BED zinc finger
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1834 |
| Acc36I | ACCTGC | 1 cut(s) | 406 |
| Acc65I | GGTACC | 1 cut(s) | 1040 |
| AccB1I | GGYRCC | 3 cut(s) | 565, 589, 1040 |
| AccBSI | CCGCTC | 1 cut(s) | 2410 |
| AccI | GTMKAC | 1 cut(s) | 473 |
| AccII | CGCG | 1 cut(s) | 1741 |
| AciI | CCGC | 6 cut(s) | 913, 1519, 2264, 2408, 2426, 2441 |
| AclI | AACGTT | 1 cut(s) | 2342 |
| AclWI | GGATC | 9 cut(s) | 1202, 1988, 2001, 2174, 2187, 2270, 2283, 2742, 2815 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 4 cut(s) | 1666, 2142, 2367, 2597 |
| AdeI | CACNNNGTG | 1 cut(s) | 1645 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 936, 1270, 1435, 2020, 2254, 2835 |
| AflII | CTTAAG | 1 cut(s) | 1862 |
| AflIII | ACRYGT | 2 cut(s) | 1420, 1440 |
| AgeI | ACCGGT | 1 cut(s) | 283 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2671 |
| AjiI | CACGTC | 1 cut(s) | 1421 |
| AjnI | CCWGG | 6 cut(s) | 967, 1098, 1136, 1282, 1414, 2247 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2267, 2299 |
| Alw21I | GWGCWC | 2 cut(s) | 816, 2379 |
| Alw26I | GTCTC | 4 cut(s) | 2036, 2519, 2756, 2824 |
| AlwI | GGATC | 9 cut(s) | 1202, 1988, 2001, 2174, 2187, 2270, 2283, 2742, 2815 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1201, 1562 |
| AoxI | GGCC | 3 cut(s) | 3, 1673, 2658 |
| ApeKI | GCWGC | 3 cut(s) | 1522, 1655, 1949 |
| ApoI | RAATTY | 4 cut(s) | 1666, 2142, 2367, 2597 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2386, 2418 |
| AsiGI | ACCGGT | 1 cut(s) | 283 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1872 |
| Asp718I | GGTACC | 1 cut(s) | 1040 |
| AspA2I | CCTAGG | 1 cut(s) | 2279 |
| AspLEI | GCGC | 1 cut(s) | 1741 |
| AspS9I | GGNCC | 2 cut(s) | 1801, 2659 |
| AsuC2I | CCSGG | 2 cut(s) | 1082, 1805 |
| AsuII | TTCGAA | 1 cut(s) | 1028 |
| AvaII | GGWCC | 1 cut(s) | 1801 |
| AvrII | CCTAGG | 1 cut(s) | 2279 |
| BaeGI | GKGCMC | 1 cut(s) | 1488 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2817, 2850 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 3 cut(s) | 1993, 2179, 2275 |
| BanI | GGYRCC | 3 cut(s) | 565, 589, 1040 |
| BanII | GRGCYC | 2 cut(s) | 816, 2379 |
| BauI | CACGAG | 1 cut(s) | 2160 |
| BbsI | GAAGAC | 1 cut(s) | 1832 |
| Bbv12I | GWGCWC | 2 cut(s) | 816, 2379 |
| BbvI | GCAGC | 3 cut(s) | 1509, 1667, 1936 |
| BccI | CCATC | 7 cut(s) | 1531, 1634, 1694, 2357, 2650, 2725, 2833 |
| BceAI | ACGGC | 3 cut(s) | 537, 1184, 1206 |
| BciT130I | CCWGG | 6 cut(s) | 969, 1100, 1138, 1284, 1416, 2249 |
| BciVI | GTATCC | 1 cut(s) | 1978 |
| BclI | TGATCA | 2 cut(s) | 1636, 2557 |
| BcnI | CCSGG | 2 cut(s) | 1082, 1805 |
| BcoDI | GTCTC | 4 cut(s) | 2036, 2519, 2756, 2824 |
| BfaI | CTAG | 5 cut(s) | 2103, 2280, 2454, 2532, 2586 |
| BfmI | CTRYAG | 9 cut(s) | 57, 222, 294, 318, 342, 366, 2112, 2484, 2688 |
| BfrI | CTTAAG | 1 cut(s) | 1862 |
| BfuAI | ACCTGC | 1 cut(s) | 406 |
| BfuI | GTATCC | 1 cut(s) | 1978 |
| BglII | AGATCT | 1 cut(s) | 2152 |
| BisI | GCNGC | 5 cut(s) | 1520, 1523, 1656, 1950, 2408 |
| BlnI | CCTAGG | 1 cut(s) | 2279 |
| BlpI | GCTNAGC | 1 cut(s) | 1568 |
| BlsI | GCNGC | 5 cut(s) | 1521, 1524, 1657, 1951, 2409 |
| BmcAI | AGTACT | 5 cut(s) | 619, 1021, 1150, 2231, 2564 |
| Bme1390I | CCNGG | 8 cut(s) | 969, 1082, 1100, 1138, 1284, 1416, 1805, 2249 |
| Bme18I | GGWCC | 1 cut(s) | 1801 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2671 |
| BmgBI | CACGTC | 1 cut(s) | 1421 |
| BmgT120I | GGNCC | 2 cut(s) | 1801, 2659 |
| BmiI | GGNNCC | 9 cut(s) | 525, 567, 591, 1042, 1542, 1995, 2181, 2277, 2479 |
| BmrFI | CCNGG | 8 cut(s) | 969, 1082, 1100, 1138, 1284, 1416, 1805, 2249 |
| BmrI | ACTGGG | 4 cut(s) | 694, 1189, 1491, 1637 |
| BmsI | GCATC | 6 cut(s) | 675, 826, 1486, 2065, 2087, 2787 |
| BmuI | ACTGGG | 4 cut(s) | 694, 1189, 1491, 1637 |
| BpiI | GAAGAC | 1 cut(s) | 1832 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1885, 1917 |
| BpmI | CTGGAG | 7 cut(s) | 63, 414, 438, 1295, 1621, 1793, 2158 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1068 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1568 |
| Bpu14I | TTCGAA | 1 cut(s) | 1028 |
| BpuEI | CTTGAG | 3 cut(s) | 630, 1682, 1768 |
| BpuMI | CCSGG | 2 cut(s) | 1082, 1805 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1244 |
| BsaJI | CCNNGG | 6 cut(s) | 1137, 1283, 1348, 1434, 2279, 2470 |
| BsaWI | WCCGGW | 4 cut(s) | 175, 199, 283, 1176 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 706, 736, 970, 1000 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 936, 1270, 1435, 2020, 2254, 2835 |
| Bse118I | RCCGGY | 8 cut(s) | 211, 235, 259, 283, 307, 331, 562, 586 |
| Bse3DI | GCAATG | 1 cut(s) | 1062 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1244 |
| BseBI | CCWGG | 6 cut(s) | 969, 1100, 1138, 1284, 1416, 2249 |
| BseDI | CCNNGG | 6 cut(s) | 1137, 1283, 1348, 1434, 2279, 2470 |
| BseGI | GGATG | 6 cut(s) | 442, 901, 977, 1279, 2802, 2844 |
| BseJI | GATNNNNATC | 1 cut(s) | 1244 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 936, 1270, 1435, 2020, 2254, 2835 |
| BseMI | GCAATG | 1 cut(s) | 1062 |
| BseMII | CTCAG | 4 cut(s) | 1569, 1947, 2166, 2835 |
| BseSI | GKGCMC | 1 cut(s) | 1488 |
| BseXI | GCAGC | 3 cut(s) | 1509, 1667, 1936 |
| BseYI | CCCAGC | 2 cut(s) | 1129, 2608 |
| BsgI | GTGCAG | 1 cut(s) | 2035 |
| Bsh1236I | CGCG | 1 cut(s) | 1741 |
| BshFI | GGCC | 3 cut(s) | 5, 1675, 2660 |
| BshNI | GGYRCC | 3 cut(s) | 565, 589, 1040 |
| BshTI | ACCGGT | 1 cut(s) | 283 |
| BsiHKAI | GWGCWC | 2 cut(s) | 816, 2379 |
| BslFI | GGGAC | 3 cut(s) | 898, 1822, 1865 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 936, 1270, 1435, 2020, 2254, 2835 |
| BsmAI | GTCTC | 4 cut(s) | 2036, 2519, 2756, 2824 |
| BsmBI | CGTCTC | 1 cut(s) | 2756 |
| BsmFI | GGGAC | 3 cut(s) | 898, 1822, 1865 |
| BsnI | GGCC | 3 cut(s) | 5, 1675, 2660 |
| Bsp119I | TTCGAA | 1 cut(s) | 1028 |
| Bsp1286I | GDGCHC | 3 cut(s) | 816, 1488, 2379 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1568 |
| BspACI | CCGC | 6 cut(s) | 913, 1519, 2264, 2408, 2426, 2441 |
| BspANI | GGCC | 3 cut(s) | 5, 1675, 2660 |
| BspCNI | CTCAG | 4 cut(s) | 1568, 1948, 2167, 2834 |
| BspFNI | CGCG | 1 cut(s) | 1741 |
| BspHI | TCATGA | 4 cut(s) | 1225, 1594, 2371, 2383 |
| BspLI | GGNNCC | 9 cut(s) | 525, 567, 591, 1042, 1542, 1995, 2181, 2277, 2479 |
| BspMAI | CTGCAG | 2 cut(s) | 2116, 2488 |
| BspMI | ACCTGC | 1 cut(s) | 406 |
| BspPI | GGATC | 9 cut(s) | 1202, 1988, 2001, 2174, 2187, 2270, 2283, 2742, 2815 |
| BspT104I | TTCGAA | 1 cut(s) | 1028 |
| BspT107I | GGYRCC | 3 cut(s) | 565, 589, 1040 |
| BspTI | CTTAAG | 1 cut(s) | 1862 |
| BsrBI | CCGCTC | 1 cut(s) | 2410 |
| BsrDI | GCAATG | 1 cut(s) | 1062 |
| BsrFI | RCCGGY | 8 cut(s) | 211, 235, 259, 283, 307, 331, 562, 586 |
| BssAI | RCCGGY | 8 cut(s) | 211, 235, 259, 283, 307, 331, 562, 586 |
| BssECI | CCNNGG | 6 cut(s) | 1137, 1283, 1348, 1434, 2279, 2470 |
| BssSI | CACGAG | 1 cut(s) | 2160 |
| BssT1I | CCWWGG | 4 cut(s) | 1348, 1434, 2279, 2470 |
| Bst2BI | CACGAG | 1 cut(s) | 2160 |
| Bst2UI | CCWGG | 6 cut(s) | 969, 1100, 1138, 1284, 1416, 2249 |
| BstAFI | CTTAAG | 1 cut(s) | 1862 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 845, 996 |
| BstBI | TTCGAA | 1 cut(s) | 1028 |
| BstC8I | GCNNGC | 1 cut(s) | 992 |
| BstDEI | CTNAG | 9 cut(s) | 689, 1068, 1555, 1568, 1956, 2175, 2202, 2652, 2821 |
| BstF5I | GGATG | 6 cut(s) | 442, 901, 977, 1279, 2802, 2844 |
| BstFNI | CGCG | 1 cut(s) | 1741 |
| BstHHI | GCGC | 1 cut(s) | 1741 |
| BstMAI | GTCTC | 4 cut(s) | 2036, 2519, 2756, 2824 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 845, 996, 1519, 2407 |
| BstNI | CCWGG | 6 cut(s) | 969, 1100, 1138, 1284, 1416, 2249 |
| BstNSI | RCATGY | 3 cut(s) | 143, 987, 1444 |
| BstSCI | CCNGG | 8 cut(s) | 967, 1080, 1098, 1136, 1282, 1414, 1803, 2247 |
| BstSFI | CTRYAG | 9 cut(s) | 57, 222, 294, 318, 342, 366, 2112, 2484, 2688 |
| BstSLI | GKGCMC | 1 cut(s) | 1488 |
| BstUI | CGCG | 1 cut(s) | 1741 |
| BstV1I | GCAGC | 3 cut(s) | 1509, 1667, 1936 |
| BstV2I | GAAGAC | 1 cut(s) | 1832 |
| BstX2I | RGATCY | 4 cut(s) | 1993, 2152, 2179, 2275 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2731 |
| BstYI | RGATCY | 4 cut(s) | 1993, 2152, 2179, 2275 |
| BsuI | GTATCC | 1 cut(s) | 1978 |
| BsuRI | GGCC | 3 cut(s) | 5, 1675, 2660 |
| BtrI | CACGTC | 1 cut(s) | 1421 |
| BtsCI | GGATG | 6 cut(s) | 442, 901, 977, 1279, 2802, 2844 |
| BtsI | GCAGTG | 4 cut(s) | 1001, 2396, 2481, 2718 |
| BveI | ACCTGC | 1 cut(s) | 406 |
| Cac8I | GCNNGC | 1 cut(s) | 992 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1201, 1562 |
| CciI | TCATGA | 4 cut(s) | 1225, 1594, 2371, 2383 |
| CfoI | GCGC | 1 cut(s) | 1741 |
| Cfr10I | RCCGGY | 8 cut(s) | 211, 235, 259, 283, 307, 331, 562, 586 |
| Cfr13I | GGNCC | 2 cut(s) | 1801, 2659 |
| CspAI | ACCGGT | 1 cut(s) | 283 |
| CspCI | CAANNNNNGTGG | 5 cut(s) | 30, 352, 387, 2247, 2282 |
| DdeI | CTNAG | 9 cut(s) | 689, 1068, 1555, 1568, 1956, 2175, 2202, 2652, 2821 |
| DraIII | CACNNNGTG | 1 cut(s) | 1645 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1834 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2671 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1834 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2671 |
| Ecl136II | GAGCTC | 2 cut(s) | 814, 2377 |
| Eco130I | CCWWGG | 4 cut(s) | 1348, 1434, 2279, 2470 |
| Eco147I | AGGCCT | 1 cut(s) | 1675 |
| Eco24I | GRGCYC | 2 cut(s) | 816, 2379 |
| Eco47I | GGWCC | 1 cut(s) | 1801 |
| Eco53kI | GAGCTC | 2 cut(s) | 814, 2377 |
| EcoICRI | GAGCTC | 2 cut(s) | 814, 2377 |
| EcoRI | GAATTC | 2 cut(s) | 2142, 2367 |
| EcoRII | CCWGG | 6 cut(s) | 967, 1098, 1136, 1282, 1414, 2247 |
| EcoT14I | CCWWGG | 4 cut(s) | 1348, 1434, 2279, 2470 |
| EcoT22I | ATGCAT | 1 cut(s) | 2080 |
| EcoT38I | GRGCYC | 2 cut(s) | 816, 2379 |
| ErhI | CCWWGG | 4 cut(s) | 1348, 1434, 2279, 2470 |
| Esp3I | CGTCTC | 1 cut(s) | 2756 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1644, 1676 |
| FaqI | GGGAC | 3 cut(s) | 898, 1822, 1865 |
| FauI | CCCGC | 1 cut(s) | 2434 |
| FauNDI | CATATG | 2 cut(s) | 775, 1269 |
| FbaI | TGATCA | 2 cut(s) | 1636, 2557 |
| FblI | GTMKAC | 1 cut(s) | 473 |
| Fnu4HI | GCNGC | 5 cut(s) | 1520, 1523, 1656, 1950, 2408 |
| FokI | GGATG | 5 cut(s) | 449, 888, 984, 1266, 2809 |
| FriOI | GRGCYC | 2 cut(s) | 816, 2379 |
| Fsp4HI | GCNGC | 5 cut(s) | 1520, 1523, 1656, 1950, 2408 |
| FspBI | CTAG | 5 cut(s) | 2103, 2280, 2454, 2532, 2586 |
| GlaI | GCGC | 1 cut(s) | 1740 |
| GluI | GCNGC | 5 cut(s) | 1520, 1523, 1656, 1950, 2408 |
| GsaI | CCCAGC | 2 cut(s) | 1133, 2612 |
| GsuI | CTGGAG | 7 cut(s) | 63, 414, 438, 1295, 1621, 1793, 2158 |
| HaeIII | GGCC | 3 cut(s) | 5, 1675, 2660 |
| HhaI | GCGC | 1 cut(s) | 1741 |
| Hin6I | GCGC | 1 cut(s) | 1739 |
| HinP1I | GCGC | 1 cut(s) | 1739 |
| HincII | GTYRAC | 1 cut(s) | 763 |
| HindII | GTYRAC | 1 cut(s) | 763 |
| HindIII | AAGCTT | 1 cut(s) | 2294 |
| Hpy166II | GTNNAC | 5 cut(s) | 474, 763, 805, 1446, 2593 |
| Hpy188I | TCNGA | 8 cut(s) | 1558, 1834, 1957, 1993, 2152, 2551, 2701, 2824 |
| Hpy8I | GTNNAC | 5 cut(s) | 474, 763, 805, 1446, 2593 |
| HpyAV | CCTTC | 4 cut(s) | 647, 1601, 2131, 2426 |
| HpyCH4IV | ACGT | 3 cut(s) | 1420, 2342, 2765 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 845, 996, 1519, 2407 |
| HpyF3I | CTNAG | 9 cut(s) | 689, 1068, 1555, 1568, 1956, 2175, 2202, 2652, 2821 |
| HpySE526I | ACGT | 3 cut(s) | 1420, 2342, 2765 |
| HspAI | GCGC | 1 cut(s) | 1739 |
| KpnI | GGTACC | 1 cut(s) | 1044 |
| Ksp22I | TGATCA | 2 cut(s) | 1636, 2557 |
| LmnI | GCTCC | 5 cut(s) | 529, 940, 1858, 1893, 2341 |
| Lsp1109I | GCAGC | 3 cut(s) | 1509, 1667, 1936 |
| LweI | GCATC | 6 cut(s) | 675, 826, 1486, 2065, 2087, 2787 |
| MaeI | CTAG | 5 cut(s) | 2103, 2280, 2454, 2532, 2586 |
| MaeII | ACGT | 3 cut(s) | 1420, 2342, 2765 |
| MbiI | CCGCTC | 1 cut(s) | 2410 |
| MfeI | CAATTG | 2 cut(s) | 393, 480 |
| MflI | RGATCY | 4 cut(s) | 1993, 2152, 2179, 2275 |
| MhlI | GDGCHC | 3 cut(s) | 816, 1488, 2379 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MmeI | TCCRAC | 2 cut(s) | 2363, 2748 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 2080 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1872 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 7 cut(s) | 531, 1323, 1392, 1527, 1670, 1863, 1961 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 458, 2264 |
| MspCI | CTTAAG | 1 cut(s) | 1862 |
| MspR9I | CCNGG | 8 cut(s) | 969, 1082, 1100, 1138, 1284, 1416, 1805, 2249 |
| MunI | CAATTG | 2 cut(s) | 393, 480 |
| MvaI | CCWGG | 6 cut(s) | 969, 1100, 1138, 1284, 1416, 2249 |
| MvnI | CGCG | 1 cut(s) | 1741 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 845, 996, 1519, 2407 |
| NciI | CCSGG | 2 cut(s) | 1082, 1805 |
| NdeI | CATATG | 2 cut(s) | 775, 1269 |
| NlaIV | GGNNCC | 9 cut(s) | 525, 567, 591, 1042, 1542, 1995, 2181, 2277, 2479 |
| NsiI | ATGCAT | 1 cut(s) | 2080 |
| NspI | RCATGY | 3 cut(s) | 143, 987, 1444 |
| NspV | TTCGAA | 1 cut(s) | 1028 |
| PagI | TCATGA | 4 cut(s) | 1225, 1594, 2371, 2383 |
| PceI | AGGCCT | 1 cut(s) | 1675 |
| PciI | ACATGT | 1 cut(s) | 1440 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1872 |
| PfeI | GAWTC | 6 cut(s) | 744, 1108, 1306, 1559, 2465, 2702 |
| PfoI | TCCNGGA | 2 cut(s) | 967, 1803 |
| PinAI | ACCGGT | 1 cut(s) | 283 |
| PkrI | GCNGC | 5 cut(s) | 1521, 1524, 1657, 1951, 2409 |
| PscI | ACATGT | 1 cut(s) | 1440 |
| Psp124BI | GAGCTC | 2 cut(s) | 816, 2379 |
| Psp1406I | AACGTT | 1 cut(s) | 2342 |
| Psp6I | CCWGG | 6 cut(s) | 967, 1098, 1136, 1282, 1414, 2247 |
| PspFI | CCCAGC | 2 cut(s) | 1129, 2608 |
| PspGI | CCWGG | 6 cut(s) | 967, 1098, 1136, 1282, 1414, 2247 |
| PspN4I | GGNNCC | 9 cut(s) | 525, 567, 591, 1042, 1542, 1995, 2181, 2277, 2479 |
| PspPI | GGNCC | 2 cut(s) | 1801, 2659 |
| PstI | CTGCAG | 2 cut(s) | 2116, 2488 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1201, 1562 |
| PsuI | RGATCY | 4 cut(s) | 1993, 2152, 2179, 2275 |
| PvuII | CAGCTG | 1 cut(s) | 458 |
| SacI | GAGCTC | 2 cut(s) | 816, 2379 |
| SaqAI | TTAA | 7 cut(s) | 531, 1323, 1392, 1527, 1670, 1863, 1961 |
| SatI | GCNGC | 5 cut(s) | 1520, 1523, 1656, 1950, 2408 |
| Sau96I | GGNCC | 2 cut(s) | 1801, 2659 |
| ScaI | AGTACT | 5 cut(s) | 619, 1021, 1150, 2231, 2564 |
| ScrFI | CCNGG | 8 cut(s) | 969, 1082, 1100, 1138, 1284, 1416, 1805, 2249 |
| SduI | GDGCHC | 3 cut(s) | 816, 1488, 2379 |
| SfaNI | GCATC | 6 cut(s) | 675, 826, 1486, 2065, 2087, 2787 |
| SfcI | CTRYAG | 9 cut(s) | 57, 222, 294, 318, 342, 366, 2112, 2484, 2688 |
| SfuI | TTCGAA | 1 cut(s) | 1028 |
| SinI | GGWCC | 1 cut(s) | 1801 |
| SmlI | CTYRAG | 4 cut(s) | 645, 1661, 1747, 1862 |
| SmoI | CTYRAG | 4 cut(s) | 645, 1661, 1747, 1862 |
| SseBI | AGGCCT | 1 cut(s) | 1675 |
| SsiI | CCGC | 6 cut(s) | 913, 1519, 2264, 2408, 2426, 2441 |
| SspI | AATATT | 1 cut(s) | 2390 |
| SspMI | CTAG | 5 cut(s) | 2103, 2280, 2454, 2532, 2586 |
| SstI | GAGCTC | 2 cut(s) | 816, 2379 |
| StuI | AGGCCT | 1 cut(s) | 1675 |
| StyD4I | CCNGG | 8 cut(s) | 967, 1080, 1098, 1136, 1282, 1414, 1803, 2247 |
| StyI | CCWWGG | 4 cut(s) | 1348, 1434, 2279, 2470 |
| TaiI | ACGT | 3 cut(s) | 1423, 2345, 2768 |
| TaqI | TCGA | 3 cut(s) | 1028, 1404, 2081 |
| TatI | WGTACW | 6 cut(s) | 617, 1019, 1148, 2229, 2562, 2739 |
| TauI | GCSGC | 2 cut(s) | 1522, 2410 |
| TfiI | GAWTC | 6 cut(s) | 744, 1108, 1306, 1559, 2465, 2702 |
| Tru1I | TTAA | 7 cut(s) | 531, 1323, 1392, 1527, 1670, 1863, 1961 |
| Tru9I | TTAA | 7 cut(s) | 531, 1323, 1392, 1527, 1670, 1863, 1961 |
| TseI | GCWGC | 3 cut(s) | 1522, 1655, 1949 |
| TspGWI | ACGGA | 3 cut(s) | 893, 919, 1391 |
| Vha464I | CTTAAG | 1 cut(s) | 1862 |
| VpaK11BI | GGWCC | 1 cut(s) | 1801 |
| XapI | RAATTY | 4 cut(s) | 1666, 2142, 2367, 2597 |
| XceI | RCATGY | 3 cut(s) | 143, 987, 1444 |
| XmaJI | CCTAGG | 1 cut(s) | 2279 |
| XmiI | GTMKAC | 1 cut(s) | 473 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1872 |
| XspI | CTAG | 5 cut(s) | 2103, 2280, 2454, 2532, 2586 |
| ZrmI | AGTACT | 5 cut(s) | 619, 1021, 1150, 2231, 2564 |
| Zsp2I | ATGCAT | 1 cut(s) | 2080 |