Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 35 - 118 | 1.6e-25 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 216 |
| AclWI | GGATC | 1 cut(s) | 284 |
| AcsI | RAATTY | 2 cut(s) | 14, 451 |
| AfaI | GTAC | 1 cut(s) | 116 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 454 |
| AgsI | TTSAA | 2 cut(s) | 14, 77 |
| AhlI | ACTAGT | 2 cut(s) | 331, 341 |
| AleI | CACNNNNGTG | 1 cut(s) | 169 |
| AluBI | AGCT | 4 cut(s) | 41, 188, 211, 400 |
| AluI | AGCT | 4 cut(s) | 41, 188, 211, 400 |
| AlwI | GGATC | 1 cut(s) | 284 |
| ApeKI | GCWGC | 3 cut(s) | 185, 188, 485 |
| ApoI | RAATTY | 2 cut(s) | 14, 451 |
| AspLEI | GCGC | 1 cut(s) | 217 |
| AsuHPI | GGTGA | 1 cut(s) | 190 |
| AsuNHI | GCTAGC | 1 cut(s) | 443 |
| BbvI | GCAGC | 3 cut(s) | 175, 197, 472 |
| BccI | CCATC | 1 cut(s) | 26 |
| BcuI | ACTAGT | 2 cut(s) | 331, 341 |
| BfaI | CTAG | 4 cut(s) | 332, 342, 419, 444 |
| BisI | GCNGC | 3 cut(s) | 186, 189, 486 |
| BlpI | GCTNAGC | 1 cut(s) | 360 |
| BlsI | GCNGC | 3 cut(s) | 187, 190, 487 |
| BmtI | GCTAGC | 1 cut(s) | 447 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 360 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseGI | GGATG | 1 cut(s) | 400 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseMII | CTCAG | 2 cut(s) | 33, 351 |
| BseRI | GAGGAG | 1 cut(s) | 303 |
| BseXI | GCAGC | 3 cut(s) | 175, 197, 472 |
| BsgI | GTGCAG | 1 cut(s) | 322 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BsmI | GAATGC | 2 cut(s) | 187, 265 |
| Bsp143I | GATC | 3 cut(s) | 55, 289, 415 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 360 |
| BspCNI | CTCAG | 2 cut(s) | 34, 352 |
| BspOI | GCTAGC | 1 cut(s) | 447 |
| BspPI | GGATC | 1 cut(s) | 284 |
| BssMI | GATC | 3 cut(s) | 55, 289, 415 |
| Bst4CI | ACNGT | 1 cut(s) | 247 |
| Bst6I | CTCTTC | 1 cut(s) | 475 |
| BstC8I | GCNNGC | 2 cut(s) | 213, 445 |
| BstDEI | CTNAG | 2 cut(s) | 42, 360 |
| BstF5I | GGATG | 1 cut(s) | 400 |
| BstHHI | GCGC | 1 cut(s) | 217 |
| BstKTI | GATC | 3 cut(s) | 58, 292, 418 |
| BstMBI | GATC | 3 cut(s) | 55, 289, 415 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 70 |
| BstV1I | GCAGC | 3 cut(s) | 175, 197, 472 |
| BtsCI | GGATG | 1 cut(s) | 400 |
| Cac8I | GCNNGC | 2 cut(s) | 213, 445 |
| CfoI | GCGC | 1 cut(s) | 217 |
| Csp6I | GTAC | 1 cut(s) | 115 |
| CviAII | CATG | 2 cut(s) | 61, 86 |
| CviJI | RGCY | 8 cut(s) | 41, 73, 153, 188, 211, 359, 400, 447 |
| CviKI_1 | RGCY | 8 cut(s) | 41, 73, 153, 188, 211, 359, 400, 447 |
| CviQI | GTAC | 1 cut(s) | 115 |
| DdeI | CTNAG | 2 cut(s) | 42, 360 |
| DpnI | GATC | 3 cut(s) | 57, 291, 417 |
| DpnII | GATC | 3 cut(s) | 55, 289, 415 |
| Eam1104I | CTCTTC | 1 cut(s) | 475 |
| EarI | CTCTTC | 1 cut(s) | 475 |
| Eco32I | GATATC | 1 cut(s) | 96 |
| EcoRV | GATATC | 1 cut(s) | 96 |
| FaeI | CATG | 2 cut(s) | 64, 89 |
| FaiI | YATR | 5 cut(s) | 62, 87, 132, 193, 411 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 57, 89 |
| FatI | CATG | 2 cut(s) | 60, 85 |
| Fnu4HI | GCNGC | 3 cut(s) | 186, 189, 486 |
| FokI | GGATG | 1 cut(s) | 407 |
| Fsp4HI | GCNGC | 3 cut(s) | 186, 189, 486 |
| FspBI | CTAG | 4 cut(s) | 332, 342, 419, 444 |
| FspI | TGCGCA | 1 cut(s) | 216 |
| GlaI | GCGC | 1 cut(s) | 216 |
| GluI | GCNGC | 3 cut(s) | 186, 189, 486 |
| HhaI | GCGC | 1 cut(s) | 217 |
| Hin1II | CATG | 2 cut(s) | 64, 89 |
| Hin6I | GCGC | 1 cut(s) | 215 |
| HinP1I | GCGC | 1 cut(s) | 215 |
| HincII | GTYRAC | 1 cut(s) | 109 |
| HindII | GTYRAC | 1 cut(s) | 109 |
| HindIII | AAGCTT | 1 cut(s) | 209 |
| HphI | GGTGA | 1 cut(s) | 190 |
| Hpy166II | GTNNAC | 2 cut(s) | 109, 305 |
| Hpy188I | TCNGA | 1 cut(s) | 382 |
| Hpy188III | TCNNGA | 1 cut(s) | 419 |
| Hpy8I | GTNNAC | 2 cut(s) | 109, 305 |
| HpyCH4III | ACNGT | 1 cut(s) | 247 |
| HpyCH4V | TGCA | 6 cut(s) | 64, 185, 191, 230, 339, 430 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 70 |
| HpyF3I | CTNAG | 2 cut(s) | 42, 360 |
| Hsp92II | CATG | 2 cut(s) | 64, 89 |
| HspAI | GCGC | 1 cut(s) | 215 |
| Kzo9I | GATC | 3 cut(s) | 55, 289, 415 |
| Lsp1109I | GCAGC | 3 cut(s) | 175, 197, 472 |
| MaeI | CTAG | 4 cut(s) | 332, 342, 419, 444 |
| MalI | GATC | 3 cut(s) | 57, 291, 417 |
| MboI | GATC | 3 cut(s) | 55, 289, 415 |
| MboII | GAAGA | 3 cut(s) | 41, 434, 462 |
| MluCI | AATT | 4 cut(s) | 14, 231, 370, 451 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MnlI | CCTC | 7 cut(s) | 97, 128, 168, 319, 324, 348, 452 |
| MslI | CAYNNNNRTG | 1 cut(s) | 169 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| Mva1269I | GAATGC | 2 cut(s) | 187, 265 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 70 |
| NdeII | GATC | 3 cut(s) | 55, 289, 415 |
| NheI | GCTAGC | 1 cut(s) | 443 |
| NlaIII | CATG | 2 cut(s) | 64, 89 |
| NsbI | TGCGCA | 1 cut(s) | 216 |
| OliI | CACNNNNGTG | 1 cut(s) | 169 |
| PctI | GAATGC | 2 cut(s) | 187, 265 |
| PkrI | GCNGC | 3 cut(s) | 187, 190, 487 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| RsaI | GTAC | 1 cut(s) | 116 |
| RsaNI | GTAC | 1 cut(s) | 115 |
| RseI | CAYNNNNRTG | 1 cut(s) | 169 |
| SatI | GCNGC | 3 cut(s) | 186, 189, 486 |
| Sau3AI | GATC | 3 cut(s) | 55, 289, 415 |
| SetI | ASST | 9 cut(s) | 43, 108, 120, 190, 213, 370, 402, 407, 463 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 169 |
| SpeI | ACTAGT | 2 cut(s) | 331, 341 |
| Sse9I | AATT | 4 cut(s) | 14, 231, 370, 451 |
| SspMI | CTAG | 4 cut(s) | 332, 342, 419, 444 |
| TaaI | ACNGT | 1 cut(s) | 247 |
| TasI | AATT | 4 cut(s) | 14, 231, 370, 451 |
| TseI | GCWGC | 3 cut(s) | 185, 188, 485 |
| TspDTI | ATGAA | 2 cut(s) | 96, 102 |
| XapI | RAATTY | 2 cut(s) | 14, 451 |
| XbaI | TCTAGA | 1 cut(s) | 418 |
| XspI | CTAG | 4 cut(s) | 332, 342, 419, 444 |