BED zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 69 |
| AgsI | TTSAA | 1 cut(s) | 59 |
| AjnI | CCWGG | 1 cut(s) | 150 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 68, 100 |
| AluBI | AGCT | 1 cut(s) | 256 |
| AluI | AGCT | 1 cut(s) | 256 |
| Alw21I | GWGCWC | 1 cut(s) | 258 |
| ApeKI | GCWGC | 1 cut(s) | 260 |
| ApoI | RAATTY | 1 cut(s) | 69 |
| AspS9I | GGNCC | 1 cut(s) | 268 |
| AsuHPI | GGTGA | 2 cut(s) | 170, 232 |
| AvaII | GGWCC | 1 cut(s) | 268 |
| BanII | GRGCYC | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 258 |
| BbvI | GCAGC | 1 cut(s) | 247 |
| BciT130I | CCWGG | 1 cut(s) | 152 |
| BfaI | CTAG | 1 cut(s) | 96 |
| BisI | GCNGC | 1 cut(s) | 261 |
| BlsI | GCNGC | 1 cut(s) | 262 |
| Bme1390I | CCNGG | 1 cut(s) | 152 |
| Bme18I | GGWCC | 1 cut(s) | 268 |
| BmgT120I | GGNCC | 1 cut(s) | 268 |
| BmrFI | CCNGG | 1 cut(s) | 152 |
| BsaJI | CCNNGG | 2 cut(s) | 223, 271 |
| BseBI | CCWGG | 1 cut(s) | 152 |
| BseDI | CCNNGG | 2 cut(s) | 223, 271 |
| BseGI | GGATG | 1 cut(s) | 147 |
| BseXI | GCAGC | 1 cut(s) | 247 |
| BsiHKAI | GWGCWC | 1 cut(s) | 258 |
| Bsp1286I | GDGCHC | 1 cut(s) | 258 |
| BssECI | CCNNGG | 2 cut(s) | 223, 271 |
| Bst2UI | CCWGG | 1 cut(s) | 152 |
| Bst4CI | ACNGT | 1 cut(s) | 182 |
| Bst6I | CTCTTC | 1 cut(s) | 290 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstDSI | CCRYGG | 2 cut(s) | 223, 271 |
| BstEII | GGTNACC | 1 cut(s) | 176 |
| BstF5I | GGATG | 1 cut(s) | 147 |
| BstNI | CCWGG | 1 cut(s) | 152 |
| BstPI | GGTNACC | 1 cut(s) | 176 |
| BstSCI | CCNGG | 1 cut(s) | 150 |
| BstV1I | GCAGC | 1 cut(s) | 247 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 173 |
| BtgI | CCRYGG | 2 cut(s) | 223, 271 |
| BtgZI | GCGATG | 2 cut(s) | 44, 129 |
| BtsCI | GGATG | 1 cut(s) | 147 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| Cfr13I | GGNCC | 1 cut(s) | 268 |
| CviJI | RGCY | 1 cut(s) | 256 |
| CviKI_1 | RGCY | 1 cut(s) | 256 |
| Eam1104I | CTCTTC | 1 cut(s) | 290 |
| EarI | CTCTTC | 1 cut(s) | 290 |
| Ecl136II | GAGCTC | 1 cut(s) | 256 |
| Eco24I | GRGCYC | 1 cut(s) | 258 |
| Eco32I | GATATC | 1 cut(s) | 84 |
| Eco47I | GGWCC | 1 cut(s) | 268 |
| Eco53kI | GAGCTC | 1 cut(s) | 256 |
| Eco91I | GGTNACC | 1 cut(s) | 176 |
| EcoICRI | GAGCTC | 1 cut(s) | 256 |
| EcoO65I | GGTNACC | 1 cut(s) | 176 |
| EcoRI | GAATTC | 1 cut(s) | 69 |
| EcoRII | CCWGG | 1 cut(s) | 150 |
| EcoRV | GATATC | 1 cut(s) | 84 |
| EcoT38I | GRGCYC | 1 cut(s) | 258 |
| FaiI | YATR | 1 cut(s) | 266 |
| Fnu4HI | GCNGC | 1 cut(s) | 261 |
| FokI | GGATG | 1 cut(s) | 134 |
| FriOI | GRGCYC | 1 cut(s) | 258 |
| Fsp4HI | GCNGC | 1 cut(s) | 261 |
| FspBI | CTAG | 1 cut(s) | 96 |
| GluI | GCNGC | 1 cut(s) | 261 |
| HinfI | GANTC | 3 cut(s) | 4, 119, 160 |
| HphI | GGTGA | 2 cut(s) | 170, 232 |
| Hpy188I | TCNGA | 2 cut(s) | 9, 75 |
| Hpy188III | TCNNGA | 2 cut(s) | 22, 59 |
| Hpy99I | CGWCG | 1 cut(s) | 196 |
| HpyAV | CCTTC | 1 cut(s) | 19 |
| HpyCH4III | ACNGT | 1 cut(s) | 182 |
| LmnI | GCTCC | 1 cut(s) | 253 |
| LpnPI | CCDG | 2 cut(s) | 137, 164 |
| Lsp1109I | GCAGC | 1 cut(s) | 247 |
| MaeI | CTAG | 1 cut(s) | 96 |
| MaeIII | GTNAC | 2 cut(s) | 143, 176 |
| MboII | GAAGA | 1 cut(s) | 277 |
| MhlI | GDGCHC | 1 cut(s) | 258 |
| MluCI | AATT | 1 cut(s) | 69 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 1 cut(s) | 190 |
| MnlI | CCTC | 2 cut(s) | 100, 204 |
| MseI | TTAA | 2 cut(s) | 48, 301 |
| MspR9I | CCNGG | 1 cut(s) | 152 |
| MvaI | CCWGG | 1 cut(s) | 152 |
| NmuCI | GTSAC | 2 cut(s) | 143, 176 |
| PfeI | GAWTC | 2 cut(s) | 119, 160 |
| PfoI | TCCNGGA | 1 cut(s) | 150 |
| PkrI | GCNGC | 1 cut(s) | 262 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp124BI | GAGCTC | 1 cut(s) | 258 |
| Psp6I | CCWGG | 1 cut(s) | 150 |
| PspEI | GGTNACC | 1 cut(s) | 176 |
| PspGI | CCWGG | 1 cut(s) | 150 |
| PspPI | GGNCC | 1 cut(s) | 268 |
| SacI | GAGCTC | 1 cut(s) | 258 |
| SaqAI | TTAA | 2 cut(s) | 48, 301 |
| SatI | GCNGC | 1 cut(s) | 261 |
| Sau96I | GGNCC | 1 cut(s) | 268 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 152 |
| SduI | GDGCHC | 1 cut(s) | 258 |
| SetI | ASST | 2 cut(s) | 215, 258 |
| SinI | GGWCC | 1 cut(s) | 268 |
| Sse9I | AATT | 1 cut(s) | 69 |
| SspMI | CTAG | 1 cut(s) | 96 |
| SstI | GAGCTC | 1 cut(s) | 258 |
| StyD4I | CCNGG | 1 cut(s) | 150 |
| TaaI | ACNGT | 1 cut(s) | 182 |
| TaqI | TCGA | 1 cut(s) | 194 |
| TasI | AATT | 1 cut(s) | 69 |
| TfiI | GAWTC | 2 cut(s) | 119, 160 |
| Tru1I | TTAA | 2 cut(s) | 48, 301 |
| Tru9I | TTAA | 2 cut(s) | 48, 301 |
| TseFI | GTSAC | 2 cut(s) | 143, 176 |
| TseI | GCWGC | 1 cut(s) | 260 |
| Tsp45I | GTSAC | 2 cut(s) | 143, 176 |
| TspDTI | ATGAA | 1 cut(s) | 111 |
| TspGWI | ACGGA | 1 cut(s) | 260 |
| VpaK11BI | GGWCC | 1 cut(s) | 268 |
| XapI | RAATTY | 1 cut(s) | 69 |
| XspI | CTAG | 1 cut(s) | 96 |