Zinc finger BED domain-containing protein RICESLEEPER
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 306, 319 |
| AcsI | RAATTY | 1 cut(s) | 72 |
| AcuI | CTGAAG | 2 cut(s) | 126, 272 |
| AfaI | GTAC | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 95 |
| AgsI | TTSAA | 2 cut(s) | 117, 210 |
| AjnI | CCWGG | 1 cut(s) | 94 |
| AluBI | AGCT | 1 cut(s) | 203 |
| AluI | AGCT | 1 cut(s) | 203 |
| AlwI | GGATC | 2 cut(s) | 306, 319 |
| ApoI | RAATTY | 1 cut(s) | 72 |
| AspLEI | GCGC | 1 cut(s) | 26 |
| AsuHPI | GGTGA | 2 cut(s) | 110, 323 |
| BamHI | GGATCC | 1 cut(s) | 311 |
| BanII | GRGCYC | 1 cut(s) | 157 |
| BccI | CCATC | 2 cut(s) | 101, 176 |
| BciT130I | CCWGG | 1 cut(s) | 96 |
| BfaI | CTAG | 1 cut(s) | 249 |
| BfmI | CTRYAG | 2 cut(s) | 39, 60 |
| BmcAI | AGTACT | 1 cut(s) | 221 |
| Bme1390I | CCNGG | 1 cut(s) | 96 |
| BmiI | GGNNCC | 1 cut(s) | 313 |
| BmrFI | CCNGG | 1 cut(s) | 96 |
| BmsI | GCATC | 1 cut(s) | 333 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 313 |
| BsaJI | CCNNGG | 1 cut(s) | 293 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 19, 49 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 95 |
| Bse1I | ACTGG | 1 cut(s) | 89 |
| Bse3DI | GCAATG | 2 cut(s) | 262, 276 |
| BseBI | CCWGG | 1 cut(s) | 96 |
| BseDI | CCNNGG | 1 cut(s) | 293 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 95 |
| BseMI | GCAATG | 2 cut(s) | 262, 276 |
| BseNI | ACTGG | 1 cut(s) | 89 |
| BslFI | GGGAC | 1 cut(s) | 58 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 95 |
| BsmFI | GGGAC | 1 cut(s) | 58 |
| Bsp1286I | GDGCHC | 1 cut(s) | 157 |
| Bsp143I | GATC | 1 cut(s) | 311 |
| BspHI | TCATGA | 1 cut(s) | 192 |
| BspLI | GGNNCC | 1 cut(s) | 313 |
| BspMAI | CTGCAG | 1 cut(s) | 64 |
| BspPI | GGATC | 2 cut(s) | 306, 319 |
| BsrDI | GCAATG | 2 cut(s) | 262, 276 |
| BsrI | ACTGG | 1 cut(s) | 89 |
| BssECI | CCNNGG | 1 cut(s) | 293 |
| BssMI | GATC | 1 cut(s) | 311 |
| BssT1I | CCWWGG | 1 cut(s) | 293 |
| Bst2UI | CCWGG | 1 cut(s) | 96 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 222 |
| BstC8I | GCNNGC | 2 cut(s) | 201, 241 |
| BstEII | GGTNACC | 1 cut(s) | 98 |
| BstHHI | GCGC | 1 cut(s) | 26 |
| BstKTI | GATC | 1 cut(s) | 314 |
| BstMBI | GATC | 1 cut(s) | 311 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 222 |
| BstNI | CCWGG | 1 cut(s) | 96 |
| BstPI | GGTNACC | 1 cut(s) | 98 |
| BstSCI | CCNGG | 1 cut(s) | 94 |
| BstSFI | CTRYAG | 2 cut(s) | 39, 60 |
| BstX2I | RGATCY | 1 cut(s) | 311 |
| BstYI | RGATCY | 1 cut(s) | 311 |
| Cac8I | GCNNGC | 2 cut(s) | 201, 241 |
| CciI | TCATGA | 1 cut(s) | 192 |
| CfoI | GCGC | 1 cut(s) | 26 |
| Csp6I | GTAC | 1 cut(s) | 220 |
| CviAII | CATG | 1 cut(s) | 193 |
| CviJI | RGCY | 4 cut(s) | 155, 199, 203, 292 |
| CviKI_1 | RGCY | 4 cut(s) | 155, 199, 203, 292 |
| CviQI | GTAC | 1 cut(s) | 220 |
| DpnI | GATC | 1 cut(s) | 313 |
| DpnII | GATC | 1 cut(s) | 311 |
| Eco130I | CCWWGG | 1 cut(s) | 293 |
| Eco24I | GRGCYC | 1 cut(s) | 157 |
| Eco57I | CTGAAG | 2 cut(s) | 126, 272 |
| Eco91I | GGTNACC | 1 cut(s) | 98 |
| EcoO65I | GGTNACC | 1 cut(s) | 98 |
| EcoRI | GAATTC | 1 cut(s) | 72 |
| EcoRII | CCWGG | 1 cut(s) | 94 |
| EcoT14I | CCWWGG | 1 cut(s) | 293 |
| EcoT38I | GRGCYC | 1 cut(s) | 157 |
| ErhI | CCWWGG | 1 cut(s) | 293 |
| FaeI | CATG | 1 cut(s) | 196 |
| FaiI | YATR | 3 cut(s) | 11, 194, 235 |
| FaqI | GGGAC | 1 cut(s) | 58 |
| FatI | CATG | 1 cut(s) | 192 |
| FriOI | GRGCYC | 1 cut(s) | 157 |
| FspBI | CTAG | 1 cut(s) | 249 |
| GlaI | GCGC | 1 cut(s) | 25 |
| HhaI | GCGC | 1 cut(s) | 26 |
| Hin1II | CATG | 1 cut(s) | 196 |
| Hin6I | GCGC | 1 cut(s) | 24 |
| HinP1I | GCGC | 1 cut(s) | 24 |
| HinfI | GANTC | 3 cut(s) | 34, 65, 175 |
| HphI | GGTGA | 2 cut(s) | 110, 323 |
| Hpy188I | TCNGA | 2 cut(s) | 33, 321 |
| Hpy188III | TCNNGA | 4 cut(s) | 69, 127, 179, 193 |
| HpyAV | CCTTC | 2 cut(s) | 8, 296 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 62, 171, 216 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 222 |
| Hsp92II | CATG | 1 cut(s) | 196 |
| HspAI | GCGC | 1 cut(s) | 24 |
| Kzo9I | GATC | 1 cut(s) | 311 |
| LweI | GCATC | 1 cut(s) | 333 |
| MaeI | CTAG | 1 cut(s) | 249 |
| MaeIII | GTNAC | 1 cut(s) | 98 |
| MalI | GATC | 1 cut(s) | 313 |
| MboI | GATC | 1 cut(s) | 311 |
| MboII | GAAGA | 1 cut(s) | 145 |
| MflI | RGATCY | 1 cut(s) | 311 |
| MhlI | GDGCHC | 1 cut(s) | 157 |
| MluCI | AATT | 1 cut(s) | 72 |
| MlyI | GAGTC | 1 cut(s) | 28 |
| MmeI | TCCRAC | 1 cut(s) | 56 |
| MnlI | CCTC | 1 cut(s) | 123 |
| MspR9I | CCNGG | 1 cut(s) | 96 |
| MvaI | CCWGG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 222 |
| NdeII | GATC | 1 cut(s) | 311 |
| NlaIII | CATG | 1 cut(s) | 196 |
| NlaIV | GGNNCC | 1 cut(s) | 313 |
| NmuCI | GTSAC | 1 cut(s) | 98 |
| PagI | TCATGA | 1 cut(s) | 192 |
| PfeI | GAWTC | 2 cut(s) | 65, 175 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| Psp6I | CCWGG | 1 cut(s) | 94 |
| PspEI | GGTNACC | 1 cut(s) | 98 |
| PspGI | CCWGG | 1 cut(s) | 94 |
| PspN4I | GGNNCC | 1 cut(s) | 313 |
| PstI | CTGCAG | 1 cut(s) | 64 |
| PsuI | RGATCY | 1 cut(s) | 311 |
| RsaI | GTAC | 1 cut(s) | 221 |
| RsaNI | GTAC | 1 cut(s) | 220 |
| Sau3AI | GATC | 1 cut(s) | 311 |
| ScaI | AGTACT | 1 cut(s) | 221 |
| SchI | GAGTC | 1 cut(s) | 28 |
| ScrFI | CCNGG | 1 cut(s) | 96 |
| SduI | GDGCHC | 1 cut(s) | 157 |
| SetI | ASST | 2 cut(s) | 100, 205 |
| SfaNI | GCATC | 1 cut(s) | 333 |
| SfcI | CTRYAG | 2 cut(s) | 39, 60 |
| Sse9I | AATT | 1 cut(s) | 72 |
| SspMI | CTAG | 1 cut(s) | 249 |
| StyD4I | CCNGG | 1 cut(s) | 94 |
| StyI | CCWWGG | 1 cut(s) | 293 |
| TasI | AATT | 1 cut(s) | 72 |
| TatI | WGTACW | 1 cut(s) | 219 |
| TfiI | GAWTC | 2 cut(s) | 65, 175 |
| TseFI | GTSAC | 1 cut(s) | 98 |
| Tsp45I | GTSAC | 1 cut(s) | 98 |
| TspDTI | ATGAA | 2 cut(s) | 209, 287 |
| XapI | RAATTY | 1 cut(s) | 72 |
| XspI | CTAG | 1 cut(s) | 249 |
| ZrmI | AGTACT | 1 cut(s) | 221 |