RCATGY | 1 cut(s) | 132 |
| BstSCI | CCNGG | 1 cut(s) | 928 |
| BstSFI | CTRYAG | 5 cut(s) | 936, 1125, 1173, 1478, 1500 |
| BstSLI | GKGCMC | 1 cut(s) | 199 |
| BstSNI | TACGTA | 1 cut(s) | 233 |
| BstV1I | GCAGC | 4 cut(s) | 652, 1333, 1486, 1492 |
| BstX2I | RGATCY | 1 cut(s) | 736 |
| BstYI | RGATCY | 1 cut(s) | 736 |
| Bsu15I | ATCGAT | 1 cut(s) | 530 |
| BsuRI | GGCC | 1 cut(s) | 424 |
| BsuTUI | ATCGAT | 1 cut(s) | 530 |
| BtgZI | GCGATG | 1 cut(s) | 202 |
| BtsCI | GGATG | 4 cut(s) | 539, 661, 1302, 1374 |
| BtsI | GCAGTG | 1 cut(s) | 168 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 3 cut(s) | 840, 1231, 1326 |
| CfoI | GCGC | 1 cut(s) | 69 |
| Cfr13I | GGNCC | 2 cut(s) | 242, 422 |
| ClaI | ATCGAT | 1 cut(s) | 530 |
| Csp6I | GTAC | 3 cut(s) | 10, 699, 1039 |
| CviAII | CATG | 8 cut(s) | 129, 182, 280, 302, 582, 781, 1138, 1460 |
| CviQI | GTAC | 3 cut(s) | 10, 699, 1039 |
| DdeI | CTNAG | 2 cut(s) | 1218, 1308 |
| DpnI | GATC | 4 cut(s) | 463, 738, 792, 1447 |
| DpnII | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| Eco105I | TACGTA | 1 cut(s) | 233 |
| Eco130I | CCWWGG | 1 cut(s) | 887 |
| Eco32I | GATATC | 1 cut(s) | 610 |
| Eco47I | GGWCC | 1 cut(s) | 242 |
| Eco57I | CTGAAG | 1 cut(s) | 1350 |
| Eco88I | CYCGRG | 1 cut(s) | 919 |
| EcoO109I | RGGNCCY | 1 cut(s) | 422 |
| EcoRI | GAATTC | 2 cut(s) | 283, 379 |
| EcoRV | GATATC | 1 cut(s) | 610 |
| EcoT14I | CCWWGG | 1 cut(s) | 887 |
| EcoT22I | ATGCAT | 2 cut(s) | 661, 782 |
| ErhI | CCWWGG | 1 cut(s) | 887 |
| FaeI | CATG | 8 cut(s) | 132, 185, 283, 305, 585, 784, 1141, 1463 |
| FatI | CATG | 8 cut(s) | 128, 181, 279, 301, 581, 780, 1137, 1459 |
| FauNDI | CATATG | 1 cut(s) | 1508 |
| FbaI | TGATCA | 1 cut(s) | 790 |
| Fnu4HI | GCNGC | 4 cut(s) | 666, 1322, 1481, 1500 |
| FokI | GGATG | 4 cut(s) | 526, 668, 1309, 1381 |
| Fsp4HI | GCNGC | 4 cut(s) | 666, 1322, 1481, 1500 |
| FspBI | CTAG | 5 cut(s) | 512, 741, 888, 1143, 1325 |
| GlaI | GCGC | 1 cut(s) | 68 |
| GluI | GCNGC | 4 cut(s) | 666, 1322, 1481, 1500 |
| HaeIII | GGCC | 1 cut(s) | 424 |
| HapII | CCGG | 1 cut(s) | 929 |
| HhaI | GCGC | 1 cut(s) | 69 |
| Hin1II | CATG | 8 cut(s) | 132, 185, 283, 305, 585, 784, 1141, 1463 |
| Hin6I | GCGC | 1 cut(s) | 67 |
| HinP1I | GCGC | 1 cut(s) | 67 |
| HpaII | CCGG | 1 cut(s) | 929 |
| HphI | GGTGA | 1 cut(s) | 1442 |
| Hpy166II | GTNNAC | 2 cut(s) | 230, 1433 |
| Hpy188I | TCNGA | 7 cut(s) | 487, 637, 877, 898, 1183, 1219, 1405 |
| Hpy188III | TCNNGA | 2 cut(s) | 459, 1416 |
| Hpy8I | GTNNAC | 2 cut(s) | 230, 1433 |
| HpyAV | CCTTC | 2 cut(s) | 667, 1382 |
| HpyCH4III | ACNGT | 2 cut(s) | 1174, 1437 |
| HpyCH4IV | ACGT | 1 cut(s) | 232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 626, 665, 1318 |
| HpyF3I | CTNAG | 2 cut(s) | 1218, 1308 |
| HpySE526I | ACGT | 1 cut(s) | 232 |
| Hsp92II | CATG | 8 cut(s) | 132, 185, 283, 305, 585, 784, 1141, 1463 |
| HspAI | GCGC | 1 cut(s) | 67 |
| Ksp22I | TGATCA | 1 cut(s) | 790 |
| Kzo9I | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| LmnI | GCTCC | 1 cut(s) | 931 |
| LpnPI | CCDG | 8 cut(s) | 546, 721, 942, 1176, 1185, 1374, 1401, 1413 |
| Lsp1109I | GCAGC | 4 cut(s) | 652, 1333, 1486, 1492 |
| LweI | GCATC | 3 cut(s) | 548, 646, 1287 |
| MaeI | CTAG | 5 cut(s) | 512, 741, 888, 1143, 1325 |
| MaeII | ACGT | 1 cut(s) | 232 |
| MaeIII | GTNAC | 3 cut(s) | 27, 364, 1437 |
| MalI | GATC | 4 cut(s) | 463, 738, 792, 1447 |
| MboI | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| MboII | GAAGA | 8 cut(s) | 62, 128, 279, 874, 903, 990, 1343, 1394 |
| MfeI | CAATTG | 1 cut(s) | 501 |
| MflI | RGATCY | 1 cut(s) | 736 |
| MhlI | GDGCHC | 2 cut(s) | 199, 928 |
| MlyI | GAGTC | 6 cut(s) | 35, 361, 1193, 1246, 1335, 1433 |
| MmeI | TCCRAC | 1 cut(s) | 742 |
| Mph1103I | ATGCAT | 2 cut(s) | 661, 782 |
| MseI | TTAA | 8 cut(s) | 410, 516, 642, 651, 747, 773, 824, 905 |
| MspI | CCGG | 1 cut(s) | 929 |
| MspR9I | CCNGG | 1 cut(s) | 930 |
| MunI | CAATTG | 1 cut(s) | 501 |
| Mva1269I | GAATGC | 1 cut(s) | 69 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 626, 665, 1318 |
| NciI | CCSGG | 1 cut(s) | 930 |
| NdeI | CATATG | 1 cut(s) | 1508 |
| NdeII | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| NheI | GCTAGC | 1 cut(s) | 1324 |
| NlaIII | CATG | 8 cut(s) | 132, 185, 283, 305, 585, 784, 1141, 1463 |
| NlaIV | GGNNCC | 1 cut(s) | 738 |
| NmuCI | GTSAC | 2 cut(s) | 27, 364 |
| NsiI | ATGCAT | 2 cut(s) | 661, 782 |
| NspI | RCATGY | 1 cut(s) | 132 |
| PaeR7I | CTCGAG | 1 cut(s) | 919 |
| PctI | GAATGC | 1 cut(s) | 69 |
| PfeI | GAWTC | 5 cut(s) | 455, 1112, 1400, 1412, 1454 |
| PkrI | GCNGC | 4 cut(s) | 667, 1323, 1482, 1501 |
| PleI | GAGTC | 6 cut(s) | 34, 361, 1192, 1245, 1335, 1432 |
| PpsI | GAGTC | 6 cut(s) | 34, 361, 1192, 1245, 1335, 1432 |
| Ppu21I | YACGTR | 1 cut(s) | 233 |
| PsiI | TTATAA | 1 cut(s) | 417 |
| PspN4I | GGNNCC | 1 cut(s) | 738 |
| PspPI | GGNCC | 2 cut(s) | 242, 422 |
| PspXI | VCTCGAGB | 1 cut(s) | 919 |
| PstI | CTGCAG | 2 cut(s) | 1482, 1504 |
| PsuI | RGATCY | 1 cut(s) | 736 |
| RsaI | GTAC | 3 cut(s) | 11, 700, 1040 |
| RsaNI | GTAC | 3 cut(s) | 10, 699, 1039 |
| SaqAI | TTAA | 8 cut(s) | 410, 516, 642, 651, 747, 773, 824, 905 |
| SatI | GCNGC | 4 cut(s) | 666, 1322, 1481, 1500 |
| Sau3AI | GATC | 4 cut(s) | 461, 736, 790, 1445 |
| Sau96I | GGNCC | 2 cut(s) | 242, 422 |
| SchI | GAGTC | 6 cut(s) | 35, 361, 1193, 1246, 1335, 1433 |
| ScrFI | CCNGG | 1 cut(s) | 930 |
| SduI | GDGCHC | 2 cut(s) | 199, 928 |
| SfaNI | GCATC | 3 cut(s) | 548, 646, 1287 |
| SfcI | CTRYAG | 5 cut(s) | 936, 1125, 1173, 1478, 1500 |
| Sfr274I | CTCGAG | 1 cut(s) | 919 |
| SinI | GGWCC | 1 cut(s) | 242 |
| SlaI | CTCGAG | 1 cut(s) | 919 |
| SmlI | CTYRAG | 3 cut(s) | 155, 919, 1234 |
| SmoI | CTYRAG | 3 cut(s) | 155, 919, 1234 |
| SnaBI | TACGTA | 1 cut(s) | 233 |
| SpeI | ACTAGT | 1 cut(s) | 511 |
| SspI | AATATT | 3 cut(s) | 84, 352, 868 |
| SspMI | CTAG | 5 cut(s) | 512, 741, 888, 1143, 1325 |
| StyD4I | CCNGG | 1 cut(s) | 928 |
| StyI | CCWWGG | 1 cut(s) | 887 |
| TaaI | ACNGT | 2 cut(s) | 1174, 1437 |
| TaiI | ACGT | 1 cut(s) | 235 |
| TaqI | TCGA | 2 cut(s) | 530, 920 |
| TatI | WGTACW | 1 cut(s) | 1038 |
| TfiI | GAWTC | 5 cut(s) | 455, 1112, 1400, 1412, 1454 |
| Tru1I | TTAA | 8 cut(s) | 410, 516, 642, 651, 747, 773, 824, 905 |
| Tru9I | TTAA | 8 cut(s) | 410, 516, 642, 651, 747, 773, 824, 905 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseFI | GTSAC | 2 cut(s) | 27, 364 |
| TseI | GCWGC | 4 cut(s) | 665, 1321, 1480, 1499 |
| Tsp45I | GTSAC | 2 cut(s) | 27, 364 |
| TspRI | CASTG | 1 cut(s) | 168 |
| VpaK11BI | GGWCC | 1 cut(s) | 242 |
| XapI | RAATTY | 5 cut(s) | 208, 283, 379, 680, 901 |
| XceI | RCATGY | 1 cut(s) | 132 |
| XhoI | CTCGAG | 1 cut(s) | 919 |
| XmaJI | CCTAGG | 1 cut(s) | 887 |
| XspI | CTAG | 5 cut(s) | 512, 741, 888, 1143, 1325 |
| Zsp2I | ATGCAT | 2 cut(s) | 661, 782 |