Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| hAT-like_RNase-H | PF14372 | 1 - 91 | 8.5e-19 | hAT-like transposase, RNase-H fold |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 254 |
| Acc65I | GGTACC | 1 cut(s) | 444 |
| AccB1I | GGYRCC | 1 cut(s) | 444 |
| AclWI | GGATC | 4 cut(s) | 41, 146, 159, 278 |
| AfaI | GTAC | 2 cut(s) | 7, 446 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 15 |
| AgsI | TTSAA | 3 cut(s) | 306, 455, 487 |
| AluBI | AGCT | 6 cut(s) | 109, 180, 259, 293, 302, 458 |
| AluI | AGCT | 6 cut(s) | 109, 180, 259, 293, 302, 458 |
| AlwI | GGATC | 4 cut(s) | 41, 146, 159, 278 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 293 |
| Ama87I | CYCGRG | 1 cut(s) | 297 |
| AoxI | GGCC | 2 cut(s) | 243, 312 |
| ApeKI | GCWGC | 3 cut(s) | 199, 293, 458 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 86 |
| Asp718I | GGTACC | 1 cut(s) | 444 |
| AsuHPI | GGTGA | 1 cut(s) | 70 |
| AvaI | CYCGRG | 1 cut(s) | 297 |
| BamHI | GGATCC | 1 cut(s) | 151 |
| BanI | GGYRCC | 1 cut(s) | 444 |
| BbsI | GAAGAC | 1 cut(s) | 471 |
| BbvCI | CCTCAGC | 1 cut(s) | 276 |
| BbvI | GCAGC | 3 cut(s) | 211, 280, 445 |
| BccI | CCATC | 2 cut(s) | 142, 220 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 254, 288, 452, 486 |
| BglII | AGATCT | 1 cut(s) | 126 |
| BisI | GCNGC | 3 cut(s) | 200, 294, 459 |
| BlsI | GCNGC | 3 cut(s) | 201, 295, 460 |
| BmeT110I | CYCGRG | 1 cut(s) | 297 |
| BmiI | GGNNCC | 2 cut(s) | 153, 446 |
| BmsI | GCATC | 1 cut(s) | 42 |
| BpiI | GAAGAC | 1 cut(s) | 471 |
| BpmI | CTGGAG | 1 cut(s) | 131 |
| Bpu10I | CCTNAGC | 1 cut(s) | 276 |
| BsaJI | CCNNGG | 1 cut(s) | 37 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 15 |
| Bse1I | ACTGG | 1 cut(s) | 315 |
| Bse3DI | GCAATG | 1 cut(s) | 219 |
| BseDI | CCNNGG | 1 cut(s) | 37 |
| BseGI | GGATG | 2 cut(s) | 33, 238 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 15 |
| BseMI | GCAATG | 1 cut(s) | 219 |
| BseMII | CTCAG | 3 cut(s) | 167, 267, 386 |
| BseNI | ACTGG | 1 cut(s) | 315 |
| BseRI | GAGGAG | 1 cut(s) | 371 |
| BseXI | GCAGC | 3 cut(s) | 211, 280, 445 |
| BsgI | GTGCAG | 1 cut(s) | 239 |
| BshFI | GGCC | 2 cut(s) | 245, 314 |
| BshNI | GGYRCC | 1 cut(s) | 444 |
| BsiHKCI | CYCGRG | 1 cut(s) | 297 |
| BslFI | GGGAC | 1 cut(s) | 82 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 15 |
| BsmFI | GGGAC | 1 cut(s) | 82 |
| BsnI | GGCC | 2 cut(s) | 245, 314 |
| BsoBI | CYCGRG | 1 cut(s) | 297 |
| Bsp143I | GATC | 4 cut(s) | 46, 126, 151, 283 |
| BspANI | GGCC | 2 cut(s) | 245, 314 |
| BspCNI | CTCAG | 3 cut(s) | 168, 268, 385 |
| BspHI | TCATGA | 1 cut(s) | 390 |
| BspLI | GGNNCC | 2 cut(s) | 153, 446 |
| BspPI | GGATC | 4 cut(s) | 41, 146, 159, 278 |
| BspT107I | GGYRCC | 1 cut(s) | 444 |
| BsrDI | GCAATG | 1 cut(s) | 219 |
| BsrI | ACTGG | 1 cut(s) | 315 |
| BssECI | CCNNGG | 1 cut(s) | 37 |
| BssMI | GATC | 4 cut(s) | 46, 126, 151, 283 |
| BssT1I | CCWWGG | 1 cut(s) | 37 |
| BstDEI | CTNAG | 4 cut(s) | 176, 276, 347, 372 |
| BstF5I | GGATG | 2 cut(s) | 33, 238 |
| BstKTI | GATC | 4 cut(s) | 49, 129, 154, 286 |
| BstMBI | GATC | 4 cut(s) | 46, 126, 151, 283 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 299 |
| BstV1I | GCAGC | 3 cut(s) | 211, 280, 445 |
| BstV2I | GAAGAC | 1 cut(s) | 471 |
| BstX2I | RGATCY | 3 cut(s) | 46, 126, 151 |
| BstYI | RGATCY | 3 cut(s) | 46, 126, 151 |
| BsuRI | GGCC | 2 cut(s) | 245, 314 |
| BtsCI | GGATG | 2 cut(s) | 33, 238 |
| CaiI | CAGNNNCTG | 1 cut(s) | 293 |
| CciI | TCATGA | 1 cut(s) | 390 |
| Csp6I | GTAC | 2 cut(s) | 6, 445 |
| CviAII | CATG | 3 cut(s) | 118, 368, 391 |
| CviQI | GTAC | 2 cut(s) | 6, 445 |
| DdeI | CTNAG | 4 cut(s) | 176, 276, 347, 372 |
| DpnI | GATC | 4 cut(s) | 48, 128, 153, 285 |
| DpnII | GATC | 4 cut(s) | 46, 126, 151, 283 |
| Eco130I | CCWWGG | 1 cut(s) | 37 |
| Eco88I | CYCGRG | 1 cut(s) | 297 |
| EcoT14I | CCWWGG | 1 cut(s) | 37 |
| ErhI | CCWWGG | 1 cut(s) | 37 |
| FaeI | CATG | 3 cut(s) | 121, 371, 394 |
| FaiI | YATR | 8 cut(s) | 119, 172, 254, 262, 273, 320, 369, 392 |
| FaqI | GGGAC | 1 cut(s) | 82 |
| FatI | CATG | 3 cut(s) | 117, 367, 390 |
| Fnu4HI | GCNGC | 3 cut(s) | 200, 294, 459 |
| FokI | GGATG | 2 cut(s) | 20, 245 |
| Fsp4HI | GCNGC | 3 cut(s) | 200, 294, 459 |
| GluI | GCNGC | 3 cut(s) | 200, 294, 459 |
| GsuI | CTGGAG | 1 cut(s) | 131 |
| HaeIII | GGCC | 2 cut(s) | 245, 314 |
| Hin1II | CATG | 3 cut(s) | 121, 371, 394 |
| HincII | GTYRAC | 1 cut(s) | 439 |
| HindII | GTYRAC | 1 cut(s) | 439 |
| HinfI | GANTC | 1 cut(s) | 332 |
| HphI | GGTGA | 1 cut(s) | 70 |
| Hpy166II | GTNNAC | 3 cut(s) | 6, 61, 439 |
| Hpy188I | TCNGA | 3 cut(s) | 46, 177, 375 |
| Hpy188III | TCNNGA | 2 cut(s) | 287, 391 |
| Hpy8I | GTNNAC | 3 cut(s) | 6, 61, 439 |
| HpyCH4V | TGCA | 5 cut(s) | 33, 199, 220, 338, 473 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 299 |
| HpyF3I | CTNAG | 4 cut(s) | 176, 276, 347, 372 |
| Hsp92II | CATG | 3 cut(s) | 121, 371, 394 |
| KpnI | GGTACC | 1 cut(s) | 448 |
| Kzo9I | GATC | 4 cut(s) | 46, 126, 151, 283 |
| LpnPI | CCDG | 6 cut(s) | 95, 300, 328, 369, 427, 483 |
| Lsp1109I | GCAGC | 3 cut(s) | 211, 280, 445 |
| LweI | GCATC | 1 cut(s) | 42 |
| MalI | GATC | 4 cut(s) | 48, 128, 153, 285 |
| MboI | GATC | 4 cut(s) | 46, 126, 151, 283 |
| MboII | GAAGA | 4 cut(s) | 91, 94, 178, 476 |
| MfeI | CAATTG | 1 cut(s) | 306 |
| MflI | RGATCY | 3 cut(s) | 46, 126, 151 |
| MluCI | AATT | 2 cut(s) | 135, 306 |
| MroXI | GAANNNNTTC | 1 cut(s) | 86 |
| MseI | TTAA | 1 cut(s) | 398 |
| MunI | CAATTG | 1 cut(s) | 306 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 299 |
| NdeII | GATC | 4 cut(s) | 46, 126, 151, 283 |
| NlaIII | CATG | 3 cut(s) | 121, 371, 394 |
| NlaIV | GGNNCC | 2 cut(s) | 153, 446 |
| PagI | TCATGA | 1 cut(s) | 390 |
| PdmI | GAANNNNTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 1 cut(s) | 332 |
| PkrI | GCNGC | 3 cut(s) | 201, 295, 460 |
| PsiI | TTATAA | 1 cut(s) | 254 |
| PspN4I | GGNNCC | 2 cut(s) | 153, 446 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 113, 145 |
| PstNI | CAGNNNCTG | 1 cut(s) | 293 |
| PsuI | RGATCY | 3 cut(s) | 46, 126, 151 |
| RsaI | GTAC | 2 cut(s) | 7, 446 |
| RsaNI | GTAC | 2 cut(s) | 6, 445 |
| SaqAI | TTAA | 1 cut(s) | 398 |
| SatI | GCNGC | 3 cut(s) | 200, 294, 459 |
| Sau3AI | GATC | 4 cut(s) | 46, 126, 151, 283 |
| SfaNI | GCATC | 1 cut(s) | 42 |
| Sse9I | AATT | 2 cut(s) | 135, 306 |
| SspI | AATATT | 1 cut(s) | 379 |
| StyI | CCWWGG | 1 cut(s) | 37 |
| TaqI | TCGA | 1 cut(s) | 90 |
| TasI | AATT | 2 cut(s) | 135, 306 |
| TfiI | GAWTC | 1 cut(s) | 332 |
| Tru1I | TTAA | 1 cut(s) | 398 |
| Tru9I | TTAA | 1 cut(s) | 398 |
| TseI | GCWGC | 3 cut(s) | 199, 293, 458 |
| TspDTI | ATGAA | 5 cut(s) | 92, 134, 357, 379, 407 |
| XmnI | GAANNNNTTC | 1 cut(s) | 86 |