Zinc finger BED domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Dimer_Tnp_hAT | PF05699 | 328 - 409 | 5.2e-29 | hAT family C-terminal dimerisation region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 204 |
| AclWI | GGATC | 1 cut(s) | 281 |
| AcsI | RAATTY | 3 cut(s) | 607, 740, 870 |
| AcuI | CTGAAG | 2 cut(s) | 1254, 1302 |
| AcvI | CACGTG | 1 cut(s) | 1217 |
| AfaI | GTAC | 4 cut(s) | 221, 678, 863, 1098 |
| AflII | CTTAAG | 2 cut(s) | 470, 836 |
| AflIII | ACRYGT | 1 cut(s) | 1214 |
| AgsI | TTSAA | 7 cut(s) | 22, 46, 152, 607, 885, 1030, 1199 |
| AluBI | AGCT | 6 cut(s) | 124, 320, 406, 469, 1202, 1359 |
| AluI | AGCT | 6 cut(s) | 124, 320, 406, 469, 1202, 1359 |
| Alw21I | GWGCWC | 1 cut(s) | 1180 |
| Alw26I | GTCTC | 1 cut(s) | 264 |
| Alw44I | GTGCAC | 1 cut(s) | 1176 |
| AlwI | GGATC | 1 cut(s) | 281 |
| ApaLI | GTGCAC | 1 cut(s) | 1176 |
| ApeKI | GCWGC | 4 cut(s) | 317, 941, 1009, 1346 |
| ApoI | RAATTY | 3 cut(s) | 607, 740, 870 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 125, 157, 502, 534 |
| AseI | ATTAAT | 1 cut(s) | 51 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 156 |
| AspA2I | CCTAGG | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 704 |
| AvrII | CCTAGG | 1 cut(s) | 223 |
| BaeGI | GKGCMC | 1 cut(s) | 1180 |
| BbrPI | CACGTG | 1 cut(s) | 1217 |
| Bbv12I | GWGCWC | 1 cut(s) | 1180 |
| BbvI | GCAGC | 4 cut(s) | 329, 928, 996, 1333 |
| BccI | CCATC | 3 cut(s) | 248, 536, 683 |
| BciVI | GTATCC | 2 cut(s) | 967, 1077 |
| BcoDI | GTCTC | 1 cut(s) | 264 |
| BfaI | CTAG | 6 cut(s) | 170, 224, 279, 453, 482, 495 |
| BfmI | CTRYAG | 1 cut(s) | 1116 |
| BfrI | CTTAAG | 2 cut(s) | 470, 836 |
| BfuI | GTATCC | 2 cut(s) | 967, 1077 |
| BisI | GCNGC | 4 cut(s) | 318, 942, 1010, 1347 |
| BlnI | CCTAGG | 1 cut(s) | 223 |
| BlsI | GCNGC | 4 cut(s) | 319, 943, 1011, 1348 |
| BmsI | GCATC | 5 cut(s) | 54, 101, 191, 629, 937 |
| Bpu10I | CCTNAGC | 1 cut(s) | 426 |
| BpuEI | CTTGAG | 1 cut(s) | 14 |
| BsaAI | YACGTR | 1 cut(s) | 1217 |
| BsaBI | GATNNNNATC | 1 cut(s) | 546 |
| BsaI | GGTCTC | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 3 cut(s) | 223, 1004, 1013 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 79, 109 |
| Bse3DI | GCAATG | 1 cut(s) | 957 |
| Bse8I | GATNNNNATC | 1 cut(s) | 546 |
| BseDI | CCNNGG | 3 cut(s) | 223, 1004, 1013 |
| BseGI | GGATG | 3 cut(s) | 694, 1276, 1351 |
| BseJI | GATNNNNATC | 1 cut(s) | 546 |
| BseMI | GCAATG | 1 cut(s) | 957 |
| BseMII | CTCAG | 2 cut(s) | 992, 1119 |
| BseSI | GKGCMC | 1 cut(s) | 1180 |
| BseXI | GCAGC | 4 cut(s) | 329, 928, 996, 1333 |
| BseYI | CCCAGC | 1 cut(s) | 362 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1180 |
| BslFI | GGGAC | 1 cut(s) | 669 |
| BsmAI | GTCTC | 1 cut(s) | 264 |
| BsmFI | GGGAC | 1 cut(s) | 669 |
| BsmI | GAATGC | 1 cut(s) | 971 |
| Bso31I | GGTCTC | 1 cut(s) | 264 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1180 |
| Bsp1407I | TGTACA | 1 cut(s) | 861 |
| Bsp143I | GATC | 2 cut(s) | 36, 286 |
| BspACI | CCGC | 1 cut(s) | 204 |
| BspCNI | CTCAG | 2 cut(s) | 991, 1120 |
| BspHI | TCATGA | 1 cut(s) | 796 |
| BspPI | GGATC | 1 cut(s) | 281 |
| BspTI | CTTAAG | 2 cut(s) | 470, 836 |
| BspTNI | GGTCTC | 1 cut(s) | 264 |
| BsrDI | GCAATG | 1 cut(s) | 957 |
| BsrGI | TGTACA | 1 cut(s) | 861 |
| BssECI | CCNNGG | 3 cut(s) | 223, 1004, 1013 |
| BssMI | GATC | 2 cut(s) | 36, 286 |
| BssT1I | CCWWGG | 3 cut(s) | 223, 1004, 1013 |
| Bst4CI | ACNGT | 2 cut(s) | 1120, 1195 |
| BstAFI | CTTAAG | 2 cut(s) | 470, 836 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 89, 337, 504 |
| BstAUI | TGTACA | 1 cut(s) | 861 |
| BstBAI | YACGTR | 1 cut(s) | 1217 |
| BstC8I | GCNNGC | 2 cut(s) | 450, 786 |
| BstDEI | CTNAG | 9 cut(s) | 144, 189, 197, 414, 426, 662, 828, 978, 1128 |
| BstF5I | GGATG | 3 cut(s) | 694, 1276, 1351 |
| BstKTI | GATC | 2 cut(s) | 39, 289 |
| BstMAI | GTCTC | 1 cut(s) | 264 |
| BstMBI | GATC | 2 cut(s) | 36, 286 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 89, 121, 201, 337, 504, 560, 947 |
| BstNSI | RCATGY | 2 cut(s) | 452, 788 |
| BstSFI | CTRYAG | 1 cut(s) | 1116 |
| BstSLI | GKGCMC | 1 cut(s) | 1180 |
| BstV1I | GCAGC | 4 cut(s) | 329, 928, 996, 1333 |
| BsuI | GTATCC | 2 cut(s) | 967, 1077 |
| BtsCI | GGATG | 3 cut(s) | 694, 1276, 1351 |
| BtsI | GCAGTG | 2 cut(s) | 420, 558 |
| BtsIMutI | CAGTG | 2 cut(s) | 420, 558 |
| Cac8I | GCNNGC | 2 cut(s) | 450, 786 |
| CciI | TCATGA | 1 cut(s) | 796 |
| Csp6I | GTAC | 4 cut(s) | 220, 677, 862, 1097 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1248, 1283 |
| CviAII | CATG | 7 cut(s) | 68, 332, 449, 785, 797, 865, 970 |
| CviJI | RGCY | 9 cut(s) | 124, 188, 320, 406, 469, 1009, 1088, 1202, 1359 |
| CviKI_1 | RGCY | 9 cut(s) | 124, 188, 320, 406, 469, 1009, 1088, 1202, 1359 |
| CviQI | GTAC | 4 cut(s) | 220, 677, 862, 1097 |
| DdeI | CTNAG | 9 cut(s) | 144, 189, 197, 414, 426, 662, 828, 978, 1128 |
| DpnI | GATC | 2 cut(s) | 38, 288 |
| DpnII | GATC | 2 cut(s) | 36, 286 |
| Eco130I | CCWWGG | 3 cut(s) | 223, 1004, 1013 |
| Eco31I | GGTCTC | 1 cut(s) | 264 |
| Eco32I | GATATC | 2 cut(s) | 400, 411 |
| Eco57I | CTGAAG | 2 cut(s) | 1254, 1302 |
| Eco72I | CACGTG | 1 cut(s) | 1217 |
| EcoRV | GATATC | 2 cut(s) | 400, 411 |
| EcoT14I | CCWWGG | 3 cut(s) | 223, 1004, 1013 |
| EcoT22I | ATGCAT | 5 cut(s) | 69, 333, 450, 622, 971 |
| ErhI | CCWWGG | 3 cut(s) | 223, 1004, 1013 |
| FaeI | CATG | 7 cut(s) | 71, 335, 452, 788, 800, 868, 973 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 23, 55 |
| FaqI | GGGAC | 1 cut(s) | 669 |
| FatI | CATG | 7 cut(s) | 67, 331, 448, 784, 796, 864, 969 |
| Fnu4HI | GCNGC | 4 cut(s) | 318, 942, 1010, 1347 |
| FokI | GGATG | 3 cut(s) | 701, 1283, 1338 |
| Fsp4HI | GCNGC | 4 cut(s) | 318, 942, 1010, 1347 |
| FspBI | CTAG | 6 cut(s) | 170, 224, 279, 453, 482, 495 |
| GluI | GCNGC | 4 cut(s) | 318, 942, 1010, 1347 |
| GsaI | CCCAGC | 1 cut(s) | 366 |
| Hin1II | CATG | 7 cut(s) | 71, 335, 452, 788, 800, 868, 973 |
| HincII | GTYRAC | 1 cut(s) | 574 |
| HindII | GTYRAC | 1 cut(s) | 574 |
| HindIII | AAGCTT | 1 cut(s) | 467 |
| HinfI | GANTC | 4 cut(s) | 770, 890, 1130, 1322 |
| HphI | GGTGA | 2 cut(s) | 46, 704 |
| Hpy166II | GTNNAC | 6 cut(s) | 305, 525, 574, 722, 1134, 1178 |
| Hpy188I | TCNGA | 2 cut(s) | 517, 1129 |
| Hpy188III | TCNNGA | 8 cut(s) | 13, 170, 290, 302, 797, 1070, 1091, 1160 |
| Hpy8I | GTNNAC | 6 cut(s) | 305, 525, 574, 722, 1134, 1178 |
| HpyAV | CCTTC | 3 cut(s) | 723, 1042, 1046 |
| HpyCH4III | ACNGT | 2 cut(s) | 1120, 1195 |
| HpyCH4IV | ACGT | 1 cut(s) | 1216 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 89, 121, 201, 337, 504, 560, 947 |
| HpyF3I | CTNAG | 9 cut(s) | 144, 189, 197, 414, 426, 662, 828, 978, 1128 |
| HpySE526I | ACGT | 1 cut(s) | 1216 |
| Hsp92II | CATG | 7 cut(s) | 71, 335, 452, 788, 800, 868, 973 |
| Kzo9I | GATC | 2 cut(s) | 36, 286 |
| LpnPI | CCDG | 3 cut(s) | 303, 348, 1083 |
| Lsp1109I | GCAGC | 4 cut(s) | 329, 928, 996, 1333 |
| LweI | GCATC | 5 cut(s) | 54, 101, 191, 629, 937 |
| MaeI | CTAG | 6 cut(s) | 170, 224, 279, 453, 482, 495 |
| MaeII | ACGT | 1 cut(s) | 1216 |
| MaeIII | GTNAC | 1 cut(s) | 767 |
| MalI | GATC | 2 cut(s) | 38, 288 |
| MboI | GATC | 2 cut(s) | 36, 286 |
| MboII | GAAGA | 5 cut(s) | 129, 443, 475, 1247, 1295 |
| MfeI | CAATTG | 2 cut(s) | 986, 1309 |
| MhlI | GDGCHC | 1 cut(s) | 1180 |
| MlyI | GAGTC | 3 cut(s) | 764, 1139, 1331 |
| MnlI | CCTC | 3 cut(s) | 105, 688, 907 |
| Mph1103I | ATGCAT | 5 cut(s) | 69, 333, 450, 622, 971 |
| MroXI | GAANNNNTTC | 1 cut(s) | 156 |
| MseI | TTAA | 8 cut(s) | 51, 471, 612, 705, 764, 837, 1182, 1298 |
| MslI | CAYNNNNRTG | 2 cut(s) | 249, 1029 |
| MspCI | CTTAAG | 2 cut(s) | 470, 836 |
| MunI | CAATTG | 2 cut(s) | 986, 1309 |
| Mva1269I | GAATGC | 1 cut(s) | 971 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 89, 121, 201, 337, 504, 560, 947 |
| NdeII | GATC | 2 cut(s) | 36, 286 |
| NlaIII | CATG | 7 cut(s) | 71, 335, 452, 788, 800, 868, 973 |
| NmuCI | GTSAC | 1 cut(s) | 767 |
| NsiI | ATGCAT | 5 cut(s) | 69, 333, 450, 622, 971 |
| NspI | RCATGY | 2 cut(s) | 452, 788 |
| PaeI | GCATGC | 2 cut(s) | 452, 788 |
| PagI | TCATGA | 1 cut(s) | 796 |
| PctI | GAATGC | 1 cut(s) | 971 |
| PdmI | GAANNNNTTC | 1 cut(s) | 156 |
| PfeI | GAWTC | 1 cut(s) | 890 |
| PkrI | GCNGC | 4 cut(s) | 319, 943, 1011, 1348 |
| PleI | GAGTC | 3 cut(s) | 764, 1138, 1330 |
| PmaCI | CACGTG | 1 cut(s) | 1217 |
| PmlI | CACGTG | 1 cut(s) | 1217 |
| PpsI | GAGTC | 3 cut(s) | 764, 1138, 1330 |
| Ppu21I | YACGTR | 1 cut(s) | 1217 |
| PshBI | ATTAAT | 1 cut(s) | 51 |
| PspCI | CACGTG | 1 cut(s) | 1217 |
| PspFI | CCCAGC | 1 cut(s) | 362 |
| RsaI | GTAC | 4 cut(s) | 221, 678, 863, 1098 |
| RsaNI | GTAC | 4 cut(s) | 220, 677, 862, 1097 |
| RseI | CAYNNNNRTG | 2 cut(s) | 249, 1029 |
| SaqAI | TTAA | 8 cut(s) | 51, 471, 612, 705, 764, 837, 1182, 1298 |
| SatI | GCNGC | 4 cut(s) | 318, 942, 1010, 1347 |
| Sau3AI | GATC | 2 cut(s) | 36, 286 |
| SchI | GAGTC | 3 cut(s) | 764, 1139, 1331 |
| SduI | GDGCHC | 1 cut(s) | 1180 |
| SfaNI | GCATC | 5 cut(s) | 54, 101, 191, 629, 937 |
| SfcI | CTRYAG | 1 cut(s) | 1116 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 249, 1029 |
| SmlI | CTYRAG | 4 cut(s) | 11, 29, 470, 836 |
| SmoI | CTYRAG | 4 cut(s) | 11, 29, 470, 836 |
| SphI | GCATGC | 2 cut(s) | 452, 788 |
| SsiI | CCGC | 1 cut(s) | 204 |
| SspI | AATATT | 1 cut(s) | 603 |
| SspMI | CTAG | 6 cut(s) | 170, 224, 279, 453, 482, 495 |
| StyI | CCWWGG | 3 cut(s) | 223, 1004, 1013 |
| TaaI | ACNGT | 2 cut(s) | 1120, 1195 |
| TaiI | ACGT | 1 cut(s) | 1219 |
| TatI | WGTACW | 3 cut(s) | 676, 861, 1096 |
| TfiI | GAWTC | 1 cut(s) | 890 |
| Tru1I | TTAA | 8 cut(s) | 51, 471, 612, 705, 764, 837, 1182, 1298 |
| Tru9I | TTAA | 8 cut(s) | 51, 471, 612, 705, 764, 837, 1182, 1298 |
| TscAI | CASTG | 2 cut(s) | 427, 565 |
| TseFI | GTSAC | 1 cut(s) | 767 |
| TseI | GCWGC | 4 cut(s) | 317, 941, 1009, 1346 |
| Tsp45I | GTSAC | 1 cut(s) | 767 |
| TspDTI | ATGAA | 7 cut(s) | 455, 476, 785, 863, 881, 1014, 1238 |
| TspRI | CASTG | 2 cut(s) | 427, 565 |
| Vha464I | CTTAAG | 2 cut(s) | 470, 836 |
| VneI | GTGCAC | 1 cut(s) | 1176 |
| VspI | ATTAAT | 1 cut(s) | 51 |
| XapI | RAATTY | 3 cut(s) | 607, 740, 870 |
| XbaI | TCTAGA | 1 cut(s) | 169 |
| XceI | RCATGY | 2 cut(s) | 452, 788 |
| XmaJI | CCTAGG | 1 cut(s) | 223 |
| XmnI | GAANNNNTTC | 1 cut(s) | 156 |
| XspI | CTAG | 6 cut(s) | 170, 224, 279, 453, 482, 495 |
| Zsp2I | ATGCAT | 5 cut(s) | 69, 333, 450, 622, 971 |